Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq2 352 3e-92
seq4 123 3e-23
>seq2
Length=1516309
Score = 352 bits (390), Expect = 3e-92
Identities = 1185/1821 (65%), Gaps = 39/1821 (2%)
Strand=Plus/Plus
Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 115608
|||| | || |||||||||||| || |||||||| || | ||||||| |||| | |||
Sbjct 916119 GCCTGGGTTCTGAGGTAGTACATGCCGGTCTTGAGTCCTTTCTTCCAGCCATAGAAGTGC 916178
Query 115609 ATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 115668
|| || | ||||||| | ||||| | | | | || ||||| || || ||
Sbjct 916179 ATCGACGTCAACTTGCCCATGGTTGGGTTCTTGAGGTGGATATTCATCGACTGCGACTGG 916238
Query 115669 TCGATGAA-GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 115727
|||||| | ||| | | | || |||||||| || || | ||| | || |||||
Sbjct 916239 TCGATGTACGCGCCTCTG-TCGGCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCCCA 916297
Query 115728 CACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCC 115787
|| || | ||| |||| ||| | || | ||| | || | || ||||| |||||
Sbjct 916298 GACGGTGCGGTACAGGTCCTTCAACTCCTGTGGCACATTTGGCAAGTTCTGGATCGAGCC 916357
Query 115788 ACCTGCCTTGACCATGAGATCCTTCAT--ATCCTTTGACCAGAGACCAATCTTCTTGAGA 115845
|||||| |||| || |||||| | | || ||| | |||| || ||
Sbjct 916358 GTTGTCCTTGATGATGAAATTCTTCATCGAGTCGTT--CCACAATCCAAGGTTAACAAGG 916415
Query 115846 TCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAG 115905
||| || | || | ||||| | |||||||| || || | ||| |||
Sbjct 916416 TCCCTCAGCAAGTACGGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAG 916475
Query 115906 ATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCT 115965
||||||| ||||| ||||| || ||||| || | ||||| || || | ||| || ||
Sbjct 916476 ATGTTGGAGGTGTAAGGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCG 916535
Query 115966 GTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTG 116025
|| ||||| || |||| | || || | ||| || || | || || |||||
Sbjct 916536 GTTGGCATAGGAGCCACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTG 916595
Query 116026 AGGGCGTCCCAGTCGTAGTTGAGCT-TTGTCTCCCCCTCCCACATATCAAACTGGAGGAT 116084
|| | ||||||||| | || | ||| || | |||| | || ||||| | ||
Sbjct 916596 AGCGAGTCCCAGTCCCACA-GATCGGTTGGCTTCTTGCCCCAAAGGTCGAACTGCAAAAT 916654
Query 116085 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCT--CCGCCAAT 116142
||| || ||||| |||||||||||||| ||||| ||| ||| || ||| | ||||
Sbjct 916655 ACCCTGCGACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATC--CCTAACGGCCAGC 916712
Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCC 116202
|||| ||||| | || |||| || || ||||| ||||| | |||| |
Sbjct 916713 TCGGCAGAGGCCTCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCT 916772
Query 116203 TTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGG 116262
||||||| || ||||| | || | | || || || || || || || |||
Sbjct 916773 CTGGCCTCTGGTGAGTCAAAAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGG 916832
Query 116263 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGGATA 116321
||||| | | |||| || | | | ||| || || ||| || ||| | | |||||
Sbjct 916833 ACACCCACGGCAATCGGCCTGTTGCGCATGTTGGATGTTCTTGCC-TCTGGAACAGGATA 916891
Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381
| | || || ||||| | | | || || || || ||||||||||| ||||| | || ||
Sbjct 916892 ATAGTTTCTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAG 916951
Query 116382 CTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT--ACTTAGG----AAGGGCGAT 116435
||||||| | | | | || || | || | | | || ||| |||||||||
Sbjct 916952 CTTTTCGAAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCGAT 917011
Query 116436 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 116495
||||||| ||||||||| | ||| || | | |||||| | |||||| ||
Sbjct 917012 CGACGCCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAGCA 917071
Query 116496 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 116555
|||||| || ||| ||| | || | |||||| || || | ||| | ||| || || ||
Sbjct 917072 CAAATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTC 917131
Query 116556 CTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA- 116614
|||||| ||||| ||||||| || || ||||| |||| || | ||| || | ||| |
Sbjct 917132 CTTGTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAG 917191
Query 116615 CATCGGCGGCTGGCACAGT--GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 116672
| || | | || | || || ||||| | || || |||| ||||| | ||||||||
Sbjct 917192 CTTCTGTGCCTTG-ACCGTCTGGCGTC--CACGGCCTTCCTTTTCGTATCTGGTGTAGAG 917248
Query 116673 GGCCTCAAACTCTTCACCC-ACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGA 116731
||| ||||| || || ||| | || || |||||||| |||| || |||| |
Sbjct 917249 CTCCTTGAACTCGTCGCCGTACA-CGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACA 917307
Query 116732 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 116791
| | ||| | | | || ||| || | || |||||| |||||||| ||||| ||||| |
Sbjct 917308 GCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAG 917367
Query 116792 AGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850
||| || || | | | || || || | | || || || || | || | ||||
Sbjct 917368 GGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCA-TGGTTCTTCCGGATGTCGATAAAG 917426
Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACAC------CGCGATTGACCCCTTGCGA 116904
|| | ||||||| |||||| || || | ||||| |||| | || ||||
Sbjct 917427 TCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTG 917486
Query 116905 CGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964
| || ||||| || || || || || ||| || || | | ||||||||||||
Sbjct 917487 CCTCC---CTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATG 917543
Query 116965 CCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATG 117024
|| | || ||| || || || || |||| | ||| ||| | | ||| |||
Sbjct 917544 CCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATG 917603
Query 117025 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAG 117084
|||| |||||| || || || ||| ||||| | || || | |||| || | |||
Sbjct 917604 TGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAG 917663
Query 117085 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTT 117144
|| || ||||| ||||| |||| | || | | ||| ||| ||||| || ||
Sbjct 917664 ATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGA 917723
Query 117145 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTA 117204
|| ||||| || || || || ||||| | ||||||| |||| | ||| ||||||
Sbjct 917724 GGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGG 917783
Query 117205 TCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATA 117264
| ||| ||||| | ||| ||||||||| || || || ||||| || | || |||||
Sbjct 917784 TTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCATG 917843
Query 117265 AACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCC 117324
| ||||| |||||| | || | | ||||| | | || ||| || | ||||
Sbjct 917844 ACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTCC 917903
Query 117325 AAGGTCTTGAGACCAAAATAG 117345
| ||||||| |||||||||
Sbjct 917904 AGCGTCTTGAAGCCAAAATAG 917924
>seq4
Length=1302532
Score = 123 bits (136), Expect = 3e-23
Identities = 158/215 (73%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591
|| ||||||||||| | | |||| | || ||||||||| |||||| ||||| || ||
Sbjct 920088 TGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACCAGGCATCAGTCCT 920147
Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651
| |||||| | |||||| |||| ||| |||||||||||||| || ||||||||
Sbjct 920148 CTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAATACCCTCCACGGCA 920207
Query 127652 GCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCGC 127710
|| ||||||| || | ||||||||| || | | | || | | ||| |||| ||
Sbjct 920208 GCAAACGCAACGAGTCTCTCGGCAAA-CAGGGCTTCCTCGTCGTTGATCCATCTCATGGC 920266
Query 127711 CCACTGTGCCTTTTTCTCGATACATGGGACGGTCT 127745
||| | ||||| | || ||||||||||| |||||
Sbjct 920267 CCATTCGGCCTTCTCCTTGATACATGGGATGGTCT 920301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507146318120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |