Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 253 2e-62 >seq2 Length=1516309 Score = 253 bits (280), Expect = 2e-62 Identities = 1076/1674 (64%), Gaps = 48/1674 (3%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | || |||| |||||| || |||||| ||| || ||| | ||||| ||||| | Sbjct 917929 TACAACTATTTTGGCTTCAAGACGCTGGAGCGGTCATATCTCTTGAAGATTGATGGAAAA 917870 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || ||||| |||| || || || | ||||| || ||||| || || || ||| | ||| Sbjct 917869 GTCGCCGAGAGACCCCAGCACATGGTCATGCGTGTGGCCATTGGTATCCATGGCGATGAC 917810 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || || | || | | | | || ||| | | || | ||| || | Sbjct 917809 ATTCCCAGCGTCATCGAGACGTACAACCTGATGTCGCAAAAATTCTTCACCCACGCGTCG 917750 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || || ||||| || || || || || || ||||||||||| |||||| || | | Sbjct 917749 CCAACTCTGTTTAATGCCGGTACTCCTCATCCGCAGATGTCTTCCTGTTTCTTGGTTGCC 917690 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| |||||||||| ||| || | |||| ||||||| |||||| ||||| Sbjct 917689 ATGAAGGACGACTCCATCGACGGCATCTATGACACCCTCAAGACCTGTGCTCTGATCTCC 917630 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || || || || || || | | ||| || | | ||| || || |||||| Sbjct 917629 AAGGCTGCTGGAGGCATTGGTCTGCACATTCACAACATTAGATCCACCGGGTCTTACATC 917570 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 || ||||| ||||| ||||||||| || | || ||| | | || ||||||||| | Sbjct 917569 GCTGGAACCAACGGCACGTCCAACGGCATCATTCCAATGGTGAGAGTGTTCAACAACACC 917510 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || | ||||| |||||||| || | | || || | || || | || | ||| Sbjct 917509 GCCAGATACGTCGACCAGGGAGGCAACAAGCGGCCTGGCGCGTTTGCTCTGTACGTTGAG 917450 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||| |||| | | || |||||| | || |||||||| || || || | Sbjct 917449 CCATGGCACTCGGATATTTTTGACTTTATCGACATCCGGAAGAACCATGGTAAGGA---G 917393 Query 94258 GAG---AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 ||| || ||||||||||| ||| || || ||| | |||||||| || ||| | | Sbjct 917392 GAGATCAGAGCCAGAGACCTGTTCCCTGCGCTGTGGATTCCAGACCTGTTCATGGAGAGA 917333 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||| | ||| | | |||| || || | || || ||| || || |||||| Sbjct 917332 GTCGAGCAGAACGCTGAGTGGACGCTGTTCTCGCCTTCCGAGGCTCCAGGGCTTTCCGAC 917273 Query 94375 GTTTGTGGATCG-CGTTTTGAA-GACTTGTATGCTCGTTACGAATCGCAGGGC----AAG 94428 || | || || || || || || | || | | |||||| | | ||| | Sbjct 917272 GTGTACGG--CGACGAGTTCAAGGAGCTCTACACCAGATACGAAAAGGAAGGCCGTGGAC 917215 Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488 |||| || ||| | | || |||||||||| | || |||| | ||| ||| Sbjct 917214 GCCA-GACGGTCA---AGGCACAGAAGCTGTGGTACGCCATTTTGGAGGCCCAGACGGAA 917159 Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548 || || ||||| | ||| ||| ||||||| | |||| ||||| |||||||| || || Sbjct 917158 ACAGGCACGCCATTCATGCTGTACAAGGACGCCTGCAACTCCAAGACCAACCAGAAGAAC 917099 Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608 || || | |||||| || ||| ||||| ||| ||||||||||| | ||||| || Sbjct 917098 CTTGGTATCATCAAGTCGTCTAATTTGTGCTGCGAAATTGTCGAGTACTCATCTCCAGAG 917039 Query 94609 GAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCA-CTTTCGTGCGAGATGCCTA 94667 ||| | || |||||||| ||| || ||| ||| |||| | ||||| || || | Sbjct 917038 GAGGTGGCCGTGTGTAATTTGGCGTCGATCGCCCT-TCCAGCCTTCGT---TGAGTCCGA 916983 Query 94668 CACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG-GTCT 94726 | ||| | || | | | || |||| | || | |||| || || Sbjct 916982 CGACAATACCAGCTGGTACAACTTCGAAAAGCTGCACCAGATCAC--CAAGGTTGTCACT 916925 Query 94727 -TGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAAC-TC 94784 |||||| |||| | | ||||||| |||| || || || || ||||| ||||| || Sbjct 916924 AAGAACCTCAACAAGATCATCGACAGAAACTATTATCCTGTTCCAGAGGC-AAGAACATC 916866 Query 94785 AAACCTGAAGCATC-GGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGA 94843 ||| || ||| | |||| || | | | || |||||||| | || |||| | | || Sbjct 916865 CAACATG-CGCAACAGGCCGATTGCCGTGGGTGTCCAGGGCCTGGCCGACGTGTTCATGC 916807 Query 94844 TGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAA 94903 | || | ||||| | ||||| || || | |||| | | || ||||| | Sbjct 916806 AGCTGAGACTGCCTTTTGACTCACCAGAGGCCAGAGAGCTGAACATCCAGATTTTCGAGA 916747 Query 94904 GCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC 94963 ||| || ||||||| || | || | | | ||||| | | || | || | Sbjct 916746 CCATCTACCACGGGGCTTTGGAGGCCTCTGCCGAGCTGGCC-GTTAGG--GATGGCAAAT 916690 Query 94964 ACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023 |||| | || |||||||| | ||||| ||||| ||||||||||| ||||| Sbjct 916689 ACGAGACCTTTGAGGGATCGCCGGCGTCGCAGGGTATTTTGCAGTTCGACCTTTGGGGCA 916630 Query 95024 TGAAGCCCTCGGGTCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATC---AAACA 95078 |||||| | | ||||| |||||||| |||| | || | |||| || | Sbjct 916629 AGAAGCCAACCGATCTGTGGGACTGGGACTCGCTCAAGGCCC-----GTATCCAGAAGGA 916575 Query 95079 CGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCT 95138 || | | ||| |||| | ||||| || ||||| || || || || ||||||| | Sbjct 916574 TGGACTCAGAAATTCGCTCTTGGTGGCTCCTATGCCAACCGCGTCGACATCGCAGATTTT 916515 Query 95139 TGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGC 95198 || | ||||||| ||||| || | |||||||||| | ||| ||| | || || || Sbjct 916514 GGGATATAACGAGTGTTTCGAGCCTTACACCTCCAACATCTACTCCAGAAGAGTTCTTGC 916455 Query 95199 CGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTG 95258 || || |||| || ||||| | || | || ||||||| || || |||| Sbjct 916454 TGGTGAGTTCCAGATCGTCAACCCGTACTTGCTGAGGGACCTTGTTAACCTTGGATTGTG 916395 Query 95259 GGGTGACAAGGTCAAGAA--CCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCG 95316 | ||| | | ||||| || | | | | ||||||||| |||||||| | || Sbjct 916394 GAACGACTCGATGAAGAATTTCATCATCAA--GGACAACGGCTCGATCCAGAACTTGCCA 916337 Query 95317 CAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370 | | || |||| | |||| || ||| ||||| |||||||| |||||| Sbjct 916336 AATGTGCCACAGGAGTTGAAGGACCTGTACCGCACCGTCTGGGAGATTCCGCAG 916283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723156711720