Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq2 239 1e-57
seq1 111 4e-19
>seq2
Length=1516309
Score = 239 bits (264), Expect = 1e-57
Identities = 592/878 (67%), Gaps = 24/878 (3%)
Strand=Plus/Minus
Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC-GC 363512
|| ||||| ||| | |||||||| || |||||||||||| || |||| | || ||
Sbjct 917857 CCCCAGCACATGGTCATGCGTGTGGCCATTGGTATCCATGGC---GATGACATTCCCAGC 917801
Query 363513 G--ATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACAA 363568
| || || || || || || | || || | ||||| ||||| |||||||
Sbjct 917800 GTCATCGAGACGTACAACCTGAT--GTCGCAAAAATTCTTCACCCACGCGTCGCCAACTC 917743
Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAAATGAAG 363627
||| ||||| || |||| | |||| ||||||||||| || |||||| | ||||||
Sbjct 917742 TGTTTAATGCCGGTACTCCTCATCCGCAGATGTCTTCCTG-TTTCTTGGTTGCCATGAAG 917684
Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687
||||| |||||||| || |||| |||||| || |||| |||||||| || |||||| |
Sbjct 917683 GACGACTCCATCGACGGCATCTATGACACCCTCAAGACCTGTGCTCTGATCTCCAAGGCT 917624
Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACATTCGC-G 363745
|| || || |||||| | || ||||| || | | ||| | |||||| ||| |
Sbjct 917623 GCTGGAGGCATTGGTCTGCACATTCACAACATTAGATCCACCGGGTC-TTACAT-CGCTG 917566
Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805
| || || || || || | |||| ||| | | ||||| |||| || || |
Sbjct 917565 GAACCAACGGCACGTCCAACGGCATCATTCCAATGGTGAGAGTGTTCAACAACACCGCCA 917506
Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865
| |||||||||||||| || ||||| || ||||||||| |||| | |||||
Sbjct 917505 GATACGTCGACCAGGGAGGCAACAAGCGGCCTGGCGCGTTTGCTCTGTACGTTGAGCCAT 917446
Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925
|| | ||||||||||| ||| | || ||||||| ||| || || ||||| |
Sbjct 917445 GGCACTCGGATATTTTTGACTTTATCGACATCCGGAAGAACCATGGTAAGGAGGAGATCA 917386
Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985
| || | || |||||| ||| || ||| || | |||| || ||| || | || || |
Sbjct 917385 GAGCCAGAGACCTGTTCCCTGCGCTGTGGATTCCAGACCTGTTCATGGAGAGAGTCGA-G 917327
Query 363986 CAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043
|| | | | | ||| | || || | || ||| |||||| |||||||| || |
Sbjct 917326 CA-GAACGCTGAGTGGACGCTGTTCTCGCCTTCCGAGGCTCCAGGGCTTTCCGACGTGTA 917268
Query 364044 GGGTGACGACT--ATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101
|| ||||| | | | |||||| || | | || ||| ||| || | || ||
Sbjct 917267 CGGCGACGAGTTCAAGGAGCTCTACACCAGA--TACGAAAAGGAAGGCCGTGGACGCCAG 917210
Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161
|| | ||||||||||| |||| ||||| |||| | |||| || ||||| ||
Sbjct 917209 ACGGTCAAGGCACAGAAGCTGTGGTACGCCATTTTGGAGGCCCAGACGGAAACAGGCACG 917150
Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221
|| | ||| ||||||| || | |||||| |||| |||||||| || |||||||||
Sbjct 917149 CCATTCATGCTGTACAAGGACGCCTGCAACTCCAAGACCAACCAGAAGAACCTTGGTATC 917090
Query 364222 ATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281
|| || | || | || ||| ||| | || ||| | |||| || ||| |||
Sbjct 917089 ATCAAGTCGTCTAATTTGTGCTGCGAAATTGTCGAGTACTCATCTCCAGAGGAGGTGGCC 917030
Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319
|| ||||| | ||||||||||| ||||| || || ||
Sbjct 917029 GTGTGTAATTTGGCGTCGATCGCCCTTCCAGCCTTCGT 916992
>seq1
Length=1541475
Score = 111 bits (122), Expect = 4e-19
Identities = 246/358 (69%), Gaps = 16/358 (4%)
Strand=Plus/Plus
Query 111363 GAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTA 111422
|||||||| ||||||||| ||| ||| |||| || |||| | | || ||
Sbjct 1116158 GAACTTCTCTGGTTTATTGCTGGAGAGACAGATGCCAAGAAACTGACCGAGAAGGGCGTC 1116217
Query 111423 AAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAAC 111482
||||| ||||| ||||||||||| | || | ||| || || | || || |||
Sbjct 1116218 AAAATATGGGAAGGAAATGGATCTAGAGAGTATCTTGACTCGCTCGGCCTGACACACAGG 1116277
Query 111483 GAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTA- 111541
||||| |||||||| ||||||||||| || |||||| | |||||||| ||||| ||
Sbjct 1116278 CGGGAAGGAGATCTCGGTCCAGTTTACGGCTTCCAATGGAGACACTTTGGGGCAGAATAT 1116337
Query 111542 --CAAAACC-ATGCACGACT-CATATGATTCACAGGGAACTGATCAATTACAGAATGTCA 111597
| | || || || |||| || | | || ||| || ||||| | || |||
Sbjct 1116338 GTCGACGCCGATACA-GACTACACAGG---CAAAGGTTAC-GATCAGCTGGCCAAAATCA 1116392
Query 111598 TTGATCAAATTAAGAA-CAACCCAACTTC--TCGTCGCATTATTATGAGTGCATGGAACC 111654
||||| | || |||| |||||| || | | | | |||||| |||| |||||||| |
Sbjct 1116393 TTGAT-ACTTTGAGAACCAACCC--CTACGATAGAAGAATTATTTTGAGCGCATGGAATC 1116449
Query 111655 CAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712
| || || | | ||||| ||||||||||| ||| || | || |||||||||||
Sbjct 1116450 CTCCGGCTTTCAAGGACATGGCTCTTCCACCATGCCATGTTTTCTGTCAGTTTTATGT 1116507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353483105474
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |