Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq2 208 9e-49
seq4 201 1e-46
seq3 100 4e-16
>seq2
Length=1516309
Score = 208 bits (230), Expect = 9e-49
Identities = 602/917 (66%), Gaps = 16/917 (2%)
Strand=Plus/Plus
Query 63191 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63250
|| || |||||| ||| | || |||| | ||| || || || |||||||| || ||
Sbjct 917306 CAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGC 917365
Query 63251 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310
|| || ||||||| ||| ||||| || || ||||| | |||| ||
Sbjct 917366 AGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAA 917425
Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370
| | |||||| || ||||| || || | ||| | || | | |||||||| |||||
Sbjct 917426 GTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTT 917485
Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430
|||||||| || | |||||| |||||||| || | ||||||| ||||||||| || ||
Sbjct 917486 GCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCC 917545
Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490
||| || | || ||||| || | ||| || || ||| | ||| || |||
Sbjct 917546 GTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTG 917605
Query 63491 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63550
||||| || || || || || ||||| | || || || | |||||||||||
Sbjct 917606 CAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGAT 917665
Query 63551 ACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63610
|| || ||| || || ||||| || | |||||| |||||| || || ||
Sbjct 917666 GCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGG 917725
Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670
||| || |||||||| | || || || ||||| || || |||||| || | || ||
Sbjct 917726 AGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTT 917785
Query 63671 GTACGTCTCAAT--AGCTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCAT 63727
||||||||| || |||| | | | ||| | ||| || || | || ||||||||
Sbjct 917786 GTACGTCTCGATGACGCTGGGAATGTCATCGC---CATGGATACCAATGGCCACACGCAT 917842
Query 63728 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63787
| ||||||||| ||||| || ||| || | || ||||| | || || ||
Sbjct 917843 GACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTC 917902
Query 63788 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63847
|| || || || |||||||||||||| |||||||||| ||||| | || | |||||
Sbjct 917903 CAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTT 917962
Query 63848 GAGTTTATCCTTATATTTGTTAACTATATCCATGGT--GATACTT--GAAATAATCGGAG 63903
|| | || | | | || |||| ||| | | | | || || || || |
Sbjct 917963 CAGCTCGTCGGCGTGCTCCTGGAC--AATCC--GGTACGTTTCGTCCGAGATCATTGGCG 918018
Query 63904 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 63963
|| | || ||||| || || || | ||||| | | | | || | || | |||
Sbjct 918019 AAGGCTTGCCATTCTTGGGGTTGATATAGTGGTACAGCTGGTCAACGACCTGGGAAAACT 918078
Query 63964 GtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAAT 64023
| || | |||| |||||| || || || | ||||||||||||||| || |||| || |
Sbjct 918079 GCTTGGTGGTTTGCTTGTGCAGGTTGGAAATGGCTATTCTGGCGGCCAGGGTGGCGTAGT 918138
Query 64024 CCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACC 64082
| ||||| || || || || || || | |||||||| || | |||| || |
Sbjct 918139 CGGGATGGATCGTGGT-CATGTAAGCGGCGGTCTCGGCTGCAAGGTTATCCAGCTCGATG 918197
Query 64083 GTTGTTACTCCATTATA 64099
|| || || |||| |||
Sbjct 918198 GTGGTGACGCCATGATA 918214
>seq4
Length=1302532
Score = 201 bits (222), Expect = 1e-46
Identities = 412/600 (69%), Gaps = 18/600 (3%)
Strand=Plus/Plus
Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359
|| ||| || || ||| ||||||||||||||||| | || | ||||| || || ||
Sbjct 920069 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 920128
Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419
|| || ||||| || || | ||| || ||||| || || || || || || ||||| ||
Sbjct 920129 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 920188
Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT-----G 33474
||| || || || || |||||||| |||| |||||||| || ||| || ||| |
Sbjct 920189 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCA-AACAGG-GCTTCCTCG 920246
Query 33475 TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33533
|| | ||||| || || ||||| |||||||||| || | ||| || || || || ||
Sbjct 920247 TCGTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAAT 920305
Query 33534 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33593
||| || || || | | ||| ||| || || || || || ||||||| |||
Sbjct 920306 GGCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGA 920365
Query 33594 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33653
||| ||||||| || ||||| || || ||||| || ||||||||||| | |||||
Sbjct 920366 GTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTC 920425
Query 33654 GGTAATCTGTACTTCTGTACAAAATCGTTC-CG-CCAAATTTTCATTCACTATTCCGTCA 33711
| || || || || | | | || |||| || |||| || || || || || |||||
Sbjct 920426 AGGAACTTGCACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATGCCGTCC 920483
Query 33712 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT-- 33768
|| ||||| || ||||| || | ||| ||| | |||| || ||| |||
Sbjct 920484 GAAGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGT-TGTCGTTGAGTCT 920542
Query 33769 -TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 33827
|| ||||| || | | || || || | ||| | ||| || | ||||| || || ||
Sbjct 920543 GTTGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGC 920602
Query 33828 CTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887
||||||||| || ||||| | ||| || || | || | ||| ||||| | ||||| ||
Sbjct 920603 CTCTGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCT 920662
>seq3
Length=1363476
Score = 100 bits (110), Expect = 4e-16
Identities = 331/503 (66%), Gaps = 20/503 (4%)
Strand=Plus/Minus
Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027
||||||| || || |||||||| || ||| |||||| || || || || || || || |
Sbjct 659318 ACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATTGCAGGCGTCTTTGTAGAGCA 659259
Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087
||| || || || ||||| ||||||| ||| ||||| | ||| | | || | ||
Sbjct 659258 GGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGCATGCCACA-GTTTCTGGGCT 659200
Query 63088 TT-ATTATAGATTTGTATCTCCTTTCTCTTTCGTA--TAGTGTATACAATCGTT-CGAAC 63143
|| | | || | || | | || | ||| || | |||| || | | | ||
Sbjct 659199 TTCACTTTACGGATATAGCGACCCTCACGTTCATACCTGTTGTA---AAGCTTGACAAAT 659143
Query 63144 TCGTCTCCCCAAACATTGTCC---AATCCAGGACATTCATCC--GGACACATCAACGACC 63198
|| ||||| || |||| | ||||||| ||| |||| ||| | | | |||
Sbjct 659142 TCATCTCCATAAG---TGTCACTGAGTCCAGGAGATTGATCCTCGGAAAAA--AGGCACC 659088
Query 63199 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 63258
||||| || | || ||| | |||||| | ||| || ||||||||||| |||||
Sbjct 659087 ACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTATCCAAAGAGCATAAAATA 659028
Query 63259 GATCTCTGGTTCTATGTTCCTCGTTTCC-TGTATTCTTTTTAAGATCGAGGAACGCCATA 63317
|||||| | | | ||| || ||||| || || | | ||| || |||||| | |
Sbjct 659027 AATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCAAG-TCCAGGAACTCAAAC 658969
Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377
| || | ||||||||| || || || ||| | | | || || | ||| ||||| ||
Sbjct 658968 ACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGCCTGGTCTTTTATTTCCACCT 658909
Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437
||||| | ||| | |||||| | ||| | ||| | ||| || | || ||||| |||
Sbjct 658908 TGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCATAGGCACAAGTCCGTTGGAT 658849
Query 63438 ATACCATTGGTACCGGAGATATA 63460
||||||| || || || || ||
Sbjct 658848 GTACCATTAGTTCCAGAAATGTA 658826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947145492120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |