Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq2 205 1e-47
seq4 185 1e-41
seq3 111 2e-19
>seq2
Length=1516309
Score = 205 bits (226), Expect = 1e-47
Identities = 445/663 (67%), Gaps = 6/663 (1%)
Strand=Plus/Plus
Query 63046 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63105
|| || |||||| ||| | || |||| | ||| || || || |||||||| || ||
Sbjct 917306 CAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGC 917365
Query 63106 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63165
|| || ||||||| ||| ||||| || || ||||| | |||| ||
Sbjct 917366 AGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAA 917425
Query 63166 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63225
| | |||||| || ||||| || || | ||| | || | | |||||||| |||||
Sbjct 917426 GTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTT 917485
Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285
|||||||| || | |||||| |||||||| || | ||||||| ||||||||| || ||
Sbjct 917486 GCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCC 917545
Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63345
||||| || || ||||| || | ||| || || ||| | ||| || |||
Sbjct 917546 GTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTG 917605
Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405
||||| || || || || || ||||| | || || || | || ||||||||
Sbjct 917606 CAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGAT 917665
Query 63406 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63465
||| || || || ||| ||||| || | |||||| |||||| || || ||
Sbjct 917666 GCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGG 917725
Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525
||| || |||||||| | || || || ||||| || || |||||| || | || ||
Sbjct 917726 AGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTT 917785
Query 63526 GTACGTCTCAAT--AGCTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCAT 63582
||||||||| || |||| | | | ||| | ||| || || | || ||||||||
Sbjct 917786 GTACGTCTCGATGACGCTGGGAATGTCATCGC---CATGGATACCAATGGCCACACGCAT 917842
Query 63583 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63642
| ||||||||| ||||| || ||| || | || ||||| | || || ||
Sbjct 917843 GACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTC 917902
Query 63643 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63702
|| || || || |||||||||||||| |||||||||| ||||| | || | |||||
Sbjct 917903 CAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTT 917962
Query 63703 GAG 63705
||
Sbjct 917963 CAG 917965
>seq4
Length=1302532
Score = 185 bits (204), Expect = 1e-41
Identities = 414/611 (68%), Gaps = 18/611 (3%)
Strand=Plus/Plus
Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716
|| ||| || || ||| || |||||||||||||| | || || ||||| || || ||
Sbjct 920069 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 920128
Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776
|| || ||||| || || | ||| || ||||| || || || ||||| || ||||| ||
Sbjct 920129 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 920188
Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT-----G 32831
|||||| || || || || ||||| |||| |||||||| || ||| || ||| |
Sbjct 920189 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCA-AACAGG-GCTTCCTCG 920246
Query 32832 TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 32890
|| | ||||| || || ||||| |||||||||| || | ||| || || ||||| ||
Sbjct 920247 TCGTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAAT 920305
Query 32891 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 32950
|| || || || | | ||| ||| || || || || || || |||| |||
Sbjct 920306 GGCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGA 920365
Query 32951 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTC 33010
||| ||||||| || ||||| || || || || || |||||||| || | |||||
Sbjct 920366 GTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTC 920425
Query 33011 GGTAATCTGTACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCGTCA 33068
| || || || || | | | || ||||| | || || || || || || |||||
Sbjct 920426 AGGAACTTGCACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATGCCGTCC 920483
Query 33069 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT-- 33125
|| ||||| || ||||| || | ||| ||| | |||| || ||| |||
Sbjct 920484 GAAGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGT-TGTCGTTGAGTCT 920542
Query 33126 -TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 33184
|| ||||| || | | || || || | ||| | ||| || | ||||| || || ||
Sbjct 920543 GTTGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGC 920602
Query 33185 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 33244
||||||||| || ||||| | ||| || || || || | || || || | ||||| ||
Sbjct 920603 CTCTGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCT 920662
Query 33245 ATTTGGATTTT 33255
|| |||||
Sbjct 920663 TCTTTTATTTT 920673
>seq3
Length=1363476
Score = 111 bits (122), Expect = 2e-19
Identities = 601/934 (64%), Gaps = 40/934 (4%)
Strand=Plus/Minus
Query 62746 TGCAACAGATGCCAGATTACAAACGGCTA---CCTCATTAGCATCCGCATATTGTATTAT 62802
||| | ||| | ||||| || || ||| ||||||||| || | ||||| | ||
Sbjct 659395 TGCCAAAGAGCCTAGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAACGAT 659339
Query 62803 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 62862
||| || ||||| |||||||||| || |||||||| || ||| |||||| ||
Sbjct 659338 TTCACAACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATT 659279
Query 62863 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 62922
|| || || || || || | ||| || || || ||||| ||||||| ||| |||||
Sbjct 659278 GCAGGCGTCTTTGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGC 659219
Query 62923 TTTCCAGACGACTCGAGCCTTT-ATTATAGATTTGTATCTCTTTTCTCTTTCGTA--TAG 62979
| ||| | | || | |||| | | || | || | || | ||| || |
Sbjct 659218 ATGCCACA-GTTTCTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACCTGT 659160
Query 62980 TGTATACAATCGTT-CGAACTCGTCTCCCCAAACATTGTCC---AGTCCAGGACATTCAT 63035
|||| || | | | || || ||||| || |||| ||||||||| ||| ||
Sbjct 659159 TGTA---AAGCTTGACAAATTCATCTCCATAAG---TGTCACTGAGTCCAGGAGATTGAT 659106
Query 63036 CC--GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGG 63093
|| ||| | | | |||||||| || | || ||| | |||||| | ||| ||
Sbjct 659105 CCTCGGAAAAA--AGGCACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGG 659048
Query 63094 AATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC-TGTATTCTTTT 63152
||||||||||| ||||| |||||| | | | ||| || ||||| || || | |
Sbjct 659047 TATCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCT 658988
Query 63153 TAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTC 63212
||| || |||||| | | | || | ||||||||| || || || ||| | | | |
Sbjct 658987 CAAG-TCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGC 658929
Query 63213 CAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACA 63272
| || | ||| ||||| || ||||| | ||| | |||||| | ||| | ||| | ||
Sbjct 658928 CTGGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCA 658869
Query 63273 TTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAA 63332
| || | || || |||||||||||||| || || || || || || || || |
Sbjct 658868 TAGGCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGA 658809
Query 63333 TATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTA 63392
| || || || || ||||| || ||| |||||| || | ||| | | | | |
Sbjct 658808 TGTTTGAAACGTGTATGCCAATTCCGCCAGCCGCTTTAGAAATCAGGGCGGA-CTTGTGA 658750
Query 63393 A-CGTATCATAGATGCCCTCTATACTATCATCCAT-CATGTTAAGTAGAAAACAG--CTA 63448
| ||| | ||||| | |||| || |||| ||| ||| ||||||||| |
Sbjct 658749 ATCGTTCTGAAAATGCCATTTATAGAGTC-CCCATCCATTGCAAGAAGAAAACAGGAGGA 658691
Query 63449 GACATTTGGTGACGACT-AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCA 63507
| ||| || || | || || || || || | ||||| ||||| || | || |
Sbjct 658690 TAAATTAGG---CGTTTCGGTACCGGCGTTGAACAGCGTAGGCGAAGCATGGATGAAGTA 658634
Query 63508 TTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC 63567
|||||| || | || |||| || || | | | |||||||| | || || || ||
Sbjct 658633 TTTTTCGGACATAAGTCTGTATGTTTCGAGAACGCGGTCTATATTACCTTTGTGTATCCC 658574
Query 63568 TACTGCGACACGCATTAACATGTGCTGAG--GTCTTTCAACGATCTTGTTGTTTATTTTC 63625
| || || | ||| |||| | ||||| |||| ||| | |||| | |||||
Sbjct 658573 AATGGCCACTCTCATAAACAAATACTGAGGAGTCTCGCAA-GGTCTT-CCATCCATTTTT 658516
Query 63626 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 63659
| ||| || ||| |||||| ||| | |||||||
Sbjct 658515 AGCAAATATGATCTTTCCATTGTTCTGAAACCAA 658482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631944557200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |