Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq4 334 1e-86
seq2 279 1e-69
>seq4
Length=1302532
Score = 334 bits (370), Expect = 1e-86
Identities = 608/877 (69%), Gaps = 32/877 (4%)
Strand=Plus/Minus
Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344
||| || |||| || || ||| |||||||||||||| || ||| |||||||||
Sbjct 920644 ATCAAGTACCACGAGATTTGGCAGATGTACAAGAAGGCAGAGGCCTCGTTCTGGACCGCA 920585
Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCT----GAGAACGA 42400
||||| || || ||| |||||||| | || |||| | || | || || |||||
Sbjct 920584 GAGGAAATCGATCTGTCCAAGGACCTGCACGACTGGAACA-ACAGACTCAACGACAACGA 920526
Query 42401 AAAGT--TTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAAT 42458
| | ||| || | | | |||||||||| || || || |||||||| |||||
Sbjct 920525 GAGATACTTTGTTTCGAGAGTGT--TGGCCTTCTTTGCTGCTTCGGACGGCATTGTCAAC 920468
Query 42459 GAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCA-GTACTTTGAGGCGCGCTGCTTCTA 42517
|||||| ||| | | ||| |||||||| || | | ||||| || |||||
Sbjct 920467 GAGAACTTGGTCGAGAACTTCTCTGCCGAGGTGCAAGTTCCT-GAGGCCAAGTGTTTCTA 920409
Query 42518 CGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACAC 42577
||| |||||||| || |||||| | ||||| || |||| | ||| || ||||
Sbjct 920408 CGGGTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTCGCTTCTGATCGACAC 920349
Query 42578 GTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTG 42637
||| || ||| || || | | || ||||| ||||| ||||| || || ||
Sbjct 920348 CTACGTCAAGGACCCTAAGGAAGCTGAGTTCCTTTTCAACGCCATTGAGACCATCCCATG 920289
Query 42638 CATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGT 42693
|||||| ||||||| || ||||| | | |||||| | ||| || || ||
Sbjct 920288 TATCAAGGAGAAGGCCGAATGGGCCATGAGATGGATCAACGACGAG----GAAGCCCTGT 920233
Query 42694 TCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCG 42753
| | |||||| || || || ||| | ||||| ||||| || |||||||| ||| | || |
Sbjct 920232 TTGCCGAGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGCTCGTTTG 920173
Query 42754 CCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAA 42812
|||| ||||||||||||||| ||| ||| | |||||| || || ||||||||||||||
Sbjct 920172 CCTCGATCTTCTGGCTCAAGAAGAGAGGACT-GATGCCTGGTCTGACCTTCTCGAACGAG 920114
Query 42813 CTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCAC 42872
| ||| |||| |||||||| ||||||| ||||||||||| || || |||||| |||
Sbjct 920113 TTGATCTGCAGAGACGAGGGTCTGCATACCGACTTTGCCTGTCTGCTCTTCTCG---CAC 920057
Query 42873 CTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGC----CATCATCACGGAGGCCGTGGA 42928
|||| |||| | | | || |||| || || |||||||| |||||||| ||
Sbjct 920056 CTCA---ACAA-CACCCCAAACAGCGACATCGTGCTCAAGATCATCACCGAGGCCGTCGA 920001
Query 42929 GATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGA 42988
|||||| ||| | | |||| | | ||||| || |||| | || |||||| | |
Sbjct 920000 GATCGAAAAGAGATACTTCACCGACGCCCTGCCTGTCAACCTGCTGGGTATGAACTGCAA 919941
Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAG 43048
||| |||||| ||||| | ||| || || |||| || || | |||| ||
Sbjct 919940 CCTGATGTGCCAGTACGTGGAGTTTGTTGCTGACCGGCTGCTTTTATCTCTGGGCTGCAA 919881
Query 43049 CCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAA 43108
| ||||||| | | ||| |||||||| |||||||||||||| | | |||||
Sbjct 919880 GAAGCACTACAACGCCACAAACCCGTTCGACTTCATGGAGAACATCTCTCTTGCAGGCAA 919821
Query 43109 GACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
||||||||| ||||||||| | ||| |||| ||||||
Sbjct 919820 GACCAACTTCTTCGAGAAGAGAGTCTCCGATTACCAG 919784
>seq2
Length=1516309
Score = 279 bits (308), Expect = 1e-69
Identities = 1107/1716 (65%), Gaps = 57/1716 (3%)
Strand=Plus/Plus
Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796
||| |||| |||| | || | || |||| ||| || |||||||||||||||||||||
Sbjct 916092 ACGGTGAATTGGATCGCAGCAGCAGCAGCCTGGGTTCTGAGGTAGTACATGCCGGTCTTG 916151
Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856
||||| | |||| | | || |||||| | ||||| ||| ||| | ||||
Sbjct 916152 AGTCCTTTCTTCCAGCCATAGAAGTGCATCGACGTCAACTTGCCCATGGT------TGGG 916205
Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTC 243915
| || | || || || | ||||| |||||||| | | | |||| | ||
Sbjct 916206 TT---CTTG---AGGTGGATATTCATCGACTGCGACTGGTCGATGTACG-CGCCTCTGTC 916258
Query 243916 TGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975
|| |||||| ||| | | ||||| | ||||| | | || ||| | | |||
Sbjct 916259 GGCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCCCAGACGGTGCGGTACAGGTCCTT 916318
Query 243976 GAGGTGCTCGGGGAACCCTTCG-ATGTTCTGCACCGAGCCCTTGTG---GACGATGAGCT 244031
| | || | || || || | | |||||| | |||||| |||| || ||||| |
Sbjct 916319 CAACTCCT-GTGGCACATTTGGCAAGTTCTGGATCGAGCCGTTGTCCTTGATGATGAAAT 916377
Query 244032 GGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGT 244091
| ||| |||||||||| || | | | || || | || || | ||
Sbjct 916378 TCTT---CATCGAGTCGTTCCACAATCCAAGGTTAACAAGGTCCCTCAGCAAGTACGGGT 916434
Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151
| || | ||| ||||| || | || || | | ||||| |||| | || ||||
Sbjct 916435 TGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAGATGTTGGAGGTGTAAGGCT 916494
Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211
||| | ||| | | |||| ||||||| || ||| || ||||| || | |||||
Sbjct 916495 CGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATAGGAGCCACCA 916554
Query 244212 GCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACA 244271
|| || || | || | | ||||||| ||| ||||| || |||||||||||
Sbjct 916555 AGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCCCAGTCCCACA 916614
Query 244272 TGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT-GCTG 244330
|| ||| | || | | |||||| | ||| ||||||| | |||| | |
Sbjct 916615 -----GATCGGT--TGGCTTCTT--GCCCCAAAGGTCGAACTGCAAAATACCCTGCGACG 916665
Query 244331 ACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA-CAGCTCTC 244389
||| | | ||||| ||||| ||| || || | |||||||| ||| |
Sbjct 916666 CCGGCGAT-CCCTCAAAGGTCTCGTATTTGCCATCCCTAACGGCCAGCTCGGCAGAGGCC 916724
Query 244390 GTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT-TGC 244448
|| | || ||| ||||||||||||||| ||| |||||| || | ||||| ||
Sbjct 916725 -TCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCTCTGGCCTCTGG 916783
Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508
| || || || | | || | |||||| ||||||||||| ||||| || || | |
Sbjct 916784 TG-AGTCAAAAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGGACACCCACGG 916842
Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568
| || || |||| ||| ||||||| | || || || || || ||| |||| | ||
Sbjct 916843 CAATCGGCCTGTTGCGCATGTTGGATGTTCTTGCCTCTGGAACAGGATAATAGTTTCTGT 916902
Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628
|||| | |||||||||||| |||| | | || | | |||| | ||||
Sbjct 916903 CGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTTCGAAGT 916962
Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCA-CAAACTCGTTGAGGGCGACGCTG 244687
|||| | || || ||| || || |||| | || | |||||||
Sbjct 916963 TGTACCAGCTGGTATTGTCGTCG-----GA--CTCAACGAAGGCTGGAAGGGCGATCGAC 917015
Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCG-AGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746
|||| || || |||||||||||||| | || || ||||| |||||| ||| ||| |
Sbjct 917016 GCCAAATTACACACGGCCACCTCCTCTGGAGATGA-GTACTCGACAATTTCGCAGCACAA 917074
Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806
||| |||||||| | || |||| || || |||| ||||| |||||||||||||||
Sbjct 917075 ATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTCCTT 917134
Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866
||| |||||||| ||| || || || |||||| | | | | || ||| || |
Sbjct 917135 GTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAGCTT 917194
Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926
| |||||||||||| ||| | ||| || ||||| | |||||| || |||
Sbjct 917195 CTGTGCCTTGACCGTCTGGCGTCCACGGCCTTCCTTTTCGTATCTGGTGTAGAGCTCCTT 917254
Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCAC---GACGCCGGGCACATGAGACT 244983
||||||| ||| | || ||| || || || | || | || | ||| | |
Sbjct 917255 GAACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACA---GCGT 917311
Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043
|||||| || | || ||| |||| |||||| ||||| || ||||| || || ||||
Sbjct 917312 CCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAA 917371
Query 245044 GAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCA 245101
||||| |||| ||||| ||| ||| ||| |||||||| | || | |||||||
Sbjct 917372 CAGGTCTCTGG--CTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCA 917429
Query 245102 AAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCT 245161
|| | || |||||| ||||| | ||| | ||| | ||||| |||||||||||||||
Sbjct 917430 AAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCT 917489
Query 245162 CCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221
|||||||| || || || |||||| | | || | || | ||||||||
Sbjct 917490 CCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTG 917549
Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG 245281
|| ||||||||| || |||||| | || || || | |||| ||| ||
Sbjct 917550 GACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGA 917609
Query 245282 CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCC 245341
|| | || || || ||||||||| || || ||| |||||| |||||| |||||
Sbjct 917610 CCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCG 917669
Query 245342 TCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTG 245401
|| ||| ||| ||||||| | || || ||||| |||| ||| || | || |
Sbjct 917670 TCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTA 917729
Query 245402 CACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437
| | || |||||||| || |||||||| |||
Sbjct 917730 CCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAG 917765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944339117370320
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