Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 9e-25
seq2 84.2 3e-11
>seq1
Length=1541475
Score = 129 bits (142), Expect = 9e-25
Identities = 172/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
|||||| || || | ||||| | || ||||||||||| ||| ||||| | ||| |
Sbjct 446203 AATGCAGATTTTCGTTAAGACTTTGACCGGCAAAACTATCACTTTAGAGGTAGAATCTTC 446144
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||| || || |||| | ||| ||| ||||||||||| ||||| || || ||||| ||
Sbjct 446143 TGACACTATCGATAATGTCAAATCGAAGATTCAAGATAAGGAAGGAATCCCTCCTGACCA 446084
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||||| || |||||||| || || || |||| || || |||| | ||||| ||
Sbjct 446083 GCAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAA 446024
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
||||| ||||| || || ||||| ||||| | | || |||||||||| ||| ||
Sbjct 446023 CATTCAGAAAGAGTCTACCTTGCACTTGGTCCTGAGATTGAGAGGTGGTATGCAAATTT 445965
Score = 120 bits (132), Expect = 5e-22
Identities = 184/260 (71%), Gaps = 3/260 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || | || || || || || || | ||| |||| | |
Sbjct 445518 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445459
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || |||| | || |||||||||||||| ||||| || || ||||| ||
Sbjct 445458 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAG 445399
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| |||||||| || || || ||| | || || || |||| ||| || |||||
Sbjct 445398 CAAAGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAAC 445339
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777
|||||||| || || || |||||| ||||||| | || |||||||||| ||| |||
Sbjct 445338 ATTCAAAAGGAGTCGACCTTGCATCTGGTTTTGAGATTGAGAGGTGGTATGCAAATTTTC 445279
Query 124778 ATAAAAA--TTGATTGTAAA 124795
| |||| |||| || |||
Sbjct 445278 GTTAAAACCTTGACTGGAAA 445259
Score = 105 bits (116), Expect = 1e-17
Identities = 166/238 (70%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || | || || || || || || | ||| |||| | |
Sbjct 445974 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445915
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || |||| | || |||||||||||||| ||||| || || ||||| ||
Sbjct 445914 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 445855
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| || |||||||| || || || |||| || || |||| | ||||| ||
Sbjct 445854 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445795
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|||||||| || || || ||||| ||||||| | || |||||||||| ||| ||
Sbjct 445794 ATTCAAAAGGAGTCGACCTTGCACCTGGTTTTGAGATTGAGAGGTGGTATGCAAATTT 445737
Score = 93.3 bits (102), Expect = 6e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|||||||| ||||| ||||| || || ||||| || ||||| || |||||||| || ||
Sbjct 445206 AAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAGCAAAGACTCATTTTTGCTGGTAAG 445147
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
|| |||| || || |||| | ||||| || ||||| || ||||| ||| | |||
Sbjct 445146 CAGCTAGAAGACGGTAGAACTCTGTCCGATTACAACATTCAGAAGGAATCTACTCTTCAT 445087
Query 124743 TTGGTTTTACGTTTACGAGGTGGT 124766
|||||||| | | ||||||||
Sbjct 445086 TTGGTTTTGAGACTGAGAGGTGGT 445063
Score = 91.5 bits (100), Expect = 2e-13
Identities = 163/238 (68%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || | || || || || || || | ||| |||| | |
Sbjct 445746 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445687
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || |||| | ||| |||||||| |||||||| ||||| || |||||||||
Sbjct 445686 GACACTATCGATAATGTGAAATCTAAAATTCAGGATAAAGAGGGTATCCCGCCTGATCAA 445627
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || | ||||| || || || ||| | || || | |||| | ||||| ||
Sbjct 445626 CAGAGATTGATTTTCGCTGGTAAGCAACTCGAAGACGGCAGAACTCTGTCTGATTACAAC 445567
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
||||| ||||| || || ||||| |||| | | || |||||||||| ||| ||
Sbjct 445566 ATTCAGAAAGAGTCTACCTTGCACCTGGTCCTGAGATTGAGAGGTGGTATGCAAATTT 445509
>seq2
Length=1516309
Score = 84.2 bits (92), Expect = 3e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|| || ||||| |||||||| || || ||||| || ||||| | || || || || ||
Sbjct 177479 AAGATCCAAGACAAAGAAGGAATCCCTCCTGACCAGCAAAGATTGATCTTCGCCGGTAAG 177420
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
||| | ||||| | |||| | ||| || || || |||||||| || |||||||||
Sbjct 177419 CAACTCGAGGACGGCAGAACCCTTTCAGACTACAACATCCAAAAAGAGTCCACTTTGCAT 177360
Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||| | | | ||||||||||
Sbjct 177359 TTGGTTCTGAGACTGAGAGGTGGTAT 177334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455933897600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |