Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq4 197 2e-45
seq2 150 3e-31
>seq4
Length=1302532
Score = 197 bits (218), Expect = 2e-45
Identities = 547/823 (66%), Gaps = 17/823 (2%)
Strand=Plus/Plus
Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687
||||| ||| | || || |||||||||| |||||||||||||| | | || ||
Sbjct 919781 CTTCTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGCAAGAGAGATGTT 919840
Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747
|||||||| |||| ||||| | ||| ||| ||||| | || |||| ||
Sbjct 919841 CTCCATGAAGTCGAACGGGTTTGTGGCGTTGTAGTGCTTCTTGCAGCCCAGAGATAAAAG 919900
Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG 159807
|| || ||| || ||||| || | ||| |||||| | | ||||| || ||||||||
Sbjct 919901 CAGCCGGTCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTTCATACCCAGCAG 919960
Query 159808 CCTAACGGGGAGCGCTTCCGACA-GAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAA 159866
| || || || || || | | | | ||| || || |||||||| || ||||| | |
Sbjct 919961 GTTGACAGGCAGGGCGTCGGTGAAGTATCTCTTT-TCGATCTCGACGGCCTCGGTGATGA 920019
Query 159867 TCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAA--TGTGGTCCTTAAACAGGAGGCA 159924
||| ||| |||| | || | | | ||| || ||| | || || || ||
Sbjct 920020 TCTT-GAG-CACGAT-GT--CGCTGTTTGGGGTGTTGTTGAGGTGCGAGAAGAGCAGACA 920074
Query 159925 CGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCC 159984
||||||||| ||||| |||||||| | |||| |||||||| || | | | || ||
Sbjct 920075 GGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACC 920134
Query 159985 CGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGAT 160044
||||| | || | | |||||||| || || | ||||| | || || || ||
Sbjct 920135 AGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAAT 920194
Query 160045 CCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGT 160104
||||||||||| |||||||| ||||| ||||| |||| ||| | ||| | | |
Sbjct 920195 ACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAACAGGGCTTCCTCGTCGTTGAT 920254
Query 160105 CCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTT--A 160162
||| || |||||||||| ||||||| ||| || || ||| ||| | |||||| |
Sbjct 920255 CCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGGCGTTGAA 920314
Query 160163 AACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATT 160222
|| | || || ||||| ||||||| || | ||||| ||||||| ||
Sbjct 920315 AAGGAACTCAGCT--TCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGAGTACGTT 920372
Query 160223 TCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC 160282
|| | ||| | || || || ||||| || ||||||| | | ||||| ||
Sbjct 920373 TCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTCAGGAACT 920432
Query 160283 TGCACCTCCTGTGTGAACCT-TTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGC 160341
|||||||| | ||| | | |||| || || | || || | ||||| | || ||
Sbjct 920433 TGCACCTCGGCAGAGAAGTTCTCGACCAAG-TTCTCGTTGACAATGCCGTCCGAAGCAGC 920491
Query 160342 AAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCA 160401
|||||| |||||||| || | || | |||||||| | ||||||||| || | |||
Sbjct 920492 AAAGAAGGCCAACACTCTCGAAACAAAGTATCTCTCGTTGTCGTTGAGTCTGTTGTTCCA 920551
Query 160402 GT-GTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCA 160443
|| ||| || ||| | || || ||| | || || ||| ||||
Sbjct 920552 GTCGTG-CAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCA 920593
>seq2
Length=1516309
Score = 150 bits (166), Expect = 3e-31
Identities = 503/766 (66%), Gaps = 24/766 (3%)
Strand=Plus/Plus
Query 203838 TCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGC 203897
||| ||| || ||||| || || || | |||| | | |||| || ||||||||||
Sbjct 916084 TCTGGTCAACGGTGAATTGGATCGCAGCAGCAGCAGCCTGGGTTCTGAGGTAGTACATGC 916143
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
||||||| || || |||| ||| || || | |||||| || | || |||| || | | |
Sbjct 916144 CGGTCTTGAGTCCTTTCTTCCAGCCATAGAAGTGCATCGACGTCAACTTGCCCATGGTTG 916203
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016
||| | ||| || |||| ||||| ||||||||| | ||||| | || ||
Sbjct 916204 GGTTCTTGAGGTGGATATTCATCGACTGCGACTGGTCGATG-TACGCGCCTCTGTCGGCC 916262
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076
||||| | ||||||| | ||||||| ||||||||| || || | ||| ||| |
Sbjct 916263 GCCATGTCGATAATGCTTTTCTGCGGAATCTCCCAGACGGTGCGGTACAGGTCCTTCAAC 916322
Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTC---GGCCATCAGTCTCAT 204132
| || ||||||| || || || || ||||||||||||||| | || | || |
Sbjct 916323 TCCTGTGGCACAT-TTGGCAAGTTCTGGATCGAGCCGTTGTCCTTGATGATGAAATTCTT 916381
Query 204133 CCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGAT 204192
| ||| || | ||||| || | | | || |||| || || || |||||||
Sbjct 916382 CATCGAGTCGT---TCCACAATCCAAGGTTAACAAGGTCCCTCAGCAAGTACGGGTTGAC 916438
Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252
|||||| || || || | || || | || || | | | |||| |||| | || |||||
Sbjct 916439 GATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAGATGTTGGAGGTGTAAGGCTCGAA 916498
Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312
|||||| | || |||||||| | || || || ||||| ||||||| | ||
Sbjct 916499 ACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATAGGAGCCACCAAGAG 916558
Query 204313 GGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGC 204372
|| || | | || | || |||| | | ||| || ||| |||||| || |
Sbjct 916559 CGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCCCAGTCCCACAGATC 916618
Query 204373 ACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTT--GACTGACTGGGCTGCCC 204430
| || ||| |||||| | ||||||||| || || || | ||| | | | | | |||
Sbjct 916619 GGTTGGCTTCTTGCCCCAAAGGTCGAACTGCAAAATACCCTGCGAC-GCCGGCGAT-CCC 916676
Query 204431 TTGTACG--TCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGT 204488
| | | ||| || | | |||| | ||||||| | ||||| ||| ||
Sbjct 916677 TCAAAGGTCTCGTATTTGCC--ATCCCTAACGGCCAGCTCGGCAGAGGCCTCCAAAGCCC 916734
Query 204489 GATAGTACATGGTCTCAAAGATCTGAACGTTTA-ATCTGGCGGCCTCCGTTCCGTCAAAC 204547
| ||| |||||||| || ||||| | ||| | ||| |||||| | | ||||||
Sbjct 916735 CGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCT-CTGGCCTCTGGTGAGTCAAAA 916793
Query 204548 GCCAGACCCAGCATGGCA--AACACGTCCGCCAAGCCCTGCACTCC 204591
| ||| | |||| ||| |||||||| |||| |||||| || ||
Sbjct 916794 GGCAGTCTCAGC--TGCATGAACACGTCGGCCAGGCCCTGGACACC 916837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795155130423920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |