Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2 239 1e-57 seq1 111 4e-19 >seq2 Length=1516309 Score = 239 bits (264), Expect = 1e-57 Identities = 592/878 (67%), Gaps = 24/878 (3%) Strand=Plus/Minus Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC-GC 363512 || ||||| ||| | |||||||| || |||||||||||| || |||| | || || Sbjct 917857 CCCCAGCACATGGTCATGCGTGTGGCCATTGGTATCCATGGC---GATGACATTCCCAGC 917801 Query 363513 G--ATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACAA 363568 | || || || || || || | || || | ||||| ||||| ||||||| Sbjct 917800 GTCATCGAGACGTACAACCTGAT--GTCGCAAAAATTCTTCACCCACGCGTCGCCAACTC 917743 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAAATGAAG 363627 ||| ||||| || |||| | |||| ||||||||||| || |||||| | |||||| Sbjct 917742 TGTTTAATGCCGGTACTCCTCATCCGCAGATGTCTTCCTG-TTTCTTGGTTGCCATGAAG 917684 Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687 ||||| |||||||| || |||| |||||| || |||| |||||||| || |||||| | Sbjct 917683 GACGACTCCATCGACGGCATCTATGACACCCTCAAGACCTGTGCTCTGATCTCCAAGGCT 917624 Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACATTCGC-G 363745 || || || |||||| | || ||||| || | | ||| | |||||| ||| | Sbjct 917623 GCTGGAGGCATTGGTCTGCACATTCACAACATTAGATCCACCGGGTC-TTACAT-CGCTG 917566 Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805 | || || || || || | |||| ||| | | ||||| |||| || || | Sbjct 917565 GAACCAACGGCACGTCCAACGGCATCATTCCAATGGTGAGAGTGTTCAACAACACCGCCA 917506 Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865 | |||||||||||||| || ||||| || ||||||||| |||| | ||||| Sbjct 917505 GATACGTCGACCAGGGAGGCAACAAGCGGCCTGGCGCGTTTGCTCTGTACGTTGAGCCAT 917446 Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925 || | ||||||||||| ||| | || ||||||| ||| || || ||||| | Sbjct 917445 GGCACTCGGATATTTTTGACTTTATCGACATCCGGAAGAACCATGGTAAGGAGGAGATCA 917386 Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985 | || | || |||||| ||| || ||| || | |||| || ||| || | || || | Sbjct 917385 GAGCCAGAGACCTGTTCCCTGCGCTGTGGATTCCAGACCTGTTCATGGAGAGAGTCGA-G 917327 Query 363986 CAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043 || | | | | ||| | || || | || ||| |||||| |||||||| || | Sbjct 917326 CA-GAACGCTGAGTGGACGCTGTTCTCGCCTTCCGAGGCTCCAGGGCTTTCCGACGTGTA 917268 Query 364044 GGGTGACGACT--ATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101 || ||||| | | | |||||| || | | || ||| ||| || | || || Sbjct 917267 CGGCGACGAGTTCAAGGAGCTCTACACCAGA--TACGAAAAGGAAGGCCGTGGACGCCAG 917210 Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161 || | ||||||||||| |||| ||||| |||| | |||| || ||||| || Sbjct 917209 ACGGTCAAGGCACAGAAGCTGTGGTACGCCATTTTGGAGGCCCAGACGGAAACAGGCACG 917150 Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221 || | ||| ||||||| || | |||||| |||| |||||||| || ||||||||| Sbjct 917149 CCATTCATGCTGTACAAGGACGCCTGCAACTCCAAGACCAACCAGAAGAACCTTGGTATC 917090 Query 364222 ATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281 || || | || | || ||| ||| | || ||| | |||| || ||| ||| Sbjct 917089 ATCAAGTCGTCTAATTTGTGCTGCGAAATTGTCGAGTACTCATCTCCAGAGGAGGTGGCC 917030 Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 || ||||| | ||||||||||| ||||| || || || Sbjct 917029 GTGTGTAATTTGGCGTCGATCGCCCTTCCAGCCTTCGT 916992 >seq1 Length=1541475 Score = 111 bits (122), Expect = 4e-19 Identities = 246/358 (69%), Gaps = 16/358 (4%) Strand=Plus/Plus Query 111363 GAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTA 111422 |||||||| ||||||||| ||| ||| |||| || |||| | | || || Sbjct 1116158 GAACTTCTCTGGTTTATTGCTGGAGAGACAGATGCCAAGAAACTGACCGAGAAGGGCGTC 1116217 Query 111423 AAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAAC 111482 ||||| ||||| ||||||||||| | || | ||| || || | || || ||| Sbjct 1116218 AAAATATGGGAAGGAAATGGATCTAGAGAGTATCTTGACTCGCTCGGCCTGACACACAGG 1116277 Query 111483 GAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTA- 111541 ||||| |||||||| ||||||||||| || |||||| | |||||||| ||||| || Sbjct 1116278 CGGGAAGGAGATCTCGGTCCAGTTTACGGCTTCCAATGGAGACACTTTGGGGCAGAATAT 1116337 Query 111542 --CAAAACC-ATGCACGACT-CATATGATTCACAGGGAACTGATCAATTACAGAATGTCA 111597 | | || || || |||| || | | || ||| || ||||| | || ||| Sbjct 1116338 GTCGACGCCGATACA-GACTACACAGG---CAAAGGTTAC-GATCAGCTGGCCAAAATCA 1116392 Query 111598 TTGATCAAATTAAGAA-CAACCCAACTTC--TCGTCGCATTATTATGAGTGCATGGAACC 111654 ||||| | || |||| |||||| || | | | | |||||| |||| |||||||| | Sbjct 1116393 TTGAT-ACTTTGAGAACCAACCC--CTACGATAGAAGAATTATTTTGAGCGCATGGAATC 1116449 Query 111655 CAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712 | || || | | ||||| ||||||||||| ||| || | || ||||||||||| Sbjct 1116450 CTCCGGCTTTCAAGGACATGGCTCTTCCACCATGCCATGTTTTCTGTCAGTTTTATGT 1116507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353483105474