Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq2 217 2e-51
seq4 201 1e-46
seq3 95.1 2e-14
>seq2
Length=1516309
Score = 217 bits (240), Expect = 2e-51
Identities = 604/917 (66%), Gaps = 16/917 (2%)
Strand=Plus/Plus
Query 63242 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63301
|| || |||||| ||| | || |||| | ||| || || || |||||||| || ||
Sbjct 917306 CAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGC 917365
Query 63302 TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63361
|| || ||||| | ||| ||||| || || ||||| | |||| ||
Sbjct 917366 AGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAA 917425
Query 63362 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63421
| | |||||| || ||||| || || | ||| | || | | |||||||| |||||
Sbjct 917426 GTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTT 917485
Query 63422 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63481
|||||||| || | |||||| |||||||| || | ||||||| ||||||||| || ||
Sbjct 917486 GCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCC 917545
Query 63482 GTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGA 63541
||| || | || ||||| || | ||| || || ||| | ||| || |||
Sbjct 917546 GTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTG 917605
Query 63542 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63601
||||| || || || || || ||||| | || || || | |||||||||||
Sbjct 917606 CAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGAT 917665
Query 63602 GCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGT 63661
||| || ||| || || ||||| || | |||||| |||||| || || |||
Sbjct 917666 GCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGG 917725
Query 63662 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63721
||| || |||||||| | || || || ||||| || || |||||| || | || ||
Sbjct 917726 AGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTT 917785
Query 63722 GTACGTCTCAAT--AGCTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCAT 63778
||||||||| || |||| | | | ||| | ||| || || | || ||||||||
Sbjct 917786 GTACGTCTCGATGACGCTGGGAATGTCATCGC---CATGGATACCAATGGCCACACGCAT 917842
Query 63779 TAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63838
| ||||||||| ||||| || | | ||| | || ||||| | || || ||
Sbjct 917843 GACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTC 917902
Query 63839 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898
|| || || || |||||||||||||| |||||||||| ||||| | || | || ||
Sbjct 917903 CAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTT 917962
Query 63899 GAGCTTATCCTTATATTTGTTAACTATATCCATGGTA--ATACTT--GAAATAATCGGAG 63954
|||| || | | | || |||| |||| | | | || || || || |
Sbjct 917963 CAGCTCGTCGGCGTGCTCCTGGAC--AATCC--GGTACGTTTCGTCCGAGATCATTGGCG 918018
Query 63955 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 64014
|| | || ||||| || || || | ||||| | | | | || | || | |||
Sbjct 918019 AAGGCTTGCCATTCTTGGGGTTGATATAGTGGTACAGCTGGTCAACGACCTGGGAAAACT 918078
Query 64015 GtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAAT 64074
| || | |||| |||||| || || || ||||||||||||||||| || |||| || |
Sbjct 918079 GCTTGGTGGTTTGCTTGTGCAGGTTGGAAATGGCTATTCTGGCGGCCAGGGTGGCGTAGT 918138
Query 64075 CCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACC 64133
| ||||| || || || || || || | |||||||| || | |||| || |
Sbjct 918139 CGGGATGGATCGTGGT-CATGTAAGCGGCGGTCTCGGCTGCAAGGTTATCCAGCTCGATG 918197
Query 64134 GTTGTTACTCCATTATA 64150
|| || || |||| |||
Sbjct 918198 GTGGTGACGCCATGATA 918214
>seq4
Length=1302532
Score = 201 bits (222), Expect = 1e-46
Identities = 411/600 (69%), Gaps = 18/600 (3%)
Strand=Plus/Plus
Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637
|| ||| || || ||| ||||||||||||||||| | || || ||||| || || ||
Sbjct 920069 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 920128
Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697
|| || ||||| || || | ||| || ||||| || || || || || || || || ||
Sbjct 920129 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 920188
Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT-----G 33752
||| || || || || |||||||| |||| |||||||| || ||| || ||| |
Sbjct 920189 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCA-AACAGG-GCTTCCTCG 920246
Query 33753 TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33811
|| | ||||| || || ||||| |||||||||| || | ||| || || || || ||
Sbjct 920247 TCGTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAAT 920305
Query 33812 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33871
||| || || || | | ||| ||| || || || || || ||||||| |||
Sbjct 920306 GGCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGA 920365
Query 33872 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33931
||| ||||||| || ||||| || || ||||| || ||||||||||| | |||||
Sbjct 920366 GTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTC 920425
Query 33932 GGTAATCTGCACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCATCA 33989
| || ||||| || | | | || ||||| | || || || || || || || ||
Sbjct 920426 AGGAACTTGCACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATGCCGTCC 920483
Query 33990 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT-- 34046
|| ||||| || ||||| || | ||| ||| | |||| || ||| |||
Sbjct 920484 GAAGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGT-TGTCGTTGAGTCT 920542
Query 34047 -TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 34105
|| ||||| || | | || || || | ||| | ||| || | ||||| || || ||
Sbjct 920543 GTTGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGC 920602
Query 34106 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165
||||||||| || ||||| | ||| || || || || | ||| ||||| | ||||| ||
Sbjct 920603 CTCTGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCT 920662
>seq3
Length=1363476
Score = 95.1 bits (104), Expect = 2e-14
Identities = 378/581 (65%), Gaps = 22/581 (4%)
Strand=Plus/Minus
Query 62942 TGCAACAGATGCCAGATTACACACGGCTA---CCTCATTAGCATCCGCATATTGTATTAT 62998
||| | ||| | ||||| || || ||| ||||||||| || | ||||| | ||
Sbjct 659395 TGCCAAAGAGCCTAGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAACGAT 659339
Query 62999 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63058
||| || ||||| ||||||| || || |||||||| || ||| |||||| ||
Sbjct 659338 TTCACAACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATT 659279
Query 63059 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63118
|| || || || || || | ||| || || || ||||| ||||||| ||| |||||
Sbjct 659278 GCAGGCGTCTTTGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGC 659219
Query 63119 TTTCCAGACGACTCGAGCCTTT-ATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAG 63177
| ||| | | || | |||| | | || | || | | || | ||| ||
Sbjct 659218 ATGCCACA-GTTTCTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACCTGT 659160
Query 63178 TATACAATCGTT-CGAACTCGTCTCCCCAAACATTGTCC---AATCTAGGACATTCATCC 63233
| || || | | | || || ||||| || |||| | || |||| ||| ||||
Sbjct 659159 TGTA-AAGCTTGACAAATTCATCTCCATAAG---TGTCACTGAGTCCAGGAGATTGATCC 659104
Query 63234 --GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63291
||| | | | |||||||| || | || ||| | |||||| | ||| || |
Sbjct 659103 TCGGAAAAA--AGGCACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTA 659046
Query 63292 TCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCC-TGTATTCTTTTTA 63350
|||||||||| ||||| |||||| | | | ||| || ||||| || || | | |
Sbjct 659045 TCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCA 658986
Query 63351 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63410
|| || |||||| | | | || | ||||||||| || || || ||| | | | ||
Sbjct 658985 AG-TCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGCCT 658927
Query 63411 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63470
|| | ||| ||||| || ||||| | ||| | |||||| | ||| | ||| | |||
Sbjct 658926 GGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCATA 658867
Query 63471 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATA 63511
|| | || ||||| ||| ||||||| || || || || ||
Sbjct 658866 GGCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTA 658826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817544890960
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