Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F000787595.1_202014-10-10]
66 sequences; 8,893,565 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq23 114 1e-20
seq64 89.7 5e-13
seq61 87.8 2e-12
>seq23
Length=343512
Score = 114 bits (126), Expect = 1e-20
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| |||| ||| ||||||||| ||||| ||||| || || || | |||| |||
Sbjct 313232 ACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCG 313173
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|||||||| || ||||| ||||| | || ||||| | || | | |||||||||| |
Sbjct 313172 AGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATTCCCTCCTTGTCCTGG 313113
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
|| || ||| ||| | | | |||||| ||||||||||| | || || || ||
Sbjct 313112 ATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTT 313054
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| ||||| ||||| ||||| || |||||
Sbjct 313053 ACCGGTCAGGGTCTTGACGAAGATTTGCAT 313024
>seq64
Length=816055
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/217 (70%), Gaps = 10/217 (5%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|||| ||||| ||| ||| || || ||||| ||||| || ||||| | |||| |||
Sbjct 728706 ACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAAAGGGTTCTGCCGTCCTCG 728647
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|| ||||| |||||||| |||| | || ||||| | || | | || ||||| |
Sbjct 728646 AGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGGATTCCTTCTTTGTCTTGG 728587
Query 41774 ATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828
|| || ||| | | | ||| | |||||| ||||| ||||||| || || |
Sbjct 728586 ATCTTGGACTTGACGTTATCGATG-----GTGTCGGAAGACTCGACCTCCAAGGTGATGG 728532
Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
| || || |||| ||||| |||||||||||||| ||
Sbjct 728531 TCTTTCCGGTCAAGGTCTTGACGAAAATCTGCATTTT 728495
>seq61
Length=567400
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/215 (70%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
|| |||||||||| || |||||| ||||||||||||||||| | || | ||||
Sbjct 444710 AAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGATAACGTTCTACCGTCT 444769
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
||||| ||||| || ||||| || || | || ||||| | ||| | | ||||| | |
Sbjct 444770 TCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTAT-C 444828
Query 41771 ATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATC 41827
||| |||| | ||| || || | |||||| ||||| ||||| | || ||
Sbjct 444829 TTGAATTTTGGACTTGACATTATCG--ATAGTGTCAGAGGACTCAACCTCAAGGGTGATG 444886
Query 41828 GTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || |||| || || |||||||| |||||
Sbjct 444887 GTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 444921
Score = 82.4 bits (90), Expect = 7e-11
Identities = 149/212 (70%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| |||| || ||| ||||||||||| || || || || || | |||| |||
Sbjct 444941 ACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCAGACAGAGTTCTGCCGTCTTCG 445000
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGGA-ACGCTCTCCTTGTCCA 41771
|| ||||| || ||||| |||| | |||||| || |||||| || |||| || |||
Sbjct 445001 AGTTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGCGGGATACCCTCT--TTATCC- 445057
Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830
||| |||| | || || | | |||||| ||||| ||||| | || || ||
Sbjct 445058 TGAATTTTAGATTTCACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTC 445117
Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || |||| || || |||||||| |||||
Sbjct 445118 TTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303618599200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |