Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1 113 1e-19 seq7 95.1 3e-14 >seq1 Length=1541475 Score = 113 bits (124), Expect = 1e-19 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 334130 GGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCC 334189 ||| ||||| | ||||| || || || ||||| | | | || || ||||| || Sbjct 485000 GGAACCGTCAATGTCGTGCTCAACATAGACAGTTCTACATTCTTCTTGAGTTGGGAAACC 484941 Query 334190 TTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCC 334249 ||| | |||||||| ||||||| | ||||||||| || ||||| || |||||||| || Sbjct 484940 TTCGACTTGACCGTTGGCAATAGCCCTCATCAGAGTAGACTTACCAGCACCGTTTGGACC 484881 Query 334250 ACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTT 334309 || |||||||| | | | | ||||| | | | || ||||||| | || || Sbjct 484880 GCAAAGACCGTATCTTCTAGCTCTCTTCAATCTAAGTTGAGTCTTGTTCAATAAGATCTT 484821 Query 334310 TCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 ||||||| |||||||| || ||||| | ||| ||||||||||| Sbjct 484820 GGCACCATAAGCCAGAGAGAACTCACAGTTACAGAGATCCTCACC 484776 >seq7 Length=988507 Score = 95.1 bits (104), Expect = 3e-14 Identities = 182/268 (68%), Gaps = 3/268 (1%) Strand=Plus/Plus Query 333726 TTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGG 333785 || || |||||||||| || |||||||| | | ||| || ||| ||| || || Sbjct 786322 TTGACAAACTCGGACAAGTTGCCCTTGTAGTACACCAGTTTCTTGTT---TTCATAGTGT 786378 Query 333786 ATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAA 333845 || | ||||| |||| ||| | || || || ||||| || ||||||| ||| Sbjct 786379 ATGACGTCAGTGCAGACAGTGTCCAAAAATCCAGAATCGTGCGAAACAATCAGAGACGTG 786438 Query 333846 ACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGG 333905 | || | | | | ||||| || ||||| |||| || || ||| |||||| Sbjct 786439 ATATCTGTGTGCTGAACTAGGTAATCTTCAAGCCATTTCACATTGGAAACATCCAGATGG 786498 Query 333906 TTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCG 333965 ||||| |||||||| ||||| || | | || |||| ||||| || | ||||| | Sbjct 786499 TTGGTTGGCTCGTCGAGAAGCAGAACGTCAGCCTTCATAAGCATGGCTCTCGCAAGTTCA 786558 Query 333966 AGTTTCATTTTCCACCCTCCTGAAAGAG 333993 || ||||| ||||| |||||||| |||| Sbjct 786559 AGCTTCATCTTCCATCCTCCTGAGAGAG 786586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879901085450