Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq2 203 4e-47
seq4 192 8e-44
seq3 116 5e-21
>seq2
Length=1516309
Score = 203 bits (224), Expect = 4e-47
Identities = 542/821 (66%), Gaps = 12/821 (1%)
Strand=Plus/Plus
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081
|||| | ||| || || || |||||||| || || || || ||||||| ||| |
Sbjct 917331 ACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAGGTCTCTGGCTCTGATC 917390
Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141
||||| || || ||||| | |||| || | | |||||| || ||||| ||
Sbjct 917391 TCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAAAATATCCGAGTGCCATGGC 917450
Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201
|| | ||| | || | | || ||||| ||||| |||||||| || | |||||| |||
Sbjct 917451 TCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCCCTGGTCGACGTATCTGGCG 917510
Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261
||||| || | ||||||| ||||||||| || || ||||| | || ||||| || | |
Sbjct 917511 GTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGTGCCGTTGGTTCCAGCG 917570
Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTA 72321
|| || || ||| | ||| ||| ||| ||||| || || || || ||
Sbjct 917571 ATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGACCAATGCCTCCAGCAGCCTTG 917630
Query 72322 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 72381
||||| | || || || | || ||||||||||| || || || ||| |||||
Sbjct 917631 GAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGTCGATGGAGTCGTCCTTCATG 917690
Query 72382 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 72441
|| | |||||| |||||| || || || ||| || |||||||| | || ||
Sbjct 917691 GCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTACCGGCATTAAACAGAGTTGGC 917750
Query 72442 GAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATA 72501
|| ||||| || || |||||| |||| || ||||||||||| || | | | | |
Sbjct 917751 GACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGTCTCGAT-GACGCTGGGA-A 917808
Query 72502 TCCCATTG--ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGA 72559
| ||| | ||| || || | || |||||||| | ||| ||||| ||||| || |||
Sbjct 917809 TGTCATCGCCATGGATACCAATGGCCACACGCATGACCATGTGCTGGGGTCTCTCGGCGA 917868
Query 72560 TCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 72619
|| || || ||||| | || || |||| || || || |||||||||||||
Sbjct 917869 CTTTTCCATCAATCTTCAAGAGATATGACCGCTCCAGCGTCTTGAAGCCAAAATAGTTGT 917928
Query 72620 ATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTA 72679
| |||||||||| ||||| | || | || || || | || | | | ||
Sbjct 917929 ACGAAAAGTCTCTATCGTACACTATGGCAGAGTTCAGCTCGTCGGCGTGCTCCTGGAC-- 917986
Query 72680 TATCCATGGT--GATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACA 72735
|||| ||| | | | | || || || || ||| | || ||||| || || || | |
Sbjct 917987 AATCC--GGTACGTTTCGTCCGAGATCATTGGCGAAGGCTTGCCATTCTTGGGGTTGATA 918044
Query 72736 TAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTT 72795
|||| | | | | || | || | ||| | || | |||| |||||| || ||
Sbjct 918045 TAGTGGTACAGCTGGTCAACGACCTGGGAAAACTGCTTGGTGGTTTGCTTGTGCAGGTTG 918104
Query 72796 GATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
|| | ||||||||||||||| || |||| || || |||||
Sbjct 918105 GAAATGGCTATTCTGGCGGCCAGGGTGGCGTAGTCGGGATG 918145
>seq4
Length=1302532
Score = 192 bits (212), Expect = 8e-44
Identities = 404/595 (68%), Gaps = 8/595 (1%)
Strand=Plus/Plus
Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120
|| ||| || || ||| ||||||||||| ||||| | || || ||||| || || ||
Sbjct 920069 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 920128
Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180
|| || ||||| || || | ||| || ||||| || || || ||||| || ||||| ||
Sbjct 920129 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 920188
Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--ACT-GTC 42237
||| || || || || || ||||| |||| |||||||| || | ||| || |||
Sbjct 920189 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAACAGGGCTTCCTCGTC 920248
Query 42238 ATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 42296
| ||||| || || ||||| |||||||||| || | ||| || || || || ||||
Sbjct 920249 GTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGG 920307
Query 42297 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTAT 42356
| || || || | | ||| ||| || || || || || ||||||| ||| |
Sbjct 920308 CGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGAGT 920367
Query 42357 ACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGG 42416
|| |||| || || ||||| || || ||||| || ||||||||||| ||||||| |
Sbjct 920368 ACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTCAG 920427
Query 42417 TAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGG 42476
||| || || || | | | || || | || || ||||| || || ||||| |
Sbjct 920428 GAACTTGCACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAG 920487
Query 42477 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--CCGGTG-TTAATTTAT 42533
| ||||| || ||||| || | ||| ||| | |||| || || | || |
Sbjct 920488 CAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGTTGTCGTTGAGTCTGTTGT 920547
Query 42534 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTG 42593
|||| || | | || || || | ||| | ||| ||| | ||||| || || || ||||
Sbjct 920548 TCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGCCTCTG 920607
Query 42594 CCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCT 42648
|||| || ||||| | ||| || || || || | || ||||| | ||||| ||
Sbjct 920608 CCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCT 920662
>seq3
Length=1363476
Score = 116 bits (128), Expect = 5e-21
Identities = 594/920 (65%), Gaps = 38/920 (4%)
Strand=Plus/Minus
Query 71710 AGATTACAAACGGCTA---CCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGA 71766
||||| || || ||| ||||||||| || | ||||| | |||||| || |||
Sbjct 659382 AGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAACGATTTCACAACAGAGA 659326
Query 71767 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 71826
|| |||||||||| || |||||||| || ||| |||||| || || || || ||
Sbjct 659325 TTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATTGCAGGCGTCTTTG 659266
Query 71827 TAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 71886
|| || | || || || || ||||| ||||||| ||| ||||| | ||| | | |
Sbjct 659265 TAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGCATGCCACA-GTTT 659207
Query 71887 CGAGCCTTT-ATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTT- 71944
| | |||| | | || | || | || | ||| || ||| | ||| ||
Sbjct 659206 CTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACC-TGT-TGTAAAGCTTG 659149
Query 71945 -CGAACTCGTCTCCCCAAGCATTGTCT---AATCCAGGACATTCAT--TCGGACACATCA 71998
| || || ||||| ||| |||| | ||||||| ||| || ||||| | | |
Sbjct 659148 ACAAATTCATCTCCATAAG---TGTCACTGAGTCCAGGAGATTGATCCTCGGAAAAA--A 659094
Query 71999 ATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 72058
|||||||| ||| | | ||| | |||||| | ||| || |||||||||||
Sbjct 659093 GGCACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTATCCAAAGAGCAT 659034
Query 72059 TAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC-TGTATTCTTTTTAAGATCGAGGAAC 72117
||||| |||||| | | | || || ||||| || || | | ||| || ||||||
Sbjct 659033 AAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCAAG-TCCAGGAAC 658975
Query 72118 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTT 72177
| | | || | ||||||||| || || || ||| | | | || || | ||| |||
Sbjct 658974 TCAAACACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGCCTGGTCTTTTATTT 658915
Query 72178 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 72237
|| || ||||| | ||| | |||||| | ||| | ||| | ||| || | || ||
Sbjct 658914 CCACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCATAGGCACAAGTCCG 658855
Query 72238 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT 72297
||||||| |||||| || || || || || || || || || || || |
Sbjct 658854 TTGGATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGATGTTTGAAACGTGT 658795
Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGAT 72356
| || ||||| || ||| |||||| || | ||| | | | | || ||| | ||
Sbjct 658794 ATGCCAATTCCGCCAGCCGCTTTAGAAATCAGGGCGGA-CTTGTGAATCGTTCTGAAAAT 658736
Query 72357 GCCCTCTATACTATCATCCAT-CATGTTAAGTAGAAAACAG--CTAGACATTTGGTGACG 72413
||| | |||| || |||| ||| ||| ||||||||| | | ||| || ||
Sbjct 658735 GCCATTTATAGAGTC-CCCATCCATTGCAAGAAGAAAACAGGAGGATAAATTAGG---CG 658680
Query 72414 ACT-AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTA 72472
| || || || || || | ||||| ||||| || | || ||||||| |||| |
Sbjct 658679 TTTCGGTACCGGCGTTGAACAGCGTAGGCGAAGCATGGATGAAGTATTTTTCGGACATAA 658620
Query 72473 GATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCA 72532
| |||| || || | | | ||||||| | || ||||| || | || || | ||
Sbjct 658619 GTCTGTATGTTTCGAGAACGCGGTCTATATTACCTTTGTGTATCCCAATGGCCACTCTCA 658560
Query 72533 TTAACATATGCTGAG--GTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTT 72590
| |||| || ||||| |||| ||| | |||| || ||||| | ||| || ||| |
Sbjct 658559 TAAACAAATACTGAGGAGTCTCGCAA-GGTCTT-CCATCCATTTTTAGCAAATATGATCT 658502
Query 72591 TTCCAAAGTTTTAAAACCAA 72610
||||| ||| | |||||||
Sbjct 658501 TTCCATTGTTCTGAAACCAA 658482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671139141275320
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