Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 5e-19
seq2 100 3e-16
>seq1
Length=1541475
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || ||||||| || || |||||||| || ||||| ||| | ||| ||
Sbjct 445304 CTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGATAACGTTCTACCG 445363
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || | ||| || || ||| | || | || ||||||||| || || || ||||| |||
Sbjct 445364 TCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTA 445423
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||||||||| |||| || | ||||| || ||||| || || || || |
Sbjct 445424 TCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATG 445483
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| | ||||| || |||||||||||
Sbjct 445484 GTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445518
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || || |||| || || |||||||| || || |||||| | ||| ||
Sbjct 445760 CTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGACAGAGTTCTACCG 445819
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || | || || || || | || | || ||||||||| || || || ||||| |||
Sbjct 445820 TCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTA 445879
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||||||||| |||| || | ||||| || ||||| || || || || |
Sbjct 445880 TCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATG 445939
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| | ||||| || |||||||||||
Sbjct 445940 GTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445974
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| ||||| || | ||| || || |||||||| || || || |||||| | ||| ||
Sbjct 445073 AGTCTCAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGACAGAGTTCTA 445132
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| || | || || || || | || | || ||||||||| || || || |||||
Sbjct 445133 CCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGGATTCCTTCC 445192
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
||||| |||||||| |||| || | || | ||||| || ||||| || || || ||
Sbjct 445193 TTATCCTGAATTTTGGACTTGA-CGTTATCGATAGTGTCAGAGGACTCAACCTCAAGGGT 445251
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || || || || | ||||| || |||||||||||
Sbjct 445252 GATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 445290
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|||| || || || || || || || |||||| | ||| || || || | ||
Sbjct 446000 TGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCTAGCTGC 446059
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | || | || ||||||||| || || || ||||| ||||||||||| ||
Sbjct 446060 TTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGAATCTTC 446119
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
||||| || | ||||| ||||| || || || | ||| | |||||||||||
Sbjct 446120 GATTTGACATTATCGATAGTGTCAGAAGATTCTACCTCTAAAGTGATAGTTTTGCCGGTC 446179
Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340
| ||| || || ||||| |||||
Sbjct 446180 AAAGTCTTAACGAAAATCTGCAT 446202
>seq2
Length=1516309
Score = 100 bits (110), Expect = 3e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| |||| || | ||||| || || || |||||||| || || || | |||| |
Sbjct 177346 AGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAAAGGGTTCTG 177405
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| || | ||| || || ||| | ||||||| ||||||||| || || || ||||||
Sbjct 177406 CCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGGATTCCTTCT 177465
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|| ||||| || || |||| || | || | |||||||||||||||||| || | ||
Sbjct 177466 TTGTCTTGGATCTTGGACTTGA-CGTTATCGATGGTGTCGGAAGACTCGACCTCCAAGGT 177524
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || || ||||| | || || || ||||| |||||
Sbjct 177525 GATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 177563
Score = 95.1 bits (104), Expect = 1e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665
||||| || ||||| | |||||| ||||| |||||||||||| || ||||| ||||
Sbjct 917161 GAAACAGGCACGCCATTCATGCTGTACAAGGACGCCTGCAACTCCAAGACCAACCAGAAG 917102
Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCC 123725
||| | || | || || | |||| | |||| ||||||| |||| ||| | |
Sbjct 917101 AACCTTGGTATCATCAAGTCGTCTAATTTGTGCTGCGAAATTGTCGAGTACTCATCTCCA 917042
Query 123726 GATCAAGTGGCCGTGTGTAATTTGGCTTCGAT 123757
|| | |||||||||||||||||||| |||||
Sbjct 917041 GAGGAGGTGGCCGTGTGTAATTTGGCGTCGAT 917010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003160449720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |