Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2 113 7e-21
>seq2
Length=1516309
Score = 113 bits (124), Expect = 7e-21
Identities = 177/252 (70%), Gaps = 1/252 (0%)
Strand=Plus/Plus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
||||| ||| |||||||||||||||| ||||| |||||||| ||| | | || || |
Sbjct 397670 AGATC-CTTAGAGATAACATCCAAGGTATCACTAAGCCAGCCATCAGAAGACTTGCCAGA 397728
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || ||| | | |||| || |||| |||||| | | | ||| | ||
Sbjct 397729 AGAGGTGGTGTTAAGAGAATTTCTGCTCTGATCTACGAAGAGGTCAGAGCTGTCCTCAAA 397788
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
||| | ||| ||||||| |||||| | ||| || ||||||||||| | |||
Sbjct 397789 TCCTTTTTGGAGAACGTTATCAGAGATGCTGTTACCTACACAGAGCACGCTAAGAGAAAG 397848
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|| || || ||| ||||| | ||||| || ||||| | ||||| | | | ||||||
Sbjct 397849 ACCGTTACTTCCTTGGATGTTGTCTACGCTTTGAAGAGACAAGGAAGAACTTTGTATGGT 397908
Query 16688 TTTGGAAGTTAA 16699
|| || |||||
Sbjct 397909 TTCGGTGGTTAA 397920
Score = 87.8 bits (96), Expect = 3e-13
Identities = 174/254 (69%), Gaps = 3/254 (1%)
Strand=Plus/Plus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||| ||| |||||||||||||||| ||||| |||||||| ||| | | || || |
Sbjct 1341104 AGAT-TCTAAGAGATAACATCCAAGGTATCACTAAGCCAGCCATCAGAAGACTTGCCAGA 1341162
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| |||||| | |||| | ||| | |||||||| | | | ||| | ||
Sbjct 1341163 AGAGGTGGTGTCAAGAGAATCTCCGCTTTGATTTATGAAGAAGTGAGAGCTGTGCTCAA- 1341221
Query 16568 ATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626
||| ||||| | | ||| || |||||| | ||| || |||||||| || | ||
Sbjct 1341222 ATCGTTCCTTGAAAACGTGATTAGAGATGCTGTTACCTACACTGAGCACGCCAAGAGAAA 1341281
Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686
||| ||||| || |||| | || || || ||||| | || || | | | || ||
Sbjct 1341282 GACCGTCACATCTCTGGACGTGGTTTACGCTTTGAAGAGACAGGGTAGAACCTTGTACGG 1341341
Query 16687 TTTTGGAAGTTAAT 16700
||| || ||||||
Sbjct 1341342 TTTCGGTGGTTAAT 1341355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075193599851
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |