Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 4e-27
seq2 96.9 3e-15
>seq1
Length=1541475
Score = 136 bits (150), Expect = 4e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | |||||| | ||| | || ||||| ||||||||||| |||||| |
Sbjct 445748 CCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGAC 445807
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || |||||| ||||| ||||||||| | || || | |||||| || |||||
Sbjct 445808 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 445867
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||| || || ||| |||| | || | | || | ||||| | || ||| ||
Sbjct 445868 ATTCCTTCCTTATC-TTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAAC 445926
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||| ||| | ||||| |||||||| ||||| ||||| |||||||||
Sbjct 445927 CTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCATA 445975
Score = 118 bits (130), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | |||||| | || | || ||||| |||||||||||||| |||
Sbjct 445292 CCACCTCTCAATCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGAT 445351
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || ||||||||| || |||||||| | || || | |||||| || || ||
Sbjct 445352 AACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGG 445411
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||| || || ||| |||| | || | | || | ||||| | || ||| ||
Sbjct 445412 ATTCCTTCCTTATC-TTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAAC 445470
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||| ||| | ||||| |||||||| ||||| ||||| |||||||||
Sbjct 445471 CTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCATA 445519
Score = 118 bits (130), Expect = 1e-21
Identities = 147/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
||||||||||| |||||||| ||||| || || || ||||||||| || ||||||
Sbjct 445550 GTAGACTCTTTCTGAATGTTGTAATCAGACAGAGTTCTGCCGTCTTCGAGTTGCTTACCA 445609
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686
|| | |||| | || ||||| || || || || ||||| || ||| |||| | |||
Sbjct 445610 GCGAAAATCAATCTCTGTTGATCAGGCGGGATACCCTCTTTATC-CTGAATTTTAGATTT 445668
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
| | || | ||||| | || ||| ||||||| ||| | ||||| |||||||| ||
Sbjct 445669 CACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGT 445728
Query 139747 TTTTACGAATATTTGCATA 139765
||| ||||| |||||||||
Sbjct 445729 TTTAACGAAAATTTGCATA 445747
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | || || ||||| | ||||||||||| |||||||| |||||| |
Sbjct 445976 CCACCTCTCAATCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGAC 446035
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || |||||| ||||| ||||||||| | || || | |||||| || |||||
Sbjct 446036 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 446095
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||| || || ||| | || | ||| | | || | ||||| | | || ||
Sbjct 446096 ATTCCTTCCTTATC-TTGAATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTAC 446154
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| | || | || ||||||||||| || || ||||| || |||||
Sbjct 446155 CTCTAAAGTGATAGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCAT 446202
>seq2
Length=1516309
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611
|| ||| || || | || ||||||||||| ||||| || || | || || |||
Sbjct 177351 CAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAAAGGGTTCTGCCGTC 177410
Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671
||||| || ||||| || |||||| | |||||| || ||||| || |||||||||||
Sbjct 177411 CTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGGATTCCTTCTTTGTC 177470
Query 139672 GGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGT 139731
||| || || | | || | ||||||| | ||| ||||| | ||| | ||
Sbjct 177471 TTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACCTCCAAGGTGATGGT 177530
Query 139732 CTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| |||||||| || || ||||| || |||||
Sbjct 177531 CTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 177563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063956594400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |