Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq4 116 4e-21
>seq4
Length=1302532
Score = 116 bits (128), Expect = 4e-21
Identities = 348/529 (66%), Gaps = 11/529 (2%)
Strand=Plus/Plus
Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262
||| ||||| || ||| || ||||| ||||| | || | ||||| || || || |
Sbjct 920072 ACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAG 920131
Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 14322
|| ||||||| ||||| || || | ||| || || | || || || || || |||||
Sbjct 920132 ACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAA 920191
Query 14323 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGA 14382
|| ||||| || ||||||||||| | | || || ||||| |||| | | |||
Sbjct 920192 AATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAACAGGGCTTCCTCG-TCGT 920250
Query 14383 T-ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCAT 14441
| |||||| | | |||||||| | || | || ||| | || || ||||| || |
Sbjct 920251 TGATCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGGCGT 920310
Query 14442 T--AAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA-T 14498
| ||| || |||| | || |||| | ||| || || || || |||| | |
Sbjct 920311 TGAAAAGGAACTCAGCTTCCTTAGGGTCCTTG--ACGTAGGTGTCGATCAG-AAGCGAGT 920367
Query 14499 ACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG 14558
|| |||| ||||| ||||| ||||| ||||| || || || ||||| | || || |
Sbjct 920368 ACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTCAG 920427
Query 14559 ACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAG 14618
||| ||||| | | || | ||| |||| || || || || || || || ||
Sbjct 920428 GAACTTGCACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAG 920487
Query 14619 CTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGT---TTTT 14675
| ||||| || ||||| | | || ||||||| ||| | | | ||||| || |
Sbjct 920488 CAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGTTGTCGTTGAGTCTGTTGT 920547
Query 14676 TCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14724
|||| ||| | ||||| || ||||| | ||| || | ||||| ||
Sbjct 920548 TCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAA 920596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345557794760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |