Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2 187 5e-42 seq1 176 8e-39 seq7 163 5e-35 seq4 145 1e-29 >seq2 Length=1516309 Score = 187 bits (206), Expect = 5e-42 Identities = 169/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || | |||||||||||||||||||| || || || || || || || || || Sbjct 177355 ACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAAAGGGTTCTGCCGTCCTCG 177414 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||| |||||||| || | |||||| ||||| || || || ||||| |||||||| Sbjct 177415 AGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGGATTCCTTCTTTGTCTTGG 177474 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||||||| ||||||||||| | || || || |||||||||||||| ||| Sbjct 177475 ATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACCTCCAAGGTGATGGTCTTT 177534 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || | |||||||||||| ||||||||| || Sbjct 177535 CCGGTCAAGGTCTTGACGAAAATCTGCATTTTG 177567 >seq1 Length=1541475 Score = 176 bits (194), Expect = 8e-39 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | || |||||||| || ||||| |||||||| || || || || |||||| Sbjct 445994 ACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCT 446053 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || || || ||||||||||| ||||| || || || |||||||| |||||| Sbjct 446054 AGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGA 446113 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||||| ||||| ||||| | |||||||| || || ||||| ||||| Sbjct 446114 ATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTACCTCTAAAGTGATAGTTTTG 446173 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | ||||| ||||| ||||||||| Sbjct 446174 CCGGTCAAAGTCTTAACGAAAATCTGCATT 446203 Score = 163 bits (180), Expect = 5e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||| ||| | || ||||| ||||| ||||| |||||||| || || || || || Sbjct 445762 CAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGACAGAGTTCTACCGTC 445821 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| |||||| || || || ||||||||||| ||||| || || || |||||||| || Sbjct 445822 TTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATC 445881 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||| || | |||||| ||||| ||||| | || || || || | ||||||||| Sbjct 445882 TTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGT 445941 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || | ||| || ||||| || ||||| Sbjct 445942 CTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445974 Score = 159 bits (176), Expect = 6e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| || || || || || || || ||||| |||||||| || || || || || Sbjct 445078 CAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTC 445137 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| |||||| || || || ||||||||||| ||||| || || || |||||||| || Sbjct 445138 TTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTATC 445197 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||| || | ||||||| ||||| ||||| | || || || || | ||||||||| Sbjct 445198 CTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGT 445257 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || | ||| || ||||| || ||||| Sbjct 445258 CTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 445290 >seq7 Length=988507 Score = 163 bits (180), Expect = 5e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| | |||||||| || |||||||| || || || || || || || || || Sbjct 50095 ACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCG 50154 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || ||||| || |||||||| ||||| ||||| || || |||||||| || Sbjct 50155 AGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGGGATTCCCTCCTTGTCCTGG 50214 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||||||| ||||||||||| | || || || || | |||||| || || Sbjct 50215 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTA 50274 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || |||||||||||||| || |||||| Sbjct 50275 CCGGTCAGGGTCTTGACGAAGATTTGCATT 50304 >seq4 Length=1302532 Score = 145 bits (160), Expect = 1e-29 Identities = 299/442 (68%), Gaps = 12/442 (3%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||||||||||||||||||||| || || || | |||||||||||||| |||||| | Sbjct 919769 CATGACGCCCGCCTTCTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGC 919828 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || || ||| |||||||||||| || ||||| |||| | ||||| | | || Sbjct 919829 AAGAGAGATGTTCTCCATGAAGTCGAACGGGTTTGTGGCGTTGTAGTGCTTCTTGCAGCC 919888 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 || | | | | |||||||| || ||||| | |||||||| |||||||| |||| Sbjct 919889 CAGAGATAAAAGCAGCCGGTCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTT 919948 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGT---CCTTTTCGTTGGCGAC 10171 ||| || | || | | || | ||||||| |||||| ||||||| | |||| Sbjct 919949 CATACCCAGCAGGTTGACAGGCAGGGCGTCG---GTGAAGTATCTCTTTTCGATCTCGAC 920005 Query 10172 CGCTTCCTCGACGATGCTCTTTACCAC---GTCAAGGGACAGCTTGTTCTCGAGCTTCGA 10228 | ||||| |||| |||| | ||| ||| | | |||| | ||| | ||| Sbjct 920006 GG---CCTCGGTGATGATCTTGAGCACGATGTCGCTGTTTGGGGTGTTGTTGAGGTGCGA 920062 Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288 | || || |||| | || || |||||||| | || ||| |||||||| || Sbjct 920063 GAAGAGCAGACAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGA 920122 Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348 || |||||| ||||| || || | || |||||||| || | | ||||| || Sbjct 920123 GAAGGTCAGACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCC 920182 Query 10349 GGAGAACAGAAGACCCTCCACG 10370 ||||| | || |||||||||| Sbjct 920183 AGAGAAGAAAATACCCTCCACG 920204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622319358040