Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq2 206 4e-48
seq4 205 1e-47
seq3 105 1e-17
>seq2
Length=1516309
Score = 206 bits (228), Expect = 4e-48
Identities = 632/967 (65%), Gaps = 14/967 (1%)
Strand=Plus/Plus
Query 79863 GAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCA 79922
||||||||| || | || ||| | || ||| ||| ||| | | || || |||
Sbjct 917255 GAACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACAGCGTCCA 917314
Query 79923 CTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 79982
||| | | | || |||| | ||| || || || |||||||| || || || ||
Sbjct 917315 CTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAG 917374
Query 79983 ATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 80042
||||||| ||| |||||| || || ||||| | |||| || | | |||
Sbjct 917375 GTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAAAAT 917434
Query 80043 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTG 80102
||| || ||||| || || | ||| | || | | || || || ||||| ||||||||
Sbjct 917435 ATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCCCTG 917494
Query 80103 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 80162
|| | |||||| |||||||| || | ||||||| ||||||||| || || ||||| ||
Sbjct 917495 GTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGT 917554
Query 80163 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTAT 80222
|| ||||| || | ||| || || ||| | ||| || ||| ||||| ||
Sbjct 917555 GCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGACCAAT 917614
Query 80223 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 80282
|| || || || ||||| | || || || | || ||||||||||| || ||
Sbjct 917615 GCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGTCGAT 917674
Query 80283 GCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGC 80342
| || || ||||| || | |||||| |||||| || || || ||| || ||
Sbjct 917675 GGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTACCGGC 917734
Query 80343 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTC 80402
|||||| | || || || ||||| || || |||||| |||| || |||||||||||
Sbjct 917735 ATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGTCTC 917794
Query 80403 AATAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAACATGTGC 80460
|| | | | | || ||| | ||| || || | || |||||||| | |||||||
Sbjct 917795 GAT-GACGCTGGGA-ATGTCATCGCCATGGATACCAATGGCCACACGCATGACCATGTGC 917852
Query 80461 TGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTA 80520
|| ||||| || ||| || || || ||||| | || || |||| || ||
Sbjct 917853 TGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTCCAGCGTCTTG 917912
Query 80521 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCC 80580
|| |||||||||||||| |||||||||| ||||| | || | ||||| || | ||
Sbjct 917913 AAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTTCAGCTCGTCG 917972
Query 80581 TTATATTTGTTAACTACATCCATGGT--GATACTT--GAAATAATCGGAGAATGTTTCCC 80636
| | | || |||| ||| | | | | || || || || ||| | || ||
Sbjct 917973 GCGTGCTCCTGGAC--AATCC--GGTACGTTTCGTCCGAGATCATTGGCGAAGGCTTGCC 918028
Query 80637 ATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGT 80696
||| || || || | ||||| | | | | || | || | ||| | || | ||
Sbjct 918029 ATTCTTGGGGTTGATATAGTGGTACAGCTGGTCAACGACCTGGGAAAACTGCTTGGTGGT 918088
Query 80697 TTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTG 80756
|| |||||| || || || | ||||||||||||||| | |||| || || |||||
Sbjct 918089 TTGCTTGTGCAGGTTGGAAATGGCTATTCTGGCGGCCAGGGTGGCGTAGTCGGGATGGAT 918148
Query 80757 TGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTC 80815
|| || || || || || | |||||||| || | |||| || | || || || |
Sbjct 918149 CGTGGT-CATGTAAGCGGCGGTCTCGGCTGCAAGGTTATCCAGCTCGATGGTGGTGACGC 918207
Query 80816 CATTATA 80822
||| |||
Sbjct 918208 CATGATA 918214
>seq4
Length=1302532
Score = 205 bits (226), Expect = 1e-47
Identities = 407/597 (68%), Gaps = 12/597 (2%)
Strand=Plus/Plus
Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015
|| ||| || || ||| ||||||||||||||||| | || | ||||| || || ||
Sbjct 920069 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 920128
Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075
|| || ||||| || || | ||| || ||||| || || || ||||| || ||||| ||
Sbjct 920129 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 920188
Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT-----G 50130
||| || || || || || ||||| ||||| |||||||| || ||| || ||| |
Sbjct 920189 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCA-AACAGG-GCTTCCTCG 920246
Query 50131 TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 50189
|| | ||||| || || ||||| |||||||||| || | ||| || || || || ||
Sbjct 920247 TCGTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAAT 920305
Query 50190 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 50249
||| || || || | | ||| ||| || || || || || ||||||| |||
Sbjct 920306 GGCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGA 920365
Query 50250 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 50309
||| ||||||| || ||||| || || ||||| || ||||||||||| | |||||
Sbjct 920366 GTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTC 920425
Query 50310 GGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACT 50369
| || ||||| || | | | || || | || || || || || || |||||
Sbjct 920426 AGGAACTTGCACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGA 920485
Query 50370 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGT---TT 50426
|| ||||| || ||||| || | ||| | | | |||||| | ||| ||
Sbjct 920486 AGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGTTGTCGTTGAGTCTGTT 920545
Query 50427 ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTC 50486
||||| || | | || || || | ||| | ||| || | ||||| || || |||||
Sbjct 920546 GTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGCCTC 920605
Query 50487 TGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543
|||||| || ||||| | ||| || || || || | ||| ||||| | ||||| ||
Sbjct 920606 TGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCT 920662
>seq3
Length=1363476
Score = 105 bits (116), Expect = 1e-17
Identities = 587/916 (64%), Gaps = 30/916 (3%)
Strand=Plus/Minus
Query 79627 AGATTACAAACGGCTA---CCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGG 79683
||||| || || ||| ||||||||| || | ||||| | |||||| |||||
Sbjct 659382 AGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAACGATTTCACAACAGAGA 659326
Query 79684 TTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 79743
|| |||| ||||| || |||||||| || ||| |||||| || || || || ||
Sbjct 659325 TTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATTGCAGGCGTCTTTG 659266
Query 79744 TAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 79803
|| || | ||| || || || ||||| ||||||| ||| ||||| | ||| | | |
Sbjct 659265 TAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGCATGCCACA-GTTT 659207
Query 79804 CGAGCCTTT-ATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTT- 79861
| | |||| | | || | || | || | ||| || ||| | ||| ||
Sbjct 659206 CTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACC-TGT-TGTAAAGCTTG 659149
Query 79862 -CGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCA--GGACACATCAACG 79918
| || || ||||| || || | ||||||| ||| || ||| | | |
Sbjct 659148 ACAAATTCATCTCCATAAGTGTCACTGAGTCCAGGAGATTGATCCTCGGAAAAA--AGGC 659091
Query 79919 ACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 79978
|||||||| ||| | || ||| | |||||| | ||| || ||||||||||| ||
Sbjct 659090 ACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTATCCAAAGAGCATAAA 659031
Query 79979 ATAGATCTCTGGTTCTATGCTCCTCGTTTCC-TGTATTCTTTTTAAGATCGAGGAACGCC 80037
||| |||||| | | | || || ||||| || || | | ||| || |||||| |
Sbjct 659030 ATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCAAG-TCCAGGAACTCA 658972
Query 80038 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCT 80097
| | || | ||||||||| || || || ||| | | | || |||| ||| |||||
Sbjct 658971 AACACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGCCTGGTCTTTTATTTCCA 658912
Query 80098 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 80157
|| ||||| | ||| | |||||| | ||| | ||| | ||| || | || || |||
Sbjct 658911 CCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCATAGGCACAAGTCCGTTG 658852
Query 80158 GATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 80217
||||||||||| || || || || || || || || || || || ||
Sbjct 658851 GATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGATGTTTGAAACGTGTATG 658792
Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCC 80276
|| ||||| || ||| |||||| || | ||| | | | | || ||| | |||||
Sbjct 658791 CCAATTCCGCCAGCCGCTTTAGAAATCAGGGCGGA-CTTGTGAATCGTTCTGAAAATGCC 658733
Query 80277 CTCTATGCTATCATCAATCATGTTAAGTAGAAAACAG--CTAGACATTTGGTGACGACT- 80333
| ||| || || ||| ||| ||||||||| | | ||| || || |
Sbjct 658732 ATTTATAGAGTCCCCATCCATTGCAAGAAGAAAACAGGAGGATAAATTAGG---CGTTTC 658676
Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393
|| || || || || | ||||| ||||| || | || ||||||| |||| || |
Sbjct 658675 GGTACCGGCGTTGAACAGCGTAGGCGAAGCATGGATGAAGTATTTTTCGGACATAAGTCT 658616
Query 80394 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAA 80453
||| || || | | | ||||||| | || || || || | || || | ||| ||
Sbjct 658615 GTATGTTTCGAGAACGCGGTCTATATTACCTTTGTGTATCCCAATGGCCACTCTCATAAA 658556
Query 80454 CATGTGCTGAG--GTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCC 80511
|| | ||||| |||| ||| | |||| || ||||| | ||| || ||| |||||
Sbjct 658555 CAAATACTGAGGAGTCTCGCAA-GGTCTT-CCATCCATTTTTAGCAAATATGATCTTTCC 658498
Query 80512 AAAGTTTTAAAACCAA 80527
| ||| | |||||||
Sbjct 658497 ATTGTTCTGAAACCAA 658482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268737151480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |