Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1 100 6e-16 seq7 93.3 9e-14 >seq1 Length=1541475 Score = 100 bits (110), Expect = 6e-16 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 319806 GGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCC 319865 ||| ||||| | ||||| || || || ||||| | | | || || ||||| || Sbjct 485000 GGAACCGTCAATGTCGTGCTCAACATAGACAGTTCTACATTCTTCTTGAGTTGGGAAACC 484941 Query 319866 TTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCC 319925 ||| | || ||||| ||||||| | |||||| || || ||||| || |||||||| || Sbjct 484940 TTCGACTTGACCGTTGGCAATAGCCCTCATCAGAGTAGACTTACCAGCACCGTTTGGACC 484881 Query 319926 ACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTT 319985 || |||||||| | | | | |||| | | | || ||||||| | || || Sbjct 484880 GCAAAGACCGTATCTTCTAGCTCTCTTCAATCTAAGTTGAGTCTTGTTCAATAAGATCTT 484821 Query 319986 TCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 ||||||| |||||||| || ||||| | ||| ||||||||||| Sbjct 484820 GGCACCATAAGCCAGAGAGAACTCACAGTTACAGAGATCCTCACC 484776 >seq7 Length=988507 Score = 93.3 bits (102), Expect = 9e-14 Identities = 184/269 (68%), Gaps = 5/269 (2%) Strand=Plus/Plus Query 319402 TTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGG 319461 || || |||||||||| || |||||||| | | ||| || ||| ||| || || Sbjct 786322 TTGACAAACTCGGACAAGTTGCCCTTGTAGTACACCAGTTTCTTGTT---TTCATAGTGT 786378 Query 319462 ATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAA 319521 || | ||||| |||| ||| | || || || ||||| || ||||||| ||| Sbjct 786379 ATGACGTCAGTGCAGACAGTGTCCAAAAATCCAGAATCGTGCGAAACAATCAGAGACGTG 786438 Query 319522 ACGTCCTTAAGGTTGATCAGGTATTCAATCAA-CCACCTCACGTTAGACACAGAAAGATG 319580 | || | | | | ||||| || |||| ||| |||| || || ||| ||||| Sbjct 786439 ATATCTGTGTGCTGAACTAGGTAATCT-TCAAGCCATTTCACATTGGAAACATCCAGATG 786497 Query 319581 GTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 319640 |||||| |||||||| |||||||| | | || |||| ||||| || | ||||| | Sbjct 786498 GTTGGTTGGCTCGTCGAGAAGCAGAACGTCAGCCTTCATAAGCATGGCTCTCGCAAGTTC 786557 Query 319641 GAGTTTCATTTTCCACCCTCCGGAAAGAG 319669 || ||||| ||||| ||||| || |||| Sbjct 786558 AAGCTTCATCTTCCATCCTCCTGAGAGAG 786586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823905126410