Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4 212 7e-50 >seq4 Length=1302532 Score = 212 bits (234), Expect = 7e-50 Identities = 510/764 (67%), Gaps = 27/764 (4%) Strand=Plus/Plus Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986 ||||| ||||| || | |||||| |||||| | || ||||| || || || ||| Sbjct 919908 TCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTTCATACCCAGCAGGTTGACA 919967 Query 92987 GGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045 || || |||||||| ||| | ||||| ||||| | ||||| || | | ||| | | Sbjct 919968 GGCAGGGCGTCGGTGAAGTATCTCTTT-TCGATCTCGACGGCCTCGGTGATGATCTTGAG 920026 Query 93046 TACTCTA---CTATTTGGTG-GTTTTTG---TACGACATAATTGTACATTAAGCACGCAA 93098 || | || ||||| | ||| ||| | ||| | | | | | || |||| Sbjct 920027 CACGATGTCGCTGTTTGGGGTGTTGTTGAGGTGCGAGAAGA--GCAGA-----CAGGCAA 920079 Query 93099 AGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTA 93158 |||||||||| | ||| ||||||| | |||||||| || ||| || | ||| || | Sbjct 920080 AGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACCAGGCA 920139 Query 93159 ACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTT 93218 |||||||| ||||||||||| || || || ||||| ||||| || || ||||| | Sbjct 920140 TCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAATACCCT 920199 Query 93219 CCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACT----GCTGATC 93274 ||||||| ||||| || || | | |||||||| || || || | ||||| Sbjct 920200 CCACGGCAGCAAACGCAACGAGTCTCTCGGCAAA----CAGGGCTTCCTCGTCGTTGATC 920255 Query 93275 CATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAAT 93334 ||| | | ||||| ||||| || | ||| ||||| || | || || || ||||| || Sbjct 920256 CATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGGCGTTGAAA 920315 Query 93335 AGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCA 93394 ||| | || || | | || | ||| || ||||| | || || ||| |||| Sbjct 920316 AGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGAGTACGTTTCC 920375 Query 93395 GAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGC 93454 || |||| |||||||| || ||||| ||||||||||| | || || | | ||| Sbjct 920376 GAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTCAGGAACTTGC 920435 Query 93455 ACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaa 93514 || || ||| || |||| || | || || ||||| || || || || || ||||| Sbjct 920436 ACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAGCAGCAAAG 920495 Query 93515 aaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG---CTTATCCCAATCG 93571 || ||||| | | | ||| | | |||| | || || || || | ||| ||| Sbjct 920496 AAGGCCAACACTCTCGAAACAAAGTATCTCTCGTTGTCGTTGAGTCTGTTGTTCCAGTCG 920555 Query 93572 GATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTG 93631 || || || || ||||||| ||| || | ||||| ||||| || ||||| || ||| Sbjct 920556 TGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGCCTCTGCCTTCTTG 920615 Query 93632 TACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 ||||| | ||| || || || || | || || || | |||||| Sbjct 920616 TACATCTGCCAAATCTCGTGGTACTTGATAGGGAACAAGACAAA 920659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860751274680