Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq2 196 6e-45
seq4 181 1e-40
seq3 104 3e-17
>seq2
Length=1516309
Score = 196 bits (216), Expect = 6e-45
Identities = 443/663 (67%), Gaps = 6/663 (1%)
Strand=Plus/Plus
Query 54004 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 54063
|| || |||||| ||| | || |||| | ||| || || || |||||||| || ||
Sbjct 917306 CAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGC 917365
Query 54064 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 54123
|| || ||||||| ||| ||||| || || ||||| | |||| ||
Sbjct 917366 AGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAA 917425
Query 54124 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTT 54183
| | |||||| || ||||| || || | ||| | | | | |||||||| |||||
Sbjct 917426 GTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTT 917485
Query 54184 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 54243
|||||||| || | |||||| |||||||| || | ||||||| ||||||||| || ||
Sbjct 917486 GCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCC 917545
Query 54244 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 54303
||||| | || ||||| || | ||| || || ||| | ||| || |||
Sbjct 917546 GTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTG 917605
Query 54304 TAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 54363
||||| || || || || || ||||| | || || || | || ||||||||
Sbjct 917606 CAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGAT 917665
Query 54364 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 54423
||| || || || ||| ||||| || | |||||| |||||| || || ||
Sbjct 917666 GCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGG 917725
Query 54424 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483
||| || |||||||| | || || || ||||| || || |||||| || | || ||
Sbjct 917726 AGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTT 917785
Query 54484 GTACGTCTCGAT--AGCTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCAT 54540
|||||||||||| |||| | | | ||| | ||| || || | || ||||||||
Sbjct 917786 GTACGTCTCGATGACGCTGGGAATGTCATCGC---CATGGATACCAATGGCCACACGCAT 917842
Query 54541 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTC 54600
| ||||||||| ||||| || ||| || | || |||| | || || ||
Sbjct 917843 GACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTC 917902
Query 54601 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660
|| || || || |||||||||||||| |||||||||| ||||| | || | |||||
Sbjct 917903 CAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTT 917962
Query 54661 GAG 54663
||
Sbjct 917963 CAG 917965
>seq4
Length=1302532
Score = 181 bits (200), Expect = 1e-40
Identities = 413/611 (68%), Gaps = 18/611 (3%)
Strand=Plus/Plus
Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190
|| ||| || || ||| || |||||||||||||| | || || ||||| || || ||
Sbjct 920069 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 920128
Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250
|| || ||||| || || | ||| || ||||| || || || ||||| || ||||| ||
Sbjct 920129 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 920188
Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCT-----G 24305
|||||| || || || || ||||| |||| ||||| || || ||| || ||| |
Sbjct 920189 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCA-AACAGG-GCTTCCTCG 920246
Query 24306 TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 24364
|| | ||||| || || ||||| |||||||||| || | ||| || || ||||| ||
Sbjct 920247 TCGTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAAT 920305
Query 24365 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 24424
|| || || || | | ||| ||| || || || || || || |||| |||
Sbjct 920306 GGCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGA 920365
Query 24425 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTC 24484
||| ||||||| || ||||| || || || || || ||||||||||| | |||||
Sbjct 920366 GTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTC 920425
Query 24485 GGTAATCTGTACTTCTATACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCGTCA 24542
| || || || || | | || ||||| | || || || || || || |||||
Sbjct 920426 AGGAACTTGCACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATGCCGTCC 920483
Query 24543 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT-- 24599
|| ||||| || ||||| || | ||| ||| | |||| || ||| |||
Sbjct 920484 GAAGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGT-TGTCGTTGAGTCT 920542
Query 24600 -TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 24658
|| ||||| || | | || || || | ||| | ||| || | ||||| || || ||
Sbjct 920543 GTTGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGC 920602
Query 24659 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718
||||||||| || ||||| | ||| || || || || | || || || | ||||| ||
Sbjct 920603 CTCTGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCT 920662
Query 24719 ATTTGGATTTT 24729
|| |||||
Sbjct 920663 TCTTTTATTTT 920673
>seq3
Length=1363476
Score = 104 bits (114), Expect = 3e-17
Identities = 597/933 (64%), Gaps = 38/933 (4%)
Strand=Plus/Minus
Query 53704 TGCAATAGATGCCAGATTACAAACGGCTA---CCTCATTAGCATCCGCATATTGTATTAT 53760
||| | ||| | ||||| || || ||| ||||||||| || | ||||| | ||
Sbjct 659395 TGCCAAAGAGCCTAGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAACGAT 659339
Query 53761 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 53820
||| || ||||| |||||||||| || |||||||| || ||| |||||| ||
Sbjct 659338 TTCACAACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATT 659279
Query 53821 ACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGC 53880
|| || || || || || | ||| || || || ||||| |||| || ||| |||||
Sbjct 659278 GCAGGCGTCTTTGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGC 659219
Query 53881 TTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTA--TAGT 53938
| ||| | | || || | | || | || | || | ||| || | |
Sbjct 659218 ATGCCACAGTTTCTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACCTGTT 659159
Query 53939 GTATACAATCGTT-CAAACTCGTCTCCCCAAACATTGTCC---AATCCAGGACATTCATC 53994
||| || | | |||| || ||||| || |||| | ||||||| ||| |||
Sbjct 659158 GTA---AAGCTTGACAAATTCATCTCCATAAG---TGTCACTGAGTCCAGGAGATTGATC 659105
Query 53995 C--GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGA 54052
| ||| | | | |||||||| || | || ||| | |||||| | ||| ||
Sbjct 659104 CTCGGAAAAA--AGGCACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGT 659047
Query 54053 ATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC-TGTATTCTTTTT 54111
||||||||||| ||||| |||||| | | | ||| || ||||| || || | |
Sbjct 659046 ATCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTC 658987
Query 54112 AAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCC 54171
||| || |||||| | | | || | ||||||||| || || || ||| | | | ||
Sbjct 658986 AAG-TCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGCC 658928
Query 54172 AGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACAT 54231
|| | ||| ||||| || ||||| | ||| | |||||| | ||| | ||| | |||
Sbjct 658927 TGGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCAT 658868
Query 54232 TGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT 54291
|| | || || ||||||| |||||| || || || || || || || || ||
Sbjct 658867 AGGCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGAT 658808
Query 54292 ATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 54351
|| || || || || || || ||| |||||| || | ||| | | | | ||
Sbjct 658807 GTTTGAAACGTGTATGCCAATTCCGCCAGCCGCTTTAGAAATCAGGGCGGA-CTTGTGAA 658749
Query 54352 -CGTATCATAGATGCCCTCTATACTATCATCCAT-CATGTTAAGTAGAAAACAG--CTAG 54407
||| | ||||| | |||| || |||| ||| ||| ||||||||| |
Sbjct 658748 TCGTTCTGAAAATGCCATTTATAGAGTC-CCCATCCATTGCAAGAAGAAAACAGGAGGAT 658690
Query 54408 ACATTTGGTGACGACT-AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 54466
| ||| || || | || || || || || | ||||| ||||| || | || ||
Sbjct 658689 AAATTAGG---CGTTTCGGTACCGGCGTTGAACAGCGTAGGCGAAGCATGGATGAAGTAT 658633
Query 54467 TTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCT 54526
||||| || | || |||| || |||| | | |||||||| | || || || ||
Sbjct 658632 TTTTCGGACATAAGTCTGTATGTTTCGAGAACGCGGTCTATATTACCTTTGTGTATCCCA 658573
Query 54527 ACTGCGACACGCATTAACATGTGCTGAG--GTCTTTCAACGATCTTGTTGTTTATTTTCA 54584
| || || | ||| |||| | ||||| |||| ||| | |||| | ||||| |
Sbjct 658572 ATGGCCACTCTCATAAACAAATACTGAGGAGTCTCGCAA-GGTCTT-CCATCCATTTTTA 658515
Query 54585 GCAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 54617
|||| || ||| |||||| ||| | |||||||
Sbjct 658514 GCAAATATGATCTTTCCATTGTTCTGAAACCAA 658482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721548049360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |