Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4 116 8e-21 >seq4 Length=1302532 Score = 116 bits (128), Expect = 8e-21 Identities = 556/859 (65%), Gaps = 31/859 (4%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | |||||||| ||||||||||||||| ||||||||| Sbjct 919806 TCGAAGAAGTTGGTCTTGCCTGCAAGAGAGATGTTCTCCATGAAGTCGAACGGGTTTGTG 919865 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| ||||| ||| || | || | | ||||| || |||||||||| Sbjct 919866 GCGTTGTAGTGCTTCTTGCAGCCCAGAGATAAAAGCAGCCGGTCAGCAACAAACTCCACG 919925 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCA-TACGACAAGGAATTGCCTCACAGAT 251741 ||||| | |||||| | ||||||| || | || ||| ||| | || || || Sbjct 919926 TACTGGCACATCAGGTTGCAGTTCATACCCAGCAGGTTGAC-AGGCAGGGCGTCGGTGAA 919984 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTT---CAC-CTGTGCCAGAG 251797 | || ||||||| | | || ||||| | || ||| ||| ||| | | Sbjct 919985 GTATCTCTTTTCGATCTCGACGGCCTCGGTGATGAT---CTTGAGCACGATGTCGCTG-T 920040 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGG--TGCAGACCCTC 251855 | |||| | || | ||| | || || | |||| || || ||||||||||| Sbjct 920041 TTGGGGTGTTGTTGAGGTGCGAGAAGAGCAGACAGGCAAA--GTCGGTATGCAGACCCTC 920098 Query 251856 GTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 ||| | | ||| |||||||| || | ||| |||||||||| || | ||| |||| Sbjct 920099 GTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACCAGGCATCAGTCCTCTCTTCTTGAG 920158 Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAAC 251975 ||||||||| | | ||| || |||||||| | | |||||| || | | ||||| Sbjct 920159 CCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAATACCCTCCACGGCAGCAAACGCAAC 920218 Query 251976 AAGGCGCTCAGCAAAC--GACTTGTCCTGCGACAA--GAACTTCTGTGCCCATGCTGCCT 252031 || | ||| |||||| | ||| | || | | || || |||||| | |||| Sbjct 920219 GAGTCTCTCGGCAAACAGGGCTTCCTCGTCGTTGATCCATCTCATG-GCCCATTCGGCCT 920277 Query 252032 TCT--TTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGC-TCGGCAT 252088 ||| || || ||||| || || || || | || || || || || || | Sbjct 920278 TCTCCTTGATAC--ATGGGATGGTCTCAATGGCGTTGAAAAG-GAACTCAGCTTCCTTAG 920334 Query 252089 CGTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGA 252148 ||||| || | | || | ||| || |||||| | ||||| |||||| || | | Sbjct 920335 GGTCCTTGACGTAGGTGTCGATCAGAAGCGAGTACGTTTCCGAGTGGATGTTCTCCATCA 920394 Query 252149 ACATCTGGTAAGCATAGAATAGAC-GCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTG 252207 |||||| | | ||||| | || || ||| | || || | || ||||| Sbjct 920395 TGATCTGGAACCCGTAGAA-ACACTTGGCCTCAGGAACTTGCACCTCGGCAGAGAAGTTC 920453 Query 252208 TTTGCAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAA-GCCAAGAATGGTCTT 252266 | | | |||||| | || ||||| || | |||||||| ||||| | | || Sbjct 920454 TCGACCAAGTTCTCGTTGACAATGCCGTCCGAAGCAGCAAAGAAGGCCAACACT-CTCGA 920512 Query 252267 GATGAAGTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAG 252326 | |||| | ||| | ||||||||| ||| ||||||| | ||||| ||| Sbjct 920513 AACAAAGTATCTCTCGTTGTCGTTGAGTCTGTTGTTCCAGTCGTGCAGGTCCTTGGACAG 920572 Query 252327 AGGAACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACAT-TGCGAACACAT 252385 | | ||| || | |||||||| | || | | |||||||||||||| ||| || | | Sbjct 920573 ATCGATTTCCTCTGCGGTCCAGAACGAGGCCTCTGCCTTCTTGTACATCTGCCAA-ATCT 920631 Query 252386 CAGGGTACTTGATTGGGAA 252404 | |||||||||| ||||| Sbjct 920632 CGTGGTACTTGATAGGGAA 920650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836707815887