Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq4 302 7e-77
seq2 131 2e-25
seq1 127 3e-24
>seq4
Length=1302532
Score = 302 bits (334), Expect = 7e-77
Identities = 614/898 (68%), Gaps = 29/898 (3%)
Strand=Plus/Minus
Query 124983 AGTAGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCT 125042
|| || ||| | |||| || |||| ||| || || |||||| | |||||||| |||||
Sbjct 920665 AGAAGGTTTGTCTTGTTCCCTATCAAGTACCACGAGATTTGGCAGATGTACAAGAAGGCA 920606
Query 125043 CAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAG 125102
||||||| || ||||| | || || |||||||||||||||||||| |||| ||| |
Sbjct 920605 GAGGCCTCGTTCTGGACCGCAGAGGAAATCGATCTGTCCAAGGACCTGCACGACTGGAAC 920546
Query 125103 ACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGC 125162
| | | | || | ||| || | ||| | ||| | |||||||||||||| |
Sbjct 920545 AACAGACTCAACGACAACGAGAGATACTTTGTTTCGAGAGTGTTGGCCTTCTTTGCTGCT 920486
Query 125163 TCCGATGGAATCGTCAACGACAA-TCTGTTGACACGATTCTCTCAAGAGTTGACCATTCC 125221
|| || || || |||||||| || | || || | |||||| ||| || ||||
Sbjct 920485 TCGGACGGCATTGTCAACGAGAACTTGGTCGAGA-ACTTCTCTGCCGAGGTGCAAGTTCC 920427
Query 125222 AGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTA 125281
|||| ||| || ||||| ||||| |||||||| |||||| | |||||||||| |||
Sbjct 920426 TGAGGCCAAGTGTTTCTACGGGTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTA 920367
Query 125282 CTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC--ACATGCTCTTTAAC 125339
||| ||||| |||| ||| | || | | | | || | | | || || |||
Sbjct 920366 CTCGCTTCTGATCGACACCTACGTCAAGGA--CCCTAAGGAAGCTGAGTTCCTTTTCAAC 920309
Query 125340 GCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGAT 125399
|| || || || | || | ||| | ||||| |||||| || | |||||| |
Sbjct 920308 GCCATTGAGACCATCCCATGTATCAAGGAGAAGGCCGAATGGGCCATGAGATGGATCAAC 920249
Query 125400 GACGA-CAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTT 125458
||||| ||| | | || ||||| ||||| || || || || ||||| ||||| || ||
Sbjct 920248 GACGAGGAAGCCCT-GTTTGCCGAGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTT 920190
Query 125459 CTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACT 125518
||| || || ||||| | ||||| |||||||||||| | ||||| ||||| || ||
Sbjct 920189 CTTCTCTGGCTCGTTTGCCTCGATCTTCTGGCTCAAGAAGAGAGGACTGATGCCTGGTCT 920130
Query 125519 GACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCT 125578
||| | |||||||| || | |||||||||| || || ||||||||| |||
Sbjct 920129 GACCTTCTCGAACGAGTTGATCTGCAGAGACGAGGGTCTGCATACCGACTTTGCCTGTCT 920070
Query 125579 ACTGTT-TCGCAACT-ATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAAC 125636
|| || ||||| || | | | ||| | |||| || | || ||||
Sbjct 920069 GCTCTTCTCGCACCTCAACAACACCCC--------AAACAGC---GACATCGTGCTCAAG 920021
Query 125637 ATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC-TAACCGAATCCCTACCGGTCAG 125695
|| | ||||| ||||| ||| ||| ||||| | | | ||||| |||| || ||||
Sbjct 920020 ATCATCACCGAGGCCGTCGAGATCGAA-AAGAGATACTTCACCGACGCCCTGCCTGTCAA 919962
Query 125696 CATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCT 125755
| || | || ||||||||||| || |||||| ||||| | |||||||| || || || ||
Sbjct 919961 CCTGCTGGGTATGAACTGCAACCTGATGTGCCAGTACGTGGAGTTTGTTGCTGACCGGCT 919902
Query 125756 ACTGTACGAGTTGATTGGCCGCAAGA---TTTACAACGCCAAGAATCCCTTTGATTTCAT 125812
|| | | | ||| |||||| |||||||||| || || || || |||||
Sbjct 919901 GCTTT---TATCTCTGGGCTGCAAGAAGCACTACAACGCCACAAACCCGTTCGACTTCAT 919845
Query 125813 GACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870
| | ||| || || | || ||||||||||| |||||||||| ||| ||| |||
Sbjct 919844 GGAGAACATCTCTCTTGCAGGCAAGACCAACTTCTTCGAGAAGAGAGTCTCCGATTAC 919787
>seq2
Length=1516309
Score = 131 bits (144), Expect = 2e-25
Identities = 375/563 (67%), Gaps = 14/563 (2%)
Strand=Plus/Minus
Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCAC 96864
||| ||||||| ||| ||| | | |||||| | ||| ||| ||| || | ||
Sbjct 917564 AACCAACGGCACGTCCAACGGCATCATTCCAATGGTGAGAGTGTTCAACAACACCGCCA- 917506
Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924
||||||| ||||| ||||| || ||||| ||||| | || | ||| | || || |
Sbjct 917505 GATACGTCGACCAGGGAGGCAACAAGCGGCCTGGCGCGTTTGCTCTGTACGTTGAGCCAT 917446
Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984
||||| |||| |||||||||||||||| || || || ||| ||| || |||
Sbjct 917445 GGCACTCGGATATTTTTGACTTTATCGACATCCGGAAGAACCATGGTAAGGAGGAGATCA 917386
Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044
||||||| ||| |||| ||| || ||| | ||||| |||||||| || | ||| | |
Sbjct 917385 GAGCCAGAGACCTGTTCCCTGCGCTGTGGATTCCAGACCTGTTCATGGAGAGAGTCGA-G 917327
Query 97045 ACGGTGGCT-ACTGGAGCCTAATGT-GCC--CCGACTCGTCACCCGGTCTGTCCGATTGC 97100
| ||| | |||| || | | ||| |||| | | || || || |||||
Sbjct 917326 CAGAACGCTGAGTGGACGCTGTTCTCGCCTTCCGA---GGCTCCAGGGCTTTCCGACGTG 917270
Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAG 97159
| ||||| ||||| ||| ||||| ||||| | || ||||| ||| ||
Sbjct 917269 TACGGCGACGAGTTCAAGGAGCTCTACACCAGATACGAAAAGGAAGGCCGTGGACGCCAG 917210
Query 97160 ACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAA 97218
||| ||| | |||| |||| |||||| | ||||| || ||| ||| || || || |
Sbjct 917209 ACG-GTCAAGGCAC-AGAAGCTGTGGTACGCCATTTTGGAGGCCCAGACGGAAACAGGCA 917152
Query 97219 CTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCA 97278
| || | ||| || |||||||| || || ||| | |||||| || | || |
Sbjct 917151 CGCCATTCATGCTGTACAAGGACGCCTGCAACTCCAAGACCAACCAGAAGAACCTTGGTA 917092
Query 97279 CCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGG 97338
||||||| || ||| ||||| |||||||| |||||| | ||||| || ||| ||
Sbjct 917091 TCATCAAGTCGTCTAATTTGTGCTGCGAAATTGTCGAGTACTCATCTCCAGAGGAGGTGG 917032
Query 97339 CAGTTTGCGTTCTGGCATCGGTC 97361
| || || | |||| ||| ||
Sbjct 917031 CCGTGTGTAATTTGGCGTCGATC 917009
Score = 91.5 bits (100), Expect = 2e-13
Identities = 131/181 (72%), Gaps = 4/181 (2%)
Strand=Plus/Minus
Query 98046 ACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTAC 98105
|| ||||||||||||||| || | | ||||| ||||| ||||||||||| | |||
Sbjct 916303 ACCGTCTGGGAGATTCCGCAGAAAAGCATTATCGACATGGCGGCCGACAGAGGCGCGTAC 916244
Query 98106 ATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTC--GTATGA 98163
|| |||||| || ||| | ||| | || | || |||| | | | | || |||
Sbjct 916243 ATCGACCAGTCGCAGTCGATGAATATCCACCTCAA-GAACCCAACCATGGGCAAGT-TGA 916186
Query 98164 CTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAA 98223
| ||||| ||||| || | ||||| || || |||||||| ||||||||||| || ||||
Sbjct 916185 CGTCGATGCACTTCTATGGCTGGAAGAAAGGACTCAAGACCGGCATGTACTACCTCAGAA 916126
Query 98224 C 98224
|
Sbjct 916125 C 916125
>seq1
Length=1541475
Score = 127 bits (140), Expect = 3e-24
Identities = 275/406 (68%), Gaps = 4/406 (1%)
Strand=Plus/Plus
Query 69884 GACAACAACCTACCTCTGTTGACGACCAAGACTGTCTTTGTCAAGGGCGTCATCGAGGAG 69943
|||||||| || ||||| ||||| ||||| | || ||| |||| || || | | ||
Sbjct 1116101 GACAACAAACTCCCTCTATTGACAACCAAAAAGGTGTTTTTCAAAGGTATCCTTCACGAA 1116160
Query 69944 CTCTTGTGGATGATTTCCGGATCGACCAATGCCAAAGAGCTGAGCCGA-AAGGGTGTACA 70002
|| | ||| | ||| | ||| ||| ||||||| | |||| |||| ||||| || |
Sbjct 1116161 CTTCTCTGGTTTATTGCTGGAGAGACAGATGCCAAGAAACTGA-CCGAGAAGGGCGTCAA 1116219
Query 70003 CATTTGGAGCGGCAACAGTAGTCGAAGCGTTT-TGGATTCGCTCGGCTTCACCGACAGAC 70061
|| ||| || || | | || | || | | || ||||||||| | || |||| |
Sbjct 1116220 AATATGGGAAGGAAATGGATCTAGA-GAGTATCTTGACTCGCTCGGCCTGACACACAGGC 1116278
Query 70062 AAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATG 70121
|| || ||||| || ||||| ||||| ||||| ||||| |||| || | | ||||
Sbjct 1116279 GGGAAGGAGATCTCGGTCCAGTTTACGGCTTCCAATGGAGACACTTTGGGGCAGAATATG 1116338
Query 70122 TAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACA 70181
| ||| ||| |||||||| | || | ||| ||||| || | ||||||||| |
Sbjct 1116339 TCGACGCCGATACAGACTACACAGGCAAAGGTTACGATCAGCTGGCCAAAATCATTGATA 1116398
Query 70182 CTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATT 70241
|| | | ||||| || ||||| || || | || || ||||||||||| | | ||
Sbjct 1116399 CTTTGAGAACCAACCCCTACGATAGAAGAATTATTTTGAGCGCATGGAATCCTCCGGCTT 1116458
Query 70242 TGCACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTA 70287
| | | ||||| || ||||| || || ||| |||||||||
Sbjct 1116459 TCAAGGACATGGCTCTTCCACCATGCCATGTTTTCTGTCAGTTTTA 1116504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059135157320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |