Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq4 134 1e-26
seq2 129 6e-25
seq1 89.7 5e-13
>seq4
Length=1302532
Score = 134 bits (148), Expect = 1e-26
Identities = 332/497 (67%), Gaps = 9/497 (2%)
Strand=Plus/Minus
Query 52344 AAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATG 52403
||||| | ||||| |||| |||||| | ||| ||| | | |||||| | |
Sbjct 920278 AAGGCCGAATGGGCCATGAGATGGATCAACGACGAGGAAGCCCTGTTTGCCGAGAGACTC 920219
Query 52404 GTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTAC 52463
|| || || || || ||||| | || || || ||| |||||| | ||||| |
Sbjct 920218 GTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGCTCGTTTGCCTCGATCTTCTGG 920159
Query 52464 ATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGAC 52523
| || | || ||| | ||||| || ||||| ||| ||||||||||| | | |||
Sbjct 920158 CTCAAGAAGAGAGGACTGATGCCTGGTCTGACCTTCTCGAACGAGTTGATCTGCAGAGAC 920099
Query 52524 GAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTG 52583
|| || ||||| || |||||||| || || || | ||| | | | | | |
Sbjct 920098 GAGGGTCTGCATACCGACTTTGCCTGTCTGCTCTTCT---CGCACCTCAACAACACCCCA 920042
Query 52584 GATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTT 52643
| |||| | || | || ||| ||||| || | ||||||||| | ||
Sbjct 920041 AACAGCGACATCGTGCTCAAGATCATCACCGAGGCCGTCGAGATCGAAAAGAGATACTTC 919982
Query 52644 ACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCC-ATGTGCGAGTACAT 52702
|| | ||| ||||| ||| | |||||||| |||||| ||| | |||||| ||||| |
Sbjct 919981 ACCGACGCCCTGCCTGTCAACCTGCTGGGTATGAACT-GCAACCTGATGTGCCAGTACGT 919923
Query 52703 CGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTC-GGGCAGCCA-AAGTACTTCAACGCT 52760
|||||||| || || || ||| | | | ||| |||| || | ||| ||| ||||||
Sbjct 919922 GGAGTTTGTTGCTGACCGGCTGCTTTT--ATCTCTGGGCTGCAAGAAGCACTACAACGCC 919865
Query 52761 CGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAG 52820
|| ||||| || || ||| | ||||| || |||| |||||||||||||| ||||||
Sbjct 919864 ACAAACCCGTTCGACTTCATGGAGAACATCTCTCTTGCAGGCAAGACCAACTTCTTCGAG 919805
Query 52821 AAGCGAGTCGGCGAGTA 52837
||| ||||| ||| ||
Sbjct 919804 AAGAGAGTCTCCGATTA 919788
>seq2
Length=1516309
Score = 129 bits (142), Expect = 6e-25
Identities = 192/270 (71%), Gaps = 2/270 (1%)
Strand=Plus/Plus
Query 154248 TAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGA 154307
||||||||||||||| ||||| | | | | ||||||||| ||| |||| ||||||
Sbjct 917661 TAGATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGA 917720
Query 154308 ATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATC 154367
| || || || ||| || || || |||||| || || | |||||| ||||
Sbjct 917721 TGAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATC 917780
Query 154368 ATGCGGTACGTTTCGATGGCGTCTTCG-ATATCATCGCCGTGAATGCCGAGCGCGACGCG 154426
| | |||||| |||||| || || | || |||||||| || || || | || || ||
Sbjct 917781 AGGTTGTACGTCTCGATGACG-CTGGGAATGTCATCGCCATGGATACCAATGGCCACACG 917839
Query 154427 CATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATT 154486
||||| ||||||||| || | ||||||||| | ||||||||||||||||||
Sbjct 917840 CATGACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCG 917899
Query 154487 TTCGAGGGTTTTGTAACCGAAATACTTGTA 154516
|| || || ||| | || ||||| |||||
Sbjct 917900 CTCCAGCGTCTTGAAGCCAAAATAGTTGTA 917929
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| || | || ||| ||||| | | ||||| ||||| |||||||||||
Sbjct 177337 CCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAA 177396
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | |||||||||||| ||||||| |||| | | || ||||| |||||
Sbjct 177397 AGGGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGG 177456
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| ||||||||||| ||| || || | | || | |||||||| ||||| |||
Sbjct 177457 ATTCCTTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACC 177516
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || || || |||| || || || |||||||||||
Sbjct 177517 TCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 177563
>seq1
Length=1541475
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | |||||| | || | | | |||||||||||||||||||| ||| |
Sbjct 445748 CCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGAC 445807
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||| || || || ||||| | | | || || | || ||||| |||||
Sbjct 445808 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 445867
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| || || ||| |||| | || | | || | ||||| | ||||| ||
Sbjct 445868 ATTCCTTCCTTATC-TTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAAC 445926
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || || |||| ||||| || ||||| |||||
Sbjct 445927 CTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445974
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | |||||| | ||| | | | ||||||||||||||||| ||||||
Sbjct 445292 CCACCTCTCAATCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGAT 445351
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| |||||||| ||||| | | || || | || ||||| || ||
Sbjct 445352 AACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGG 445411
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| || || ||| |||| | || | | || | ||||| | ||||| ||
Sbjct 445412 ATTCCTTCCTTATC-TTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAAC 445470
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || || |||| ||||| || ||||| |||||
Sbjct 445471 CTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262356577040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |