Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq7 118 9e-22
seq2 116 3e-21
seq1 107 2e-18
>seq7
Length=988507
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||| ||||| |||| ||||||||||||||||| || ||||| ||||| |
Sbjct 50077 CCACCTCTCAGTCTGAGGACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 50136
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| ||| | ||||||| ||||| || || || |||| ||||| |||||||| ||
Sbjct 50137 AGAGTTCTGCCGTCCTCGAGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGG 50196
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| || || | | ||| || || | ||||
Sbjct 50197 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 50256
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|| | ||| || ||||| ||||| | || ||||| || |||||||||
Sbjct 50257 TCGAGGGTGATAGTCTTACCGGTCAGGGTCTTGACGAAGATTTGCATT 50304
>seq2
Length=1516309
Score = 116 bits (128), Expect = 3e-21
Identities = 165/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||| || || |||| ||||||||||||||| ||||| ||||| ||||| |
Sbjct 177337 CCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAA 177396
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| | ||||||| || || || || || | || | ||| |||||||| ||
Sbjct 177397 AGGGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGG 177456
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||| ||||| |||||| || || | ||| || || | |||
Sbjct 177457 ATTCCTTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACC 177516
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180
|||| ||| |||||||| ||||| || || ||||| || || ||||||||||
Sbjct 177517 TCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCATTTTGA 177568
>seq1
Length=1541475
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || | |||| |||||| || ||||||||||||||||||||||| |
Sbjct 445292 CCACCTCTCAATCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGAT 445351
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| |||| || || || || || || |||||||||| |||||||| |||
Sbjct 445352 AACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGG 445411
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||| || || || || || | ||| ||| ||| || |||
Sbjct 445412 ATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACC 445471
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||| ||||| || ||||| || || ||||||||
Sbjct 445472 TCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445518
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || | |||| ||||| || ||||||||||||||||| || || | |
Sbjct 445748 CCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGAC 445807
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| ||| |||| || ||||| || || ||| |||| ||||| |||||||| ||
Sbjct 445808 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 445867
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||| || || || || || | ||| ||| ||| || |||
Sbjct 445868 ATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACC 445927
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||| ||||| || ||||| || || ||||||||
Sbjct 445928 TCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422259163976012
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |