Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2 187 2e-42 seq1 122 8e-23 >seq2 Length=1516309 Score = 187 bits (206), Expect = 2e-42 Identities = 981/1538 (64%), Gaps = 55/1538 (4%) Strand=Plus/Plus Query 145049 AAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGAC 145108 |||||| | ||||||| ||| ||||| || || | || | | | || | ||| || Sbjct 916425 AAGTACGGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAGATGTTGGAG 916484 Query 145109 GTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATG 145168 ||| | || || ||| ||||||||| |||| || || | |||| ||||| ||||| Sbjct 916485 GTGTAAGGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATA 916544 Query 145169 TACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCC 145228 |||||||| | ||||| | || || | ||||| ||| |||| |||| || Sbjct 916545 GGAGCCACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCC 916604 Query 145229 CAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT-CGCT 145287 || ||||| || || ||| || | |||| | |||| |||||||||| |||| || Sbjct 916605 CAGTCCCACAGATCGGTTGGCTTCTTGCCCCAAAGGTCGAACTGCAAAATACCCTGCGAC 916664 Query 145288 GGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGC 145347 | ||| | | ||| ||||| ||| |||| | ||| |||||| | || Sbjct 916665 GCCGGCGATCCCTC-AAAGGTCTCGTATTTGCCATCCCTAACGGCCAGCTCGGCAGAGGC 916723 Query 145348 CTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATC 145407 ||||| ||| ||| || || |||||| ||| || |||| ||| | || || Sbjct 916724 CTCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCTCTGGCCTCTGG 916783 Query 145408 GCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCC 145467 || | |||| | |||| | | || | ||||| || ||||| | |||||| | Sbjct 916784 TGAGTCAAAAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGGACACCCACGGC 916843 Query 145468 GATGGGCCGATGTTTC--ATGTTGCTCATCCTCGCCGACTCGAT-AGGATATCGATTACG 145524 || |||| |||| | |||||| | || ||| || || |||||| || | Sbjct 916844 AATCGGCC--TGTTGCGCATGTTGGATGTTCTTGCCT-CTGGAACAGGATAATAGTTTCT 916900 Query 145525 GTCGATAATTTTATTCAAGTTTCGCACT-ACTACCTTTGTAATGTGCCGCAACTTTTCAA 145583 |||||| || || || | ||| | | | || ||||| || || || ||| |||||| | Sbjct 916901 GTCGATGATCTTGTTGAGGTT-CTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTTCGA 916959 Query 145584 AGTCAAACCGAGCC----TCGTCAACGACCACACAGCTATTG-----ACGGCGATCGACG 145634 ||| ||| ||| | ||| || || || | | | | ||||||||||| Sbjct 916960 AGTTGTACC-AGCTGGTATTGTCGTCGG--ACTCAACGAAGGCTGGAAGGGCGATCGACG 917016 Query 145635 CCAAATTACAAACTGCCGTCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAA 145693 |||||||||| || ||| |||||| || | | ||| | || || ||| ||||||| Sbjct 917017 CCAAATTACACACGGCCACCTCCTCTGGAGATGA-GTACTCGACAATTTCGCAGCACAAA 917075 Query 145694 TTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTG 145753 || | |||||| | || || || | ||| || | || |||||| ||||||||| Sbjct 917076 TTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTCCTTG 917135 Query 145754 TAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA----A 145809 || |||||| | || ||| || ||| ||| | ||||| ||| || | | | Sbjct 917136 TACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCA-----AAATGGCGTACCACA 917190 Query 145810 G-TCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCT 145868 | | ||| || ||| ||| | ||||| || | ||||||| | ||||||||| Sbjct 917191 GCTTCTGTGCCTTGACCGTCTGGCGTCCACGGCCTTCCTTTTCGTATCTGGTGTAGAGCT 917250 Query 145869 CCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCG 145928 ||| ||| || ||||| ||||| || || ||| || | || | | ||||| Sbjct 917251 CCTTGAACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACAGCG 917310 Query 145929 ACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACA 145988 ||| | |||| | ||| | |||||| |||| ||||| | ||||||||| | Sbjct 917311 TCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGA 917370 Query 145989 TCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGC-ACACT- 146046 || ||| | ||| || ||||| ||| ||| ||| | | || | | | | Sbjct 917371 ACAGGTCTCTGGCTCTGATCTCCTCCTTACC-ATGGTTCT-TCCGGATGTCGATAAAGTC 917428 Query 146047 ATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CC 146103 | | || |||| |||||| || |||| || | || | || || || ||| || Sbjct 917429 AAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCC 917488 Query 146104 ACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCT 146163 |||||||| |||| | | ||||||| || || | |||||| || || |||| | Sbjct 917489 TCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTT 917548 Query 146164 GGCTACGCCGTTCGT---AGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATT 146220 || |||||| || || | || | ||| ||| | | | |||| | Sbjct 917549 GGACGTGCCGTTGGTTCCAGCG---ATGTAAGACCCGGTGGATCTAATGTTGTGAATGTG 917605 Query 146221 CACGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGAT 146280 || || | || || | |||||| || || ||| ||| || || ||||| Sbjct 917606 CAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGAT 917665 Query 146281 GCCGTCAATGCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATC 146338 |||||| ||| ||| |||| ||| | | || || || || ||||||||| Sbjct 917666 GCCGTCGATGGAGTCGTCCTTC--ATGGCAACCAAGAAACAGGAAGACATCTGCGGATGA 917723 Query 146339 GGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATC 146398 || || || || |||| || || |||||| || || | |||| | ||||| Sbjct 917724 GGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGG 917783 Query 146399 CGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATG 146458 ||||| ||||| || ||||||| |||||||| || || | || || |||||| Sbjct 917784 TTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCATG 917843 Query 146459 AGCATGTGTTGGGGCCGCTCCGCCACTTGATTGTCAATCTTTAACAAATA--GCCGTTCT 146516 | |||||| ||||| | ||| || |||| |||||||| || | ||| ||| || Sbjct 917844 ACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCG--CT 917901 Query 146517 CCAGGGTTTTGTATCCGAAAAATTTGTACGTATAGTCT 146554 |||| || ||| | || ||| | ||||||| | ||||| Sbjct 917902 CCAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCT 917939 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || | ||| || ||||| | || ||||| ||||| |||||||| || Sbjct 177337 CCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAA 177396 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | |||||| || ||||| || ||| |||| || | |||||||| |||||| Sbjct 177397 AGGGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGG 177456 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||||||||| ||| || ||||| | || | || |||| ||||||| Sbjct 177457 ATTCCTTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACC 177516 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| | || || |||||||||||||| Sbjct 177517 TCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 177563 >seq1 Length=1541475 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || || | || | |||||||||||||||||||||||||||| | Sbjct 445748 CCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGAC 445807 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| ||||||||||| || || | || | | |||||||| |||||| Sbjct 445808 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 445867 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || ||||| ||||| | || | ||| || | |||||| | Sbjct 445868 ATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACC 445927 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| | ||||| |||||||| ||||| Sbjct 445928 TCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445974 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || || | ||| | ||||||||||||||||||||| || ||| Sbjct 445292 CCACCTCTCAATCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGAT 445351 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| || || ||||| || ||| | || | | |||||||| || ||| Sbjct 445352 AACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGG 445411 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || ||||| ||||| | || | ||| || | |||||| | Sbjct 445412 ATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACC 445471 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| | ||||| |||||||| ||||| Sbjct 445472 TCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445518 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | ||| || || || | ||| ||||| || ||||||||||||||| | Sbjct 445976 CCACCTCTCAATCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGAC 446035 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| ||||||||||| || || | || | | |||||||| |||||| Sbjct 446036 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 446095 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || || ||| |||| | || | ||| || | || || | Sbjct 446096 ATTCCTTCCTTATCTTGAATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTACC 446155 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||||| ||||| | ||| || |||||||||||||| Sbjct 446156 TCTAAAGTGATAGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCAT 446202 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || | || || ||||| | || || ||||| ||||||||||||||| | Sbjct 445064 CCACCTCTCAGTCTCAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGAC 445123 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| ||||||||||| || || | || | | |||||||| || ||| Sbjct 445124 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGG 445183 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || ||||| ||||| | || | ||| || | |||||| | Sbjct 445184 ATTCCTTCCTTATCCTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAACC 445243 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || | ||||| |||||||| ||||| Sbjct 445244 TCAAGGGTGATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 445290 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | ||| || | || | ||| ||||| || |||||||||||||| | Sbjct 445520 CCACCTCTCAATCTCAGGACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCAGAC 445579 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| || || ||||| || ||| | || || | ||| || || || ||| Sbjct 445580 AGAGTTCTGCCGTCTTCGAGTTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGCGGG 445639 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || ||||| || ||||| || | | || | ||| || | |||||| | Sbjct 445640 ATACCCTCTTTATCCTGAATTTTAGATTTCACATTATCGATAGTGTCAGAGGACTCAACC 445699 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| | ||||| |||||||| ||||| Sbjct 445700 TCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012758698880