Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2 338 7e-88 seq4 116 4e-21 >seq2 Length=1516309 Score = 338 bits (374), Expect = 7e-88 Identities = 1185/1824 (65%), Gaps = 47/1824 (3%) Strand=Plus/Plus Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647 |||| | || |||||||||||| || |||||||| || | ||||||| |||| | ||| Sbjct 916119 GCCTGGGTTCTGAGGTAGTACATGCCGGTCTTGAGTCCTTTCTTCCAGCCATAGAAGTGC 916178 Query 113648 ATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 113707 ||||| | ||||||| | ||||| | | | | || ||||| || || || Sbjct 916179 ATCGACGTCAACTTGCCCATGGTTGGGTTCTTGAGGTGGATATTCATCGACTGCGACTGG 916238 Query 113708 TCGATGAA-GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 113766 |||||| | ||| || | || |||||||| || || | ||| | || ||||| Sbjct 916239 TCGATGTACGCG-CCTCTGTCGGCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCCCA 916297 Query 113767 CACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCC 113826 || || | ||| |||| ||| | || | ||| | || | || ||||| ||||| Sbjct 916298 GACGGTGCGGTACAGGTCCTTCAACTCCTGTGGCACATTTGGCAAGTTCTGGATCGAGCC 916357 Query 113827 ACCCGCCTTGACCATGAGATCCTTCAT--ATCCTTTGACCAGAGACCAATCTTTTTGAGA 113884 |||||| |||| || |||||| | | || ||| | |||| || || Sbjct 916358 GTTGTCCTTGATGATGAAATTCTTCATCGAGTCGTT--CCACAATCCAAGGTTAACAAGG 916415 Query 113885 TCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAG 113944 ||| || | | | ||||| | |||||||| || || | ||| ||| Sbjct 916416 TCCCTCAGCAAGTACGGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAG 916475 Query 113945 ATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCT 114004 || |||| ||||| ||||| || ||||| || | ||||| || || | || || || Sbjct 916476 ATGTTGGAGGTGTAAGGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCG 916535 Query 114005 GTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTG 114064 || ||||| || |||| | || || | ||| || | | | || || ||||| Sbjct 916536 GTTGGCATAGGAGCCACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTG 916595 Query 114065 AGGGCGTCCCAGTCGTAGTTGAGCT-TTGTCTCCCCCTGCCACATA--TCAAACTGGAGG 114121 || | ||||||||| | || | ||| || | |||| || | || ||||| | Sbjct 916596 AGCGAGTCCCAGTCCCACA-GATCGGTTGGCTTCT--TGCCCCAAAGGTCGAACTGCAAA 916652 Query 114122 ATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCT--CCGCCA 114179 ||||| || || || |||||||||||||| ||||||||| ||| || ||| | |||| Sbjct 916653 ATACCCTGCGACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATC--CCTAACGGCCA 916710 Query 114180 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 114239 |||| ||||| | || |||| || || ||||| ||||| | |||| Sbjct 916711 GCTCGGCAGAGGCCTCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCT 916770 Query 114240 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 114299 | ||||||| || ||||| | |||| | || || || || || || || | Sbjct 916771 CTCTGGCCTCTGGTGAGTCAAAAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCT 916830 Query 114300 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGGA 114358 ||||||| | | |||| || | | | ||| || || ||| || ||| | | ||| Sbjct 916831 GGACACCCACGGCAATCGGCCTGTTGCGCATGTTGGATGTTCTTGCC-TCTGGAACAGGA 916889 Query 114359 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 114418 ||| | || || ||||| | | | || || || || ||||||||||| ||||| | || Sbjct 916890 TAATAGTTTCTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGC 916949 Query 114419 AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT--ACTTAGG----AAGGGCG 114472 ||||||||| | | | | || || | || | | | || ||| ||||||| Sbjct 916950 AGCTTTTCGAAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCG 917009 Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 || ||||||| ||||||||| | ||| || | | |||||| | |||||| Sbjct 917010 ATCGACGCCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAG 917069 Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 114592 |||||||| || ||| ||| | || | |||||| || || | ||| | ||| || || Sbjct 917070 CACAAATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCG 917129 Query 114593 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 114652 |||||||| |||||| ||||||| || || ||||| |||| || | ||| || | ||| Sbjct 917130 TCCTTGTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCAC 917189 Query 114653 A-CATCGGCGGCTGGCACAGT--GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 114709 | | || | | || | || || ||||| | || || |||| ||||| | |||||| Sbjct 917190 AGCTTCTGTGCCTTG-ACCGTCTGGCGTC--CACGGCCTTCCTTTTCGTATCTGGTGTAG 917246 Query 114710 AGGGCTTCAAACTCTTCACC---CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAG 114766 || | | ||||| || || |||| || || |||||||| |||| || || Sbjct 917247 AGCTCCTTGAACTCGTCGCCGTACACG---TCGGAAAGCCCTGGAGCCTCGGAAGGCGAG 917303 Query 114767 AAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGA 114826 || || | ||| | | | || ||| || | || |||||| |||||||| ||||| || Sbjct 917304 AACAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGC 917363 Query 114827 GCTGAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 114885 || | ||| || || | | | || || || | | || || || || | || | Sbjct 917364 GCAGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCA-TGGTTCTTCCGGATGTCGAT 917422 Query 114886 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC------CGCGATTGACCCCTT 114939 |||||| | ||||||| |||||| || || | ||||| |||| | || ||| Sbjct 917423 AAAGTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTT 917482 Query 114940 ACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAAT 114999 | | || |||||| || || || || ||| || || || | | ||||||||| Sbjct 917483 --GTTG-CCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAAT 917539 Query 115000 GATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATG 115059 ||| || | || ||| || || || || |||| ||| ||| | | || Sbjct 917540 GATGCCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTG 917599 Query 115060 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 115119 ||||||| |||||| || || || ||| ||||| | || || | |||| || | Sbjct 917600 AATGTGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTC 917659 Query 115120 GTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGG 115179 ||||| |||||||| ||||| |||| | || | | ||| ||| ||||| || || Sbjct 917660 ATAGATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGG 917719 Query 115180 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 115239 || ||||| || || || || ||||| | ||||||| |||| | ||| ||||| Sbjct 917720 ATGAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACAT 917779 Query 115240 CTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299 | | ||| ||||| | |||| ||||||||| || || || ||||| || | || || Sbjct 917780 CAGGTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACG 917839 Query 115300 CATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTT 115359 ||| | ||||| |||||| | || | | ||||| | | || ||| || | Sbjct 917840 CATGACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCG 917899 Query 115360 CTCCAAGGTCTTGAGACCAAAATA 115383 ||||| ||||||| |||||||| Sbjct 917900 CTCCAGCGTCTTGAAGCCAAAATA 917923 >seq4 Length=1302532 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || || ||||||||||| | | |||| | || ||||||||| ||| || Sbjct 920075 GGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACC 920134 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| || || | |||||| | |||||| |||| ||| || || |||||||| || Sbjct 920135 AGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAAT 920194 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAA 126224 |||||||| || ||||||| ||| | ||| ||||| || || | | || || | Sbjct 920195 ACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAA-CAGGGCTTCCTCGTCGTTGA 920253 Query 126225 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCT 126272 ||| |||| ||||| | ||||| | || |||||| |||| ||||| Sbjct 920254 TCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCT 920301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353547731560