Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2 113 7e-21 >seq2 Length=1516309 Score = 113 bits (124), Expect = 7e-21 Identities = 177/252 (70%), Gaps = 1/252 (0%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 ||||| ||| |||||||||||||||| ||||| |||||||| ||| | | || || | Sbjct 397670 AGATC-CTTAGAGATAACATCCAAGGTATCACTAAGCCAGCCATCAGAAGACTTGCCAGA 397728 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || ||| | | |||| || |||| |||||| | | | ||| | || Sbjct 397729 AGAGGTGGTGTTAAGAGAATTTCTGCTCTGATCTACGAAGAGGTCAGAGCTGTCCTCAAA 397788 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 ||| | ||| ||||||| |||||| | ||| || ||||||||||| | ||| Sbjct 397789 TCCTTTTTGGAGAACGTTATCAGAGATGCTGTTACCTACACAGAGCACGCTAAGAGAAAG 397848 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 || || || ||| ||||| | ||||| || ||||| | ||||| | | | |||||| Sbjct 397849 ACCGTTACTTCCTTGGATGTTGTCTACGCTTTGAAGAGACAAGGAAGAACTTTGTATGGT 397908 Query 16688 TTTGGAAGTTAA 16699 || || ||||| Sbjct 397909 TTCGGTGGTTAA 397920 Score = 87.8 bits (96), Expect = 3e-13 Identities = 174/254 (69%), Gaps = 3/254 (1%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| ||| |||||||||||||||| ||||| |||||||| ||| | | || || | Sbjct 1341104 AGAT-TCTAAGAGATAACATCCAAGGTATCACTAAGCCAGCCATCAGAAGACTTGCCAGA 1341162 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| |||||| | |||| | ||| | |||||||| | | | ||| | || Sbjct 1341163 AGAGGTGGTGTCAAGAGAATCTCCGCTTTGATTTATGAAGAAGTGAGAGCTGTGCTCAA- 1341221 Query 16568 ATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626 ||| ||||| | | ||| || |||||| | ||| || |||||||| || | || Sbjct 1341222 ATCGTTCCTTGAAAACGTGATTAGAGATGCTGTTACCTACACTGAGCACGCCAAGAGAAA 1341281 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686 ||| ||||| || |||| | || || || ||||| | || || | | | || || Sbjct 1341282 GACCGTCACATCTCTGGACGTGGTTTACGCTTTGAAGAGACAGGGTAGAACCTTGTACGG 1341341 Query 16687 TTTTGGAAGTTAAT 16700 ||| || |||||| Sbjct 1341342 TTTCGGTGGTTAAT 1341355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075193599851