Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2 205 1e-47 seq4 185 1e-41 seq3 111 2e-19 >seq2 Length=1516309 Score = 205 bits (226), Expect = 1e-47 Identities = 445/663 (67%), Gaps = 6/663 (1%) Strand=Plus/Plus Query 63046 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63105 || || |||||| ||| | || |||| | ||| || || || |||||||| || || Sbjct 917306 CAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGC 917365 Query 63106 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63165 || || ||||||| ||| ||||| || || ||||| | |||| || Sbjct 917366 AGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAA 917425 Query 63166 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63225 | | |||||| || ||||| || || | ||| | || | | |||||||| ||||| Sbjct 917426 GTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTT 917485 Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285 |||||||| || | |||||| |||||||| || | ||||||| ||||||||| || || Sbjct 917486 GCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCC 917545 Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63345 ||||| || || ||||| || | ||| || || ||| | ||| || ||| Sbjct 917546 GTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTG 917605 Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405 ||||| || || || || || ||||| | || || || | || |||||||| Sbjct 917606 CAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGAT 917665 Query 63406 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63465 ||| || || || ||| ||||| || | |||||| |||||| || || || Sbjct 917666 GCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGG 917725 Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525 ||| || |||||||| | || || || ||||| || || |||||| || | || || Sbjct 917726 AGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTT 917785 Query 63526 GTACGTCTCAAT--AGCTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCAT 63582 ||||||||| || |||| | | | ||| | ||| || || | || |||||||| Sbjct 917786 GTACGTCTCGATGACGCTGGGAATGTCATCGC---CATGGATACCAATGGCCACACGCAT 917842 Query 63583 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63642 | ||||||||| ||||| || ||| || | || ||||| | || || || Sbjct 917843 GACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTC 917902 Query 63643 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63702 || || || || |||||||||||||| |||||||||| ||||| | || | ||||| Sbjct 917903 CAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTT 917962 Query 63703 GAG 63705 || Sbjct 917963 CAG 917965 >seq4 Length=1302532 Score = 185 bits (204), Expect = 1e-41 Identities = 414/611 (68%), Gaps = 18/611 (3%) Strand=Plus/Plus Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716 || ||| || || ||| || |||||||||||||| | || || ||||| || || || Sbjct 920069 CAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGT 920128 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776 || || ||||| || || | ||| || ||||| || || || ||||| || ||||| || Sbjct 920129 CAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAA 920188 Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT-----G 32831 |||||| || || || || ||||| |||| |||||||| || ||| || ||| | Sbjct 920189 GAAAATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCA-AACAGG-GCTTCCTCG 920246 Query 32832 TCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 32890 || | ||||| || || ||||| |||||||||| || | ||| || || ||||| || Sbjct 920247 TCGTTGATCCATCTCATG-GCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAAT 920305 Query 32891 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 32950 || || || || | | ||| ||| || || || || || || |||| ||| Sbjct 920306 GGCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGA 920365 Query 32951 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTC 33010 ||| ||||||| || ||||| || || || || || |||||||| || | ||||| Sbjct 920366 GTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTC 920425 Query 33011 GGTAATCTGTACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCGTCA 33068 | || || || || | | | || ||||| | || || || || || || ||||| Sbjct 920426 AGGAACTTGCACCTCGGCAGAGAA--GTTCTCGACCAAGTTCTCGTTGACAATGCCGTCC 920483 Query 33069 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT-- 33125 || ||||| || ||||| || | ||| ||| | |||| || ||| ||| Sbjct 920484 GAAGCAGCAAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGT-TGTCGTTGAGTCT 920542 Query 33126 -TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 33184 || ||||| || | | || || || | ||| | ||| || | ||||| || || || Sbjct 920543 GTTGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGC 920602 Query 33185 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 33244 ||||||||| || ||||| | ||| || || || || | || || || | ||||| || Sbjct 920603 CTCTGCCTTCTTGTACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAACCT 920662 Query 33245 ATTTGGATTTT 33255 || ||||| Sbjct 920663 TCTTTTATTTT 920673 >seq3 Length=1363476 Score = 111 bits (122), Expect = 2e-19 Identities = 601/934 (64%), Gaps = 40/934 (4%) Strand=Plus/Minus Query 62746 TGCAACAGATGCCAGATTACAAACGGCTA---CCTCATTAGCATCCGCATATTGTATTAT 62802 ||| | ||| | ||||| || || ||| ||||||||| || | ||||| | || Sbjct 659395 TGCCAAAGAGCCTAGATTGCAGACTGCTGTTTCCTCATTAG-AT--GAATATTCAACGAT 659339 Query 62803 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 62862 ||| || ||||| |||||||||| || |||||||| || ||| |||||| || Sbjct 659338 TTCACAACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATT 659279 Query 62863 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 62922 || || || || || || | ||| || || || ||||| ||||||| ||| ||||| Sbjct 659278 GCAGGCGTCTTTGTAGAGCAGGAAAGGGGTCCCTGTTTCCGTCTGAGAAACTAGTATCGC 659219 Query 62923 TTTCCAGACGACTCGAGCCTTT-ATTATAGATTTGTATCTCTTTTCTCTTTCGTA--TAG 62979 | ||| | | || | |||| | | || | || | || | ||| || | Sbjct 659218 ATGCCACA-GTTTCTGGGCTTTCACTTTACGGATATAGCGACCCTCACGTTCATACCTGT 659160 Query 62980 TGTATACAATCGTT-CGAACTCGTCTCCCCAAACATTGTCC---AGTCCAGGACATTCAT 63035 |||| || | | | || || ||||| || |||| ||||||||| ||| || Sbjct 659159 TGTA---AAGCTTGACAAATTCATCTCCATAAG---TGTCACTGAGTCCAGGAGATTGAT 659106 Query 63036 CC--GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGG 63093 || ||| | | | |||||||| || | || ||| | |||||| | ||| || Sbjct 659105 CCTCGGAAAAA--AGGCACCACTCTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGG 659048 Query 63094 AATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC-TGTATTCTTTT 63152 ||||||||||| ||||| |||||| | | | ||| || ||||| || || | | Sbjct 659047 TATCCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCT 658988 Query 63153 TAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTC 63212 ||| || |||||| | | | || | ||||||||| || || || ||| | | | | Sbjct 658987 CAAG-TCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGC 658929 Query 63213 CAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACA 63272 | || | ||| ||||| || ||||| | ||| | |||||| | ||| | ||| | || Sbjct 658928 CTGGTCTTTTATTTCCACCTTGATCCACGTACTTTGCGGTGCTGTTAAAGACTTGAATCA 658869 Query 63273 TTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAA 63332 | || | || || |||||||||||||| || || || || || || || || | Sbjct 658868 TAGGCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGA 658809 Query 63333 TATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTA 63392 | || || || || ||||| || ||| |||||| || | ||| | | | | | Sbjct 658808 TGTTTGAAACGTGTATGCCAATTCCGCCAGCCGCTTTAGAAATCAGGGCGGA-CTTGTGA 658750 Query 63393 A-CGTATCATAGATGCCCTCTATACTATCATCCAT-CATGTTAAGTAGAAAACAG--CTA 63448 | ||| | ||||| | |||| || |||| ||| ||| ||||||||| | Sbjct 658749 ATCGTTCTGAAAATGCCATTTATAGAGTC-CCCATCCATTGCAAGAAGAAAACAGGAGGA 658691 Query 63449 GACATTTGGTGACGACT-AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCA 63507 | ||| || || | || || || || || | ||||| ||||| || | || | Sbjct 658690 TAAATTAGG---CGTTTCGGTACCGGCGTTGAACAGCGTAGGCGAAGCATGGATGAAGTA 658634 Query 63508 TTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC 63567 |||||| || | || |||| || || | | | |||||||| | || || || || Sbjct 658633 TTTTTCGGACATAAGTCTGTATGTTTCGAGAACGCGGTCTATATTACCTTTGTGTATCCC 658574 Query 63568 TACTGCGACACGCATTAACATGTGCTGAG--GTCTTTCAACGATCTTGTTGTTTATTTTC 63625 | || || | ||| |||| | ||||| |||| ||| | |||| | ||||| Sbjct 658573 AATGGCCACTCTCATAAACAAATACTGAGGAGTCTCGCAA-GGTCTT-CCATCCATTTTT 658516 Query 63626 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 63659 | ||| || ||| |||||| ||| | ||||||| Sbjct 658515 AGCAAATATGATCTTTCCATTGTTCTGAAACCAA 658482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631944557200