Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2 187 5e-42
seq1 176 8e-39
seq7 163 5e-35
seq4 145 1e-29
>seq2
Length=1516309
Score = 187 bits (206), Expect = 5e-42
Identities = 169/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
||||| || | |||||||||||||||||||| || || || || || || || || ||
Sbjct 177355 ACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAAAGGGTTCTGCCGTCCTCG 177414
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||||| |||||||| || | |||||| ||||| || || || ||||| ||||||||
Sbjct 177415 AGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGGATTCCTTCTTTGTCTTGG 177474
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||||||| ||||||||||| | || || || |||||||||||||| |||
Sbjct 177475 ATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACCTCCAAGGTGATGGTCTTT 177534
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| || | |||||||||||| ||||||||| ||
Sbjct 177535 CCGGTCAAGGTCTTGACGAAAATCTGCATTTTG 177567
>seq1
Length=1541475
Score = 176 bits (194), Expect = 8e-39
Identities = 165/210 (79%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| | || |||||||| || ||||| |||||||| || || || || ||||||
Sbjct 445994 ACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCT 446053
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||| || || || ||||||||||| ||||| || || || |||||||| ||||||
Sbjct 446054 AGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGA 446113
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||||| ||||| ||||| | |||||||| || || ||||| |||||
Sbjct 446114 ATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTACCTCTAAAGTGATAGTTTTG 446173
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || | ||||| ||||| |||||||||
Sbjct 446174 CCGGTCAAAGTCTTAACGAAAATCTGCATT 446203
Score = 163 bits (180), Expect = 5e-35
Identities = 164/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||| ||| | || ||||| ||||| ||||| |||||||| || || || || ||
Sbjct 445762 CAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGACAGAGTTCTACCGTC 445821
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| |||||| || || || ||||||||||| ||||| || || || |||||||| ||
Sbjct 445822 TTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATC 445881
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|||||| || | |||||| ||||| ||||| | || || || || | |||||||||
Sbjct 445882 TTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGT 445941
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || | ||| || ||||| || |||||
Sbjct 445942 CTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445974
Score = 159 bits (176), Expect = 6e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| || || || || || || || ||||| |||||||| || || || || ||
Sbjct 445078 CAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTC 445137
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| |||||| || || || ||||||||||| ||||| || || || |||||||| ||
Sbjct 445138 TTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTATC 445197
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||| || | ||||||| ||||| ||||| | || || || || | |||||||||
Sbjct 445198 CTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGT 445257
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || | ||| || ||||| || |||||
Sbjct 445258 CTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 445290
>seq7
Length=988507
Score = 163 bits (180), Expect = 5e-35
Identities = 162/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| | |||||||| || |||||||| || || || || || || || || ||
Sbjct 50095 ACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCG 50154
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||| || ||||| || |||||||| ||||| ||||| || || |||||||| ||
Sbjct 50155 AGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATTCCCTCCTTGTCCTGG 50214
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||||||| ||||||||||| | || || || || | |||||| || ||
Sbjct 50215 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTA 50274
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || |||||||||||||| || ||||||
Sbjct 50275 CCGGTCAGGGTCTTGACGAAGATTTGCATT 50304
>seq4
Length=1302532
Score = 145 bits (160), Expect = 1e-29
Identities = 299/442 (68%), Gaps = 12/442 (3%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
||||||||||||||||||||| || || || | |||||||||||||| |||||| |
Sbjct 919769 CATGACGCCCGCCTTCTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGC 919828
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
|| || ||| |||||||||||| || ||||| |||| | ||||| | | ||
Sbjct 919829 AAGAGAGATGTTCTCCATGAAGTCGAACGGGTTTGTGGCGTTGTAGTGCTTCTTGCAGCC 919888
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
|| | | | | |||||||| || ||||| | |||||||| |||||||| ||||
Sbjct 919889 CAGAGATAAAAGCAGCCGGTCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTT 919948
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGT---CCTTTTCGTTGGCGAC 10171
||| || | || | | || | ||||||| |||||| ||||||| | ||||
Sbjct 919949 CATACCCAGCAGGTTGACAGGCAGGGCGTCG---GTGAAGTATCTCTTTTCGATCTCGAC 920005
Query 10172 CGCTTCCTCGACGATGCTCTTTACCAC---GTCAAGGGACAGCTTGTTCTCGAGCTTCGA 10228
| ||||| |||| |||| | ||| ||| | | |||| | ||| | |||
Sbjct 920006 GG---CCTCGGTGATGATCTTGAGCACGATGTCGCTGTTTGGGGTGTTGTTGAGGTGCGA 920062
Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288
| || || |||| | || || |||||||| | || ||| |||||||| ||
Sbjct 920063 GAAGAGCAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGA 920122
Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348
|| |||||| ||||| || || | || |||||||| || | | ||||| ||
Sbjct 920123 GAAGGTCAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCC 920182
Query 10349 GGAGAACAGAAGACCCTCCACG 10370
||||| | || ||||||||||
Sbjct 920183 AGAGAAGAAAATACCCTCCACG 920204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622319358040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |