Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 9e-22
seq2 104 2e-17
>seq1
Length=1541475
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | | ||||| || || || | ||||| ||||| |||||||||||||||
Sbjct 445973 ATACCACCTCTCAATCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCG 446032
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| | | ||||| || || |||||||| | ||||| | || ||||| |||
Sbjct 446033 GACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGA 446092
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| || || |||||| ||| | | || | ||||| | |||||
Sbjct 446093 GGGATTCCTTCCTTATCTTGAATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCT 446152
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | ||||||||||||| ||| || || |||||||||||
Sbjct 446153 ACCTCTAAAGTGATAGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCAT 446202
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224
||||||||||| ||||| | |||||||| || ||||||||||||||| || ||| | |
Sbjct 445073 AGTCTCAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGACAGAGTTCTA 445132
Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284
||||| || || |||||||| | ||||| | || ||||| || || || |||||
Sbjct 445133 CCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGGATTCCTTCC 445192
Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344
|| || ||| || || | | || | ||||| | ||| || || || | |||
Sbjct 445193 TTATCCTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTG 445252
Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| || || || |||| ||||| || ||||| |||||
Sbjct 445253 ATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 445290
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | | ||||||||| | || | || || || ||||||||||||||||||
Sbjct 445745 ATACCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCG 445804
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| | | ||||| || || |||||||| | ||||| | || ||||| |||
Sbjct 445805 GACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGA 445864
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| || || ||| || || | | || | ||||| | ||| ||
Sbjct 445865 GGGATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCA 445924
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || ||||||| ||||| || ||||| |||||
Sbjct 445925 ACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445974
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | | ||||| || | || | ||||| ||||| ||||||||||||||
Sbjct 445517 ATACCACCTCTCAATCTCAGGACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCA 445576
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| | ||||| ||||| ||||||||| | || | | |||||| || ||
Sbjct 445577 GACAGAGTTCTGCCGTCTTCGAGTTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGC 445636
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || ||||| || ||| || ||| | | || | ||||| | ||| ||
Sbjct 445637 GGGATACCCTCTTTATCCTGAATTTTAGATTTCACATTATCGATAGTGTCAGAGGACTCA 445696
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || ||||||| ||||| || ||||| |||||
Sbjct 445697 ACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445746
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | | ||||||||| | ||| | || || || ||||||||||| || |||
Sbjct 445289 ATACCACCTCTCAATCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCG 445348
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || | | ||||| ||||| ||||||||| | || || | || ||||| ||
Sbjct 445349 GATAACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGG 445408
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| || || ||| || || | | || | ||||| | ||| ||
Sbjct 445409 GGGATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCA 445468
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || ||||||| ||||| || ||||| |||||
Sbjct 445469 ACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445518
>seq2
Length=1516309
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | ||||||| ||| ||||| | || || |||||||| |||||||| ||
Sbjct 177334 ATACCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCT 177393
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || | || || ||||| ||||| ||| |||| | | || ||||| |||
Sbjct 177394 GAAAGGGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGA 177453
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||||||||| ||||| || | | || | |||||||| || |||
Sbjct 177454 GGGATTCCTTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCG 177513
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | || || ||||||| || || || |||||||||||
Sbjct 177514 ACCTCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 177563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134364157284
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |