Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4 334 1e-86 seq2 279 1e-69 >seq4 Length=1302532 Score = 334 bits (370), Expect = 1e-86 Identities = 608/877 (69%), Gaps = 32/877 (4%) Strand=Plus/Minus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 ||| || |||| || || ||| |||||||||||||| || ||| ||||||||| Sbjct 920644 ATCAAGTACCACGAGATTTGGCAGATGTACAAGAAGGCAGAGGCCTCGTTCTGGACCGCA 920585 Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCT----GAGAACGA 42400 ||||| || || ||| |||||||| | || |||| | || | || || ||||| Sbjct 920584 GAGGAAATCGATCTGTCCAAGGACCTGCACGACTGGAACA-ACAGACTCAACGACAACGA 920526 Query 42401 AAAGT--TTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAAT 42458 | | ||| || | | | |||||||||| || || || |||||||| ||||| Sbjct 920525 GAGATACTTTGTTTCGAGAGTGT--TGGCCTTCTTTGCTGCTTCGGACGGCATTGTCAAC 920468 Query 42459 GAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCA-GTACTTTGAGGCGCGCTGCTTCTA 42517 |||||| ||| | | ||| |||||||| || | | ||||| || ||||| Sbjct 920467 GAGAACTTGGTCGAGAACTTCTCTGCCGAGGTGCAAGTTCCT-GAGGCCAAGTGTTTCTA 920409 Query 42518 CGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACAC 42577 ||| |||||||| || |||||| | ||||| || |||| | ||| || |||| Sbjct 920408 CGGGTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTCGCTTCTGATCGACAC 920349 Query 42578 GTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTG 42637 ||| || ||| || || | | || ||||| ||||| ||||| || || || Sbjct 920348 CTACGTCAAGGACCCTAAGGAAGCTGAGTTCCTTTTCAACGCCATTGAGACCATCCCATG 920289 Query 42638 CATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGT 42693 |||||| ||||||| || ||||| | | |||||| | ||| || || || Sbjct 920288 TATCAAGGAGAAGGCCGAATGGGCCATGAGATGGATCAACGACGAG----GAAGCCCTGT 920233 Query 42694 TCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCG 42753 | | |||||| || || || ||| | ||||| ||||| || |||||||| ||| | || | Sbjct 920232 TTGCCGAGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGCTCGTTTG 920173 Query 42754 CCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAA 42812 |||| ||||||||||||||| ||| ||| | |||||| || || |||||||||||||| Sbjct 920172 CCTCGATCTTCTGGCTCAAGAAGAGAGGACT-GATGCCTGGTCTGACCTTCTCGAACGAG 920114 Query 42813 CTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCAC 42872 | ||| |||| |||||||| ||||||| ||||||||||| || || |||||| ||| Sbjct 920113 TTGATCTGCAGAGACGAGGGTCTGCATACCGACTTTGCCTGTCTGCTCTTCTCG---CAC 920057 Query 42873 CTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGC----CATCATCACGGAGGCCGTGGA 42928 |||| |||| | | | || |||| || || |||||||| |||||||| || Sbjct 920056 CTCA---ACAA-CACCCCAAACAGCGACATCGTGCTCAAGATCATCACCGAGGCCGTCGA 920001 Query 42929 GATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGA 42988 |||||| ||| | | |||| | | ||||| || |||| | || |||||| | | Sbjct 920000 GATCGAAAAGAGATACTTCACCGACGCCCTGCCTGTCAACCTGCTGGGTATGAACTGCAA 919941 Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAG 43048 ||| |||||| ||||| | ||| || || |||| || || | |||| || Sbjct 919940 CCTGATGTGCCAGTACGTGGAGTTTGTTGCTGACCGGCTGCTTTTATCTCTGGGCTGCAA 919881 Query 43049 CCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAA 43108 | ||||||| | | ||| |||||||| |||||||||||||| | | ||||| Sbjct 919880 GAAGCACTACAACGCCACAAACCCGTTCGACTTCATGGAGAACATCTCTCTTGCAGGCAA 919821 Query 43109 GACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||| ||||||||| | ||| |||| |||||| Sbjct 919820 GACCAACTTCTTCGAGAAGAGAGTCTCCGATTACCAG 919784 >seq2 Length=1516309 Score = 279 bits (308), Expect = 1e-69 Identities = 1107/1716 (65%), Gaps = 57/1716 (3%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| |||| |||| | || | || |||| ||| || ||||||||||||||||||||| Sbjct 916092 ACGGTGAATTGGATCGCAGCAGCAGCAGCCTGGGTTCTGAGGTAGTACATGCCGGTCTTG 916151 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 ||||| | |||| | | || |||||| | ||||| ||| ||| | |||| Sbjct 916152 AGTCCTTTCTTCCAGCCATAGAAGTGCATCGACGTCAACTTGCCCATGGT------TGGG 916205 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTC 243915 | || | || || || | ||||| |||||||| | | | |||| | || Sbjct 916206 TT---CTTG---AGGTGGATATTCATCGACTGCGACTGGTCGATGTACG-CGCCTCTGTC 916258 Query 243916 TGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 || |||||| ||| | | ||||| | ||||| | | || ||| | | ||| Sbjct 916259 GGCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCCCAGACGGTGCGGTACAGGTCCTT 916318 Query 243976 GAGGTGCTCGGGGAACCCTTCG-ATGTTCTGCACCGAGCCCTTGTG---GACGATGAGCT 244031 | | || | || || || | | |||||| | |||||| |||| || ||||| | Sbjct 916319 CAACTCCT-GTGGCACATTTGGCAAGTTCTGGATCGAGCCGTTGTCCTTGATGATGAAAT 916377 Query 244032 GGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGT 244091 | ||| |||||||||| || | | | || || | || || | || Sbjct 916378 TCTT---CATCGAGTCGTTCCACAATCCAAGGTTAACAAGGTCCCTCAGCAAGTACGGGT 916434 Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151 | || | ||| ||||| || | || || | | ||||| |||| | || |||| Sbjct 916435 TGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAGATGTTGGAGGTGTAAGGCT 916494 Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211 ||| | ||| | | |||| ||||||| || ||| || ||||| || | ||||| Sbjct 916495 CGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATAGGAGCCACCA 916554 Query 244212 GCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACA 244271 || || || | || | | ||||||| ||| ||||| || ||||||||||| Sbjct 916555 AGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCCCAGTCCCACA 916614 Query 244272 TGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT-GCTG 244330 || ||| | || | | |||||| | ||| ||||||| | |||| | | Sbjct 916615 -----GATCGGT--TGGCTTCTT--GCCCCAAAGGTCGAACTGCAAAATACCCTGCGACG 916665 Query 244331 ACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA-CAGCTCTC 244389 ||| | | ||||| ||||| ||| || || | |||||||| ||| | Sbjct 916666 CCGGCGAT-CCCTCAAAGGTCTCGTATTTGCCATCCCTAACGGCCAGCTCGGCAGAGGCC 916724 Query 244390 GTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT-TGC 244448 || | || ||| ||||||||||||||| ||| |||||| || | ||||| || Sbjct 916725 -TCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCTCTGGCCTCTGG 916783 Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508 | || || || | | || | |||||| ||||||||||| ||||| || || | | Sbjct 916784 TG-AGTCAAAAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGGACACCCACGG 916842 Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568 | || || |||| ||| ||||||| | || || || || || ||| |||| | || Sbjct 916843 CAATCGGCCTGTTGCGCATGTTGGATGTTCTTGCCTCTGGAACAGGATAATAGTTTCTGT 916902 Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628 |||| | |||||||||||| |||| | | || | | |||| | |||| Sbjct 916903 CGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTTCGAAGT 916962 Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCA-CAAACTCGTTGAGGGCGACGCTG 244687 |||| | || || ||| || || |||| | || | ||||||| Sbjct 916963 TGTACCAGCTGGTATTGTCGTCG-----GA--CTCAACGAAGGCTGGAAGGGCGATCGAC 917015 Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCG-AGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 |||| || || |||||||||||||| | || || ||||| |||||| ||| ||| | Sbjct 917016 GCCAAATTACACACGGCCACCTCCTCTGGAGATGA-GTACTCGACAATTTCGCAGCACAA 917074 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 ||| |||||||| | || |||| || || |||| ||||| ||||||||||||||| Sbjct 917075 ATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTCCTT 917134 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866 ||| |||||||| ||| || || || |||||| | | | | || ||| || | Sbjct 917135 GTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAGCTT 917194 Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926 | |||||||||||| ||| | ||| || ||||| | |||||| || ||| Sbjct 917195 CTGTGCCTTGACCGTCTGGCGTCCACGGCCTTCCTTTTCGTATCTGGTGTAGAGCTCCTT 917254 Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCAC---GACGCCGGGCACATGAGACT 244983 ||||||| ||| | || ||| || || || | || | || | ||| | | Sbjct 917255 GAACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACA---GCGT 917311 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 |||||| || | || ||| |||| |||||| ||||| || ||||| || || |||| Sbjct 917312 CCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAA 917371 Query 245044 GAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCA 245101 ||||| |||| ||||| ||| ||| ||| |||||||| | || | ||||||| Sbjct 917372 CAGGTCTCTGG--CTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCA 917429 Query 245102 AAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCT 245161 || | || |||||| ||||| | ||| | ||| | ||||| ||||||||||||||| Sbjct 917430 AAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCT 917489 Query 245162 CCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221 |||||||| || || || |||||| | | || | || | |||||||| Sbjct 917490 CCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTG 917549 Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG 245281 || ||||||||| || |||||| | || || || | |||| ||| || Sbjct 917550 GACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGA 917609 Query 245282 CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCC 245341 || | || || || ||||||||| || || ||| |||||| |||||| ||||| Sbjct 917610 CCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCG 917669 Query 245342 TCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTG 245401 || ||| ||| ||||||| | || || ||||| |||| ||| || | || | Sbjct 917670 TCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTA 917729 Query 245402 CACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 | | || |||||||| || |||||||| ||| Sbjct 917730 CCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAG 917765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339117370320