Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq64 179 9e-40
seq61 179 9e-40
seq23 165 2e-35
>seq64
Length=816055
Score = 179 bits (198), Expect = 9e-40
Identities = 180/233 (77%), Gaps = 3/233 (1%)
Strand=Plus/Plus
Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969
|||| ||||||| | |||||||| || || | || ||||| || |||||| | ||||
Sbjct 728490 AGGTCAAAATGC---AGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGG 728546
Query 177970 TGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCC 178029
| || || ||||||||||| |||||||| ||||| || ||||||||||||||||
Sbjct 728547 TCGAGTCTTCCGACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCC 728606
Query 178030 CTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089
|||| ||||||||| || | ||||||||||| || || ||||| || || || || |||
Sbjct 728607 CTCCTGACCAGCAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTT 728666
Query 178090 CCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
| || || ||| |||||||||| || || ||||| | ||| ||||||| |||
Sbjct 728667 CAGACTACAACATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACTGAGA 728719
>seq61
Length=567400
Score = 179 bits (198), Expect = 9e-40
Identities = 171/219 (78%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || ||||| || |||||||| ||||| || ||| |||
Sbjct 444690 CAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGAC 444631
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| || |||||||| || ||||||||||| || |||||||||
Sbjct 444630 ACTATCGATAACGTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAGCAA 444571
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || || || || || ||||| ||||| || || ||||| ||||||| ||| |
Sbjct 444570 AGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATT 444511
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || ||||| || || ||| | ||||||||||| |||
Sbjct 444510 CAGAAGGAATCTACTCTTCATTTGGTTTTGAGACTGAGA 444472
Score = 170 bits (188), Expect = 5e-37
Identities = 169/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || ||||| || |||||||| ||||| || ||| |||
Sbjct 444918 CAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGAC 444859
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| || ||||| || || ||||||||||| || |||||||||
Sbjct 444858 ACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAGCAA 444799
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||| ||||| || || || |||||||| || || || | |||| |||||| |
Sbjct 444798 AGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAACATT 444739
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| || || || ||||||| ||||||||| | |||
Sbjct 444738 CAAAAGGAGTCGACCTTGCATCTGGTTTTGAGATTGAGA 444700
Score = 170 bits (188), Expect = 5e-37
Identities = 169/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || ||||| || |||||||| ||||| || ||| |||
Sbjct 445374 CAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGAC 445315
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| || ||||| || || |||||||||||||| |||||||||
Sbjct 445314 ACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAGCAA 445255
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || || || || || ||||| ||||| || || ||||| ||||||| ||| |
Sbjct 445254 AGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATT 445195
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| || || || |||| || ||||||||| | |||
Sbjct 445194 CAAAAGGAGTCGACCTTGCACCTGGTTTTGAGATTGAGA 445156
Score = 152 bits (168), Expect = 1e-31
Identities = 171/228 (75%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | |||||||| || ||| | || || ||||| ||||| | ||||| |||
Sbjct 445608 AAAATGC---AGATTTTCGTTAAGACTTTGACCGGCAAAACTATCACTTTAGAGGTAGAA 445552
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| ||||| ||||| || |||||| |||||||| || || ||||||||||||||
Sbjct 445551 TCTTCTGACACTATCGATAATGTCAAATCGAAGATTCAAGATAAGGAAGGAATCCCTCCT 445492
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||||||| |||| || || || || || ||||| ||||| || || ||||| |||||
Sbjct 445491 GACCAGCAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGAT 445432
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||| | || ||||| || || |||| | || ||||| | |||
Sbjct 445431 TACAACATTCAGAAAGAGTCTACCTTGCACTTGGTCCTGAGATTGAGA 445384
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || ||||| || |||||||| ||||| || ||| |||
Sbjct 445146 CAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCTGAC 445087
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || ||| || |||||||| ||||| || ||||| || || || ||
Sbjct 445086 ACTATCGATAATGTGAAATCTAAAATTCAGGATAAAGAGGGTATCCCGCCTGATCAACAG 445027
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || || || |||||||| || || ||||| | ||||| ||| |
Sbjct 445026 AGATTGATTTTCGCTGGTAAGCAACTCGAAGACGGCAGAACTCTGTCTGATTACAACATT 444967
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||||| || || |||| || || ||||| | |||
Sbjct 444966 CAGAAAGAGTCTACCTTGCACCTGGTCCTGAGATTGAGA 444928
>seq23
Length=343512
Score = 165 bits (182), Expect = 2e-35
Identities = 168/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || || || ||||||||||||||||| || |||
Sbjct 313027 CAAATCTTCGTCAAGACCCTGACCGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGAC 313086
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || |||||||| || |||||||||
Sbjct 313087 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCTGACCAGCAA 313146
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || ||||| || || |||||||| || || || |||||| | || || ||| ||
Sbjct 313147 AGACTGATTTTCGCTGGTAAGCAGCTCGAGGACGGCAGAACTCTTTCTGACTACAACATC 313206
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || || || || |||| || || | ||||| |||
Sbjct 313207 CAGAAGGAGTCCACTTTGCACCTGGTCCTCAGACTGAGA 313245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730182094804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |