Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq1 118 8e-22 >seq1 Length=1541475 Score = 118 bits (130), Expect = 8e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 ||||| | |||| ||||| || ||||| || ||||||||||| |||| || ||| || Sbjct 445073 AGTCTCAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGACAGAGTTCTA 445132 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | ||||| | || || || ||| | || |||||||| || || ||| | |||||| Sbjct 445133 CCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGGATTCCTTCC 445192 Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287 ||||| ||||| |||||| | | | ||||||| || ||| |||| |||| Sbjct 445193 TTATCCTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTG 445252 Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | || || ||||| ||||| || ||||||||||| Sbjct 445253 ATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 445290 Score = 113 bits (124), Expect = 3e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || || || ||||||||||| ||||||| | ||| ||| ||||| | ||| || || Sbjct 445322 GTCGACTCCTTTTGAATGTTATAGTCGGATAACGTTCTACCGTCTTCGAGTTGCTTACCA 445381 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248 || | ||||||||||| || || ||| | ||||||||||| ||||| |||| Sbjct 445382 GCGAAAATAAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTATCTTGAATTTTGGACTTG 445441 Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308 || | | | ||||||| || ||| |||| ||||||| | || |||||||| ||| Sbjct 445442 ACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTT 445501 Query 18309 TTTACAAAAATTTGCAT 18325 || || ||||||||||| Sbjct 445502 TTAACGAAAATTTGCAT 445518 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| | || || || |||||||||||||| |||| || ||| ||| ||||| Sbjct 445766 ACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCT 445825 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | || || || ||| | || |||||||| || || || | ||||||||||| | Sbjct 445826 AGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGA 445885 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 |||| |||||| | | | ||||||| || ||| |||| ||||||| | || Sbjct 445886 ATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTT 445945 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||||| ||||| || ||||||||||| Sbjct 445946 CCGGTCAAGGTTTTAACGAAAATTTGCAT 445974 Score = 95.1 bits (104), Expect = 9e-15 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| || |||| ||| | || || ||||| ||||||||||| |||| || ||| ||| Sbjct 445987 TCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGACAGAGTTCTACC 446046 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 ||||| | || || || ||| | || |||||||| || || || | |||||||| Sbjct 446047 GTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTT 446106 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 ||| ||| | ||||| | | | ||||||| | || || | ||||| Sbjct 446107 ATCTTGAATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTACCTCTAAAGTGAT 446166 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAA 18331 ||||||||||||| || || || ||||| ||||||||||| Sbjct 446167 AGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCATTTTTAA 446208 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| || |||| ||| | || || ||||| ||||||||||| || | || ||| | | Sbjct 445531 TCTCAGGACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCAGACAGAGTTCTGCC 445590 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 ||||| | ||| || || || | || | ||| |||||||| || | || || || Sbjct 445591 GTCTTCGAGTTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGCGGGATACCCTCTTT 445650 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 ||| ||||| || || | | | ||||||| || ||| |||| |||||| Sbjct 445651 ATCCTGAATTTTAGATTTCACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGAT 445710 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | | || |||||||| ||||| || ||||||||||| Sbjct 445711 GGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343967637215