Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2 208 9e-49 seq4 201 1e-46 seq3 100 4e-16 >seq2 Length=1516309 Score = 208 bits (230), Expect = 9e-49 Identities = 602/917 (66%), Gaps = 16/917 (2%) Strand=Plus/Plus Query 63191 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63250 || || |||||| ||| | || |||| | ||| || || || |||||||| || || Sbjct 917306 CAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGC 917365 Query 63251 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310 || || ||||||| ||| ||||| || || ||||| | |||| || Sbjct 917366 AGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAA 917425 Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370 | | |||||| || ||||| || || | ||| | || | | |||||||| ||||| Sbjct 917426 GTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTT 917485 Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 |||||||| || | |||||| |||||||| || | ||||||| ||||||||| || || Sbjct 917486 GCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCC 917545 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490 ||| || | || ||||| || | ||| || || ||| | ||| || ||| Sbjct 917546 GTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTG 917605 Query 63491 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63550 ||||| || || || || || ||||| | || || || | ||||||||||| Sbjct 917606 CAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGAT 917665 Query 63551 ACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63610 || || ||| || || ||||| || | |||||| |||||| || || || Sbjct 917666 GCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGG 917725 Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670 ||| || |||||||| | || || || ||||| || || |||||| || | || || Sbjct 917726 AGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTT 917785 Query 63671 GTACGTCTCAAT--AGCTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCAT 63727 ||||||||| || |||| | | | ||| | ||| || || | || |||||||| Sbjct 917786 GTACGTCTCGATGACGCTGGGAATGTCATCGC---CATGGATACCAATGGCCACACGCAT 917842 Query 63728 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63787 | ||||||||| ||||| || ||| || | || ||||| | || || || Sbjct 917843 GACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTC 917902 Query 63788 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63847 || || || || |||||||||||||| |||||||||| ||||| | || | ||||| Sbjct 917903 CAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTT 917962 Query 63848 GAGTTTATCCTTATATTTGTTAACTATATCCATGGT--GATACTT--GAAATAATCGGAG 63903 || | || | | | || |||| ||| | | | | || || || || | Sbjct 917963 CAGCTCGTCGGCGTGCTCCTGGAC--AATCC--GGTACGTTTCGTCCGAGATCATTGGCG 918018 Query 63904 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 63963 || | || ||||| || || || | ||||| | | | | || | || | ||| Sbjct 918019 AAGGCTTGCCATTCTTGGGGTTGATATAGTGGTACAGCTGGTCAACGACCTGGGAAAACT 918078 Query 63964 GtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAAT 64023 | || | |||| |||||| || || || | ||||||||||||||| || |||| || | Sbjct 918079 GCTTGGTGGTTTGCTTGTGCAGGTTGGAAATGGCTATTCTGGCGGCCAGGGTGGCGTAGT 918138 Query 64024 CCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACC 64082 | ||||| || || || || || || | |||||||| || | |||| || | Sbjct 918139 CGGGATGGATCGTGGT-CATGTAAGCGGCGGTCTCGGCTGCAAGGTTATCCAGCTCGATG 918197 Query 64083 GTTGTTACTCCATTATA 64099 || || || |||| ||| Sbjct 918198 GTGGTGACGCCATGATA 918214 >seq4 Length=1302532 Score = 201 bits (222), Expect = 1e-46 Identities = 412/600 (69%), Gaps = 18/600 (3%) Strand=Plus/Plus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 || ||| || || ||| ||||||||||||||||| | || | ||||| || || || Sbjct 920069 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 920128 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 || || ||||| || || | ||| || ||||| || || || || || || ||||| || Sbjct 920129 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 920188 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT-----G 33474 ||| || || || || |||||||| |||| |||||||| || ||| || ||| | Sbjct 920189 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCA-AACAGG-GCTTCCTCG 920246 Query 33475 TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33533 || | ||||| || || ||||| |||||||||| || | ||| || || || || || Sbjct 920247 TCGTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAAT 920305 Query 33534 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33593 ||| || || || | | ||| ||| || || || || || ||||||| ||| Sbjct 920306 GGCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGA 920365 Query 33594 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33653 ||| ||||||| || ||||| || || ||||| || ||||||||||| | ||||| Sbjct 920366 GTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTC 920425 Query 33654 GGTAATCTGTACTTCTGTACAAAATCGTTC-CG-CCAAATTTTCATTCACTATTCCGTCA 33711 | || || || || | | | || |||| || |||| || || || || || ||||| Sbjct 920426 AGGAACTTGCACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATGCCGTCC 920483 Query 33712 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT-- 33768 || ||||| || ||||| || | ||| ||| | |||| || ||| ||| Sbjct 920484 GAAGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGT-TGTCGTTGAGTCT 920542 Query 33769 -TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 33827 || ||||| || | | || || || | ||| | ||| || | ||||| || || || Sbjct 920543 GTTGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGC 920602 Query 33828 CTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887 ||||||||| || ||||| | ||| || || | || | ||| ||||| | ||||| || Sbjct 920603 CTCTGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCT 920662 >seq3 Length=1363476 Score = 100 bits (110), Expect = 4e-16 Identities = 331/503 (66%), Gaps = 20/503 (4%) Strand=Plus/Minus Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027 ||||||| || || |||||||| || ||| |||||| || || || || || || || | Sbjct 659318 ACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATTGCAGGCGTCTTTGTAGAGCA 659259 Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087 ||| || || || ||||| ||||||| ||| ||||| | ||| | | || | || Sbjct 659258 GGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGCATGCCACA-GTTTCTGGGCT 659200 Query 63088 TT-ATTATAGATTTGTATCTCCTTTCTCTTTCGTA--TAGTGTATACAATCGTT-CGAAC 63143 || | | || | || | | || | ||| || | |||| || | | | || Sbjct 659199 TTCACTTTACGGATATAGCGACCCTCACGTTCATACCTGTTGTA---AAGCTTGACAAAT 659143 Query 63144 TCGTCTCCCCAAACATTGTCC---AATCCAGGACATTCATCC--GGACACATCAACGACC 63198 || ||||| || |||| | ||||||| ||| |||| ||| | | | ||| Sbjct 659142 TCATCTCCATAAG---TGTCACTGAGTCCAGGAGATTGATCCTCGGAAAAA--AGGCACC 659088 Query 63199 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 63258 ||||| || | || ||| | |||||| | ||| || ||||||||||| ||||| Sbjct 659087 ACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTATCCAAAGAGCATAAAATA 659028 Query 63259 GATCTCTGGTTCTATGTTCCTCGTTTCC-TGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 |||||| | | | ||| || ||||| || || | | ||| || |||||| | | Sbjct 659027 AATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCAAG-TCCAGGAACTCAAAC 658969 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | || | ||||||||| || || || ||| | | | || || | ||| ||||| || Sbjct 658968 ACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGCCTGGTCTTTTATTTCCACCT 658909 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 ||||| | ||| | |||||| | ||| | ||| | ||| || | || ||||| ||| Sbjct 658908 TGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCATAGGCACAAGTCCGTTGGAT 658849 Query 63438 ATACCATTGGTACCGGAGATATA 63460 ||||||| || || || || || Sbjct 658848 GTACCATTAGTTCCAGAAATGTA 658826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947145492120