Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2 352 3e-92 seq4 123 3e-23 >seq2 Length=1516309 Score = 352 bits (390), Expect = 3e-92 Identities = 1185/1821 (65%), Gaps = 39/1821 (2%) Strand=Plus/Plus Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 115608 |||| | || |||||||||||| || |||||||| || | ||||||| |||| | ||| Sbjct 916119 GCCTGGGTTCTGAGGTAGTACATGCCGGTCTTGAGTCCTTTCTTCCAGCCATAGAAGTGC 916178 Query 115609 ATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 115668 || || | ||||||| | ||||| | | | | || ||||| || || || Sbjct 916179 ATCGACGTCAACTTGCCCATGGTTGGGTTCTTGAGGTGGATATTCATCGACTGCGACTGG 916238 Query 115669 TCGATGAA-GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 115727 |||||| | ||| | | | || |||||||| || || | ||| | || ||||| Sbjct 916239 TCGATGTACGCGCCTCTG-TCGGCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCCCA 916297 Query 115728 CACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCC 115787 || || | ||| |||| ||| | || | ||| | || | || ||||| ||||| Sbjct 916298 GACGGTGCGGTACAGGTCCTTCAACTCCTGTGGCACATTTGGCAAGTTCTGGATCGAGCC 916357 Query 115788 ACCTGCCTTGACCATGAGATCCTTCAT--ATCCTTTGACCAGAGACCAATCTTCTTGAGA 115845 |||||| |||| || |||||| | | || ||| | |||| || || Sbjct 916358 GTTGTCCTTGATGATGAAATTCTTCATCGAGTCGTT--CCACAATCCAAGGTTAACAAGG 916415 Query 115846 TCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAG 115905 ||| || | || | ||||| | |||||||| || || | ||| ||| Sbjct 916416 TCCCTCAGCAAGTACGGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAG 916475 Query 115906 ATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCT 115965 ||||||| ||||| ||||| || ||||| || | ||||| || || | ||| || || Sbjct 916476 ATGTTGGAGGTGTAAGGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCG 916535 Query 115966 GTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTG 116025 || ||||| || |||| | || || | ||| || || | || || ||||| Sbjct 916536 GTTGGCATAGGAGCCACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTG 916595 Query 116026 AGGGCGTCCCAGTCGTAGTTGAGCT-TTGTCTCCCCCTCCCACATATCAAACTGGAGGAT 116084 || | ||||||||| | || | ||| || | |||| | || ||||| | || Sbjct 916596 AGCGAGTCCCAGTCCCACA-GATCGGTTGGCTTCTTGCCCCAAAGGTCGAACTGCAAAAT 916654 Query 116085 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCT--CCGCCAAT 116142 ||| || ||||| |||||||||||||| ||||| ||| ||| || ||| | |||| Sbjct 916655 ACCCTGCGACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATC--CCTAACGGCCAGC 916712 Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCC 116202 |||| ||||| | || |||| || || ||||| ||||| | |||| | Sbjct 916713 TCGGCAGAGGCCTCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCT 916772 Query 116203 TTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGG 116262 ||||||| || ||||| | || | | || || || || || || || ||| Sbjct 916773 CTGGCCTCTGGTGAGTCAAAAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGG 916832 Query 116263 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGGATA 116321 ||||| | | |||| || | | | ||| || || ||| || ||| | | ||||| Sbjct 916833 ACACCCACGGCAATCGGCCTGTTGCGCATGTTGGATGTTCTTGCC-TCTGGAACAGGATA 916891 Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381 | | || || ||||| | | | || || || || ||||||||||| ||||| | || || Sbjct 916892 ATAGTTTCTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAG 916951 Query 116382 CTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT--ACTTAGG----AAGGGCGAT 116435 ||||||| | | | | || || | || | | | || ||| ||||||||| Sbjct 916952 CTTTTCGAAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCGAT 917011 Query 116436 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 116495 ||||||| ||||||||| | ||| || | | |||||| | |||||| || Sbjct 917012 CGACGCCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAGCA 917071 Query 116496 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 116555 |||||| || ||| ||| | || | |||||| || || | ||| | ||| || || || Sbjct 917072 CAAATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTC 917131 Query 116556 CTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA- 116614 |||||| ||||| ||||||| || || ||||| |||| || | ||| || | ||| | Sbjct 917132 CTTGTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAG 917191 Query 116615 CATCGGCGGCTGGCACAGT--GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 116672 | || | | || | || || ||||| | || || |||| ||||| | |||||||| Sbjct 917192 CTTCTGTGCCTTG-ACCGTCTGGCGTC--CACGGCCTTCCTTTTCGTATCTGGTGTAGAG 917248 Query 116673 GGCCTCAAACTCTTCACCC-ACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGA 116731 ||| ||||| || || ||| | || || |||||||| |||| || |||| | Sbjct 917249 CTCCTTGAACTCGTCGCCGTACA-CGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACA 917307 Query 116732 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 116791 | | ||| | | | || ||| || | || |||||| |||||||| ||||| ||||| | Sbjct 917308 GCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAG 917367 Query 116792 AGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850 ||| || || | | | || || || | | || || || || | || | |||| Sbjct 917368 GGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCA-TGGTTCTTCCGGATGTCGATAAAG 917426 Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACAC------CGCGATTGACCCCTTGCGA 116904 || | ||||||| |||||| || || | ||||| |||| | || |||| Sbjct 917427 TCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTG 917486 Query 116905 CGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964 | || ||||| || || || || || ||| || || | | |||||||||||| Sbjct 917487 CCTCC---CTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATG 917543 Query 116965 CCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATG 117024 || | || ||| || || || || |||| | ||| ||| | | ||| ||| Sbjct 917544 CCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATG 917603 Query 117025 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAG 117084 |||| |||||| || || || ||| ||||| | || || | |||| || | ||| Sbjct 917604 TGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAG 917663 Query 117085 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTT 117144 || || ||||| ||||| |||| | || | | ||| ||| ||||| || || Sbjct 917664 ATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGA 917723 Query 117145 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTA 117204 || ||||| || || || || ||||| | ||||||| |||| | ||| |||||| Sbjct 917724 GGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGG 917783 Query 117205 TCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATA 117264 | ||| ||||| | ||| ||||||||| || || || ||||| || | || ||||| Sbjct 917784 TTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCATG 917843 Query 117265 AACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCC 117324 | ||||| |||||| | || | | ||||| | | || ||| || | |||| Sbjct 917844 ACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCGCTCC 917903 Query 117325 AAGGTCTTGAGACCAAAATAG 117345 | ||||||| ||||||||| Sbjct 917904 AGCGTCTTGAAGCCAAAATAG 917924 >seq4 Length=1302532 Score = 123 bits (136), Expect = 3e-23 Identities = 158/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591 || ||||||||||| | | |||| | || ||||||||| |||||| ||||| || || Sbjct 920088 TGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACCAGGCATCAGTCCT 920147 Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651 | |||||| | |||||| |||| ||| |||||||||||||| || |||||||| Sbjct 920148 CTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAATACCCTCCACGGCA 920207 Query 127652 GCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCGC 127710 || ||||||| || | ||||||||| || | | | || | | ||| |||| || Sbjct 920208 GCAAACGCAACGAGTCTCTCGGCAAA-CAGGGCTTCCTCGTCGTTGATCCATCTCATGGC 920266 Query 127711 CCACTGTGCCTTTTTCTCGATACATGGGACGGTCT 127745 ||| | ||||| | || ||||||||||| ||||| Sbjct 920267 CCATTCGGCCTTCTCCTTGATACATGGGATGGTCT 920301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507146318120