Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq4 192 8e-44
seq2 192 8e-44
seq3 107 3e-18
>seq4
Length=1302532
Score = 192 bits (212), Expect = 8e-44
Identities = 414/609 (68%), Gaps = 14/609 (2%)
Strand=Plus/Plus
Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213
|| ||| || || ||| || |||||||||||||| | || || ||||| || || ||
Sbjct 920069 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 920128
Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273
|| || ||||| || || | ||| || ||||| || || || ||||| || ||||| ||
Sbjct 920129 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 920188
Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--ACT-GTC 36330
|||||| || || || || ||||| |||| |||||||| || | ||| || |||
Sbjct 920189 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAACAGGGCTTCCTCGTC 920248
Query 36331 ATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 36389
| ||||| || || ||||| |||||||||| || | ||| || || ||||| || |
Sbjct 920249 GTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGG 920307
Query 36390 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 36449
| || || || | | ||| ||| || || || || || || |||| ||| |
Sbjct 920308 CGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGAGT 920367
Query 36450 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 36509
|| ||||||| || ||||| || || || || || ||||||||||| | ||||| |
Sbjct 920368 ACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTCAG 920427
Query 36510 TAATCTGTACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCGTCACT 36567
|| || || || | | | || ||||| | || || || || || || |||||
Sbjct 920428 GAACTTGCACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGA 920485
Query 36568 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGTGTTAGT---T 36623
|| ||||| || ||||| || | ||| ||| | ||||| | || | ||| |
Sbjct 920486 AGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGTTGTCGT-TGAGTCTGT 920544
Query 36624 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 36683
| ||||| || | | || || || | ||| | ||| || | ||||| || || ||||
Sbjct 920545 TGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGCCT 920604
Query 36684 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTAT 36743
||||||| || ||||| | ||| || || || || | || || || | ||||| ||
Sbjct 920605 CTGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCTTC 920664
Query 36744 TTTGATTTT 36752
||| |||||
Sbjct 920665 TTTTATTTT 920673
>seq2
Length=1516309
Score = 192 bits (212), Expect = 8e-44
Identities = 442/663 (67%), Gaps = 6/663 (1%)
Strand=Plus/Plus
Query 66035 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 66094
|| || |||||| ||| | || |||| | ||| || || || |||||||| || ||
Sbjct 917306 CAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGC 917365
Query 66095 TATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 66154
|| | ||||||| ||| ||||| || || ||||| | |||| ||
Sbjct 917366 AGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAA 917425
Query 66155 CGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 66214
| | |||||| | ||||| || || | ||| | || | | |||||||| |||||
Sbjct 917426 GTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTT 917485
Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274
|||||||| || | |||||| |||||||| || | ||||||| ||||||||| || ||
Sbjct 917486 GCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCC 917545
Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334
||||| || || ||||| || | ||| || || | | | ||| || |||
Sbjct 917546 GTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTG 917605
Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394
||||| || || || || || ||||| | || || || | || ||||||||
Sbjct 917606 CAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGAT 917665
Query 66395 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 66454
||| || || || ||| ||||| || | |||||| |||||| || || ||
Sbjct 917666 GCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGG 917725
Query 66455 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 66514
||| || |||||||| | || || || ||||| || || |||||| || | || ||
Sbjct 917726 AGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTT 917785
Query 66515 GTACGTCTCAAT--AGCTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCAT 66571
||||||||| || |||| | | | ||| | ||| || || | || ||||||||
Sbjct 917786 GTACGTCTCGATGACGCTGGGAATGTCATCGC---CATGGATACCAATGGCCACACGCAT 917842
Query 66572 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 66631
| ||||||||| ||||| || ||| || | || ||||| | || || ||
Sbjct 917843 GACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTC 917902
Query 66632 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 66691
|| || || || |||||||||||||| |||||||||| ||||| | || | |||||
Sbjct 917903 CAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTT 917962
Query 66692 GAG 66694
||
Sbjct 917963 CAG 917965
>seq3
Length=1363476
Score = 107 bits (118), Expect = 3e-18
Identities = 600/934 (64%), Gaps = 40/934 (4%)
Strand=Plus/Minus
Query 65735 TGCAACAGATGCCAGATTACAAACGGCTA---CCTCATTAGCATCCGCATATTGTATTAT 65791
||| | ||| | ||||| || || ||| ||||||||| || | ||||| | ||
Sbjct 659395 TGCCAAAGAGCCTAGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAACGAT 659339
Query 65792 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 65851
||| || ||||| |||||||||| || |||||||| || ||| |||||| ||
Sbjct 659338 TTCACAACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATT 659279
Query 65852 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 65911
|| || || || || || | ||| || || || ||||| ||||||| ||| |||||
Sbjct 659278 GCAGGCGTCTTTGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGC 659219
Query 65912 TTTCCAGACGACTCGAGCCTTT-ATTATAGATTTGTATCTCTTTTCTCTTTCGTA--TAG 65968
| ||| | | || | |||| | | || | || | || | ||| || |
Sbjct 659218 ATGCCACA-GTTTCTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACCTGT 659160
Query 65969 TGTATACAATCGTT-CGAACTCGTCTCCCCAAACATTGTCC---AATCCAGGACATTCAT 66024
|||| || | | | || || ||||| || |||| | ||||||| ||| ||
Sbjct 659159 TGTA---AAGCTTGACAAATTCATCTCCATAAG---TGTCACTGAGTCCAGGAGATTGAT 659106
Query 66025 CC--GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGG 66082
|| ||| | | | |||||||| || | || ||| | |||||| | ||| ||
Sbjct 659105 CCTCGGAAAAA--AGGCACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGG 659048
Query 66083 AATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCC-TGTATTCTTTT 66141
||||||||||| |||||||||||| | | | ||| || ||||| || || | |
Sbjct 659047 TATCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCT 658988
Query 66142 TAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTC 66201
||| || |||||| | | | || ||||||||| || || || ||| | | | |
Sbjct 658987 CAAG-TCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGC 658929
Query 66202 CAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACA 66261
| || | ||| ||||| || ||||| | ||| | |||||| | ||| | ||| | ||
Sbjct 658928 CTGGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCA 658869
Query 66262 TTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAA 66321
| || | || || |||||||||||||| || || || || || || || || |
Sbjct 658868 TAGGCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGA 658809
Query 66322 TATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTA 66381
| || || || || ||||| || ||| |||||| || | ||| | | | | |
Sbjct 658808 TGTTTGAAACGTGTATGCCAATTCCGCCAGCCGCTTTAGAAATCAGGGCGGA-CTTGTGA 658750
Query 66382 A-CGTATCATAGATGCCCTCTATACTATCATCCAT-CATGTTAAGTAGAAAACAG--CTA 66437
| ||| | ||||| | |||| || |||| ||| ||| ||||||||| |
Sbjct 658749 ATCGTTCTGAAAATGCCATTTATAGAGTC-CCCATCCATTGCAAGAAGAAAACAGGAGGA 658691
Query 66438 GACATTTGGTGACGACT-AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 66496
| ||| || || | || || || || || | ||||| ||||| || | || |
Sbjct 658690 TAAATTAGG---CGTTTCGGTACCGGCGTTGAACAGCGTAGGCGAAGCATGGATGAAGTA 658634
Query 66497 TTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC 66556
|||||| || | || |||| || || | | | |||||||| | || || || ||
Sbjct 658633 TTTTTCGGACATAAGTCTGTATGTTTCGAGAACGCGGTCTATATTACCTTTGTGTATCCC 658574
Query 66557 TACTGCGACACGCATTAACATGTGCTGAG--GTCTTTCAACGATCTTGTTGTTTATTTTC 66614
| || || | ||| |||| | ||||| |||| ||| | |||| | |||||
Sbjct 658573 AATGGCCACTCTCATAAACAAATACTGAGGAGTCTCGCAA-GGTCTT-CCATCCATTTTT 658516
Query 66615 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 66648
| ||| || ||| |||||| ||| | |||||||
Sbjct 658515 AGCAAATATGATCTTTCCATTGTTCTGAAACCAA 658482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172742409880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |