Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq4 197 2e-45 seq2 150 3e-31 >seq4 Length=1302532 Score = 197 bits (218), Expect = 2e-45 Identities = 547/823 (66%), Gaps = 17/823 (2%) Strand=Plus/Plus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 ||||| ||| | || || |||||||||| |||||||||||||| | | || || Sbjct 919781 CTTCTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGCAAGAGAGATGTT 919840 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747 |||||||| |||| ||||| | ||| ||| ||||| | || |||| || Sbjct 919841 CTCCATGAAGTCGAACGGGTTTGTGGCGTTGTAGTGCTTCTTGCAGCCCAGAGATAAAAG 919900 Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG 159807 || || ||| || ||||| || | ||| |||||| | | ||||| || |||||||| Sbjct 919901 CAGCCGGTCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTTCATACCCAGCAG 919960 Query 159808 CCTAACGGGGAGCGCTTCCGACA-GAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAA 159866 | || || || || || | | | | ||| || || |||||||| || ||||| | | Sbjct 919961 GTTGACAGGCAGGGCGTCGGTGAAGTATCTCTTT-TCGATCTCGACGGCCTCGGTGATGA 920019 Query 159867 TCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAA--TGTGGTCCTTAAACAGGAGGCA 159924 ||| ||| |||| | || | | | ||| || ||| | || || || || Sbjct 920020 TCTT-GAG-CACGAT-GT--CGCTGTTTGGGGTGTTGTTGAGGTGCGAGAAGAGCAGACA 920074 Query 159925 CGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCC 159984 ||||||||| ||||| |||||||| | |||| |||||||| || | | | || || Sbjct 920075 GGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACC 920134 Query 159985 CGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGAT 160044 ||||| | || | | |||||||| || || | ||||| | || || || || Sbjct 920135 AGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAAT 920194 Query 160045 CCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGT 160104 ||||||||||| |||||||| ||||| ||||| |||| ||| | ||| | | | Sbjct 920195 ACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAACAGGGCTTCCTCGTCGTTGAT 920254 Query 160105 CCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTT--A 160162 ||| || |||||||||| ||||||| ||| || || ||| ||| | |||||| | Sbjct 920255 CCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGGCGTTGAA 920314 Query 160163 AACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATT 160222 || | || || ||||| ||||||| || | ||||| ||||||| || Sbjct 920315 AAGGAACTCAGCT--TCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGAGTACGTT 920372 Query 160223 TCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC 160282 || | ||| | || || || ||||| || ||||||| | | ||||| || Sbjct 920373 TCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTCAGGAACT 920432 Query 160283 TGCACCTCCTGTGTGAACCT-TTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGC 160341 |||||||| | ||| | | |||| || || | || || | ||||| | || || Sbjct 920433 TGCACCTCGGCAGAGAAGTTCTCGACCAAG-TTCTCGTTGACAATGCCGTCCGAAGCAGC 920491 Query 160342 AAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCA 160401 |||||| |||||||| || | || | |||||||| | ||||||||| || | ||| Sbjct 920492 AAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGTTGTCGTTGAGTCTGTTGTTCCA 920551 Query 160402 GT-GTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCA 160443 || ||| || ||| | || || ||| | || || ||| |||| Sbjct 920552 GTCGTG-CAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCA 920593 >seq2 Length=1516309 Score = 150 bits (166), Expect = 3e-31 Identities = 503/766 (66%), Gaps = 24/766 (3%) Strand=Plus/Plus Query 203838 TCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGC 203897 ||| ||| || ||||| || || || | |||| | | |||| || |||||||||| Sbjct 916084 TCTGGTCAACGGTGAATTGGATCGCAGCAGCAGCAGCCTGGGTTCTGAGGTAGTACATGC 916143 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 ||||||| || || |||| ||| || || | |||||| || | || |||| || | | | Sbjct 916144 CGGTCTTGAGTCCTTTCTTCCAGCCATAGAAGTGCATCGACGTCAACTTGCCCATGGTTG 916203 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 ||| | ||| || |||| ||||| ||||||||| | ||||| | || || Sbjct 916204 GGTTCTTGAGGTGGATATTCATCGACTGCGACTGGTCGATG-TACGCGCCTCTGTCGGCC 916262 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076 ||||| | ||||||| | ||||||| ||||||||| || || | ||| ||| | Sbjct 916263 GCCATGTCGATAATGCTTTTCTGCGGAATCTCCCAGACGGTGCGGTACAGGTCCTTCAAC 916322 Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTC---GGCCATCAGTCTCAT 204132 | || ||||||| || || || || ||||||||||||||| | || | || | Sbjct 916323 TCCTGTGGCACAT-TTGGCAAGTTCTGGATCGAGCCGTTGTCCTTGATGATGAAATTCTT 916381 Query 204133 CCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGAT 204192 | ||| || | ||||| || | | | || |||| || || || ||||||| Sbjct 916382 CATCGAGTCGT---TCCACAATCCAAGGTTAACAAGGTCCCTCAGCAAGTACGGGTTGAC 916438 Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252 |||||| || || || | || || | || || | | | |||| |||| | || ||||| Sbjct 916439 GATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAGATGTTGGAGGTGTAAGGCTCGAA 916498 Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312 |||||| | || |||||||| | || || || ||||| ||||||| | || Sbjct 916499 ACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATAGGAGCCACCAAGAG 916558 Query 204313 GGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGC 204372 || || | | || | || |||| | | ||| || ||| |||||| || | Sbjct 916559 CGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCCCAGTCCCACAGATC 916618 Query 204373 ACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTT--GACTGACTGGGCTGCCC 204430 | || ||| |||||| | ||||||||| || || || | ||| | | | | | ||| Sbjct 916619 GGTTGGCTTCTTGCCCCAAAGGTCGAACTGCAAAATACCCTGCGAC-GCCGGCGAT-CCC 916676 Query 204431 TTGTACG--TCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGT 204488 | | | ||| || | | |||| | ||||||| | ||||| ||| || Sbjct 916677 TCAAAGGTCTCGTATTTGCC--ATCCCTAACGGCCAGCTCGGCAGAGGCCTCCAAAGCCC 916734 Query 204489 GATAGTACATGGTCTCAAAGATCTGAACGTTTA-ATCTGGCGGCCTCCGTTCCGTCAAAC 204547 | ||| |||||||| || ||||| | ||| | ||| |||||| | | |||||| Sbjct 916735 CGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCT-CTGGCCTCTGGTGAGTCAAAA 916793 Query 204548 GCCAGACCCAGCATGGCA--AACACGTCCGCCAAGCCCTGCACTCC 204591 | ||| | |||| ||| |||||||| |||| |||||| || || Sbjct 916794 GGCAGTCTCAGC--TGCATGAACACGTCGGCCAGGCCCTGGACACC 916837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155130423920