Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq7 197 5e-45 seq1 149 2e-30 >seq7 Length=988507 Score = 197 bits (218), Expect = 5e-45 Identities = 796/1246 (64%), Gaps = 46/1246 (4%) Strand=Plus/Minus Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGT 451306 ||||||||||| | ||| || | ||||||||| | | |||||| | || | || Sbjct 613843 GAAGAAATTTCTGCCATGATTTTGGGCAAAATGAAACAGATTGCAGAAGACTACCTAGGA 613784 Query 451307 TCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAA 451366 ||| || | || || ||||||| || || || ||||||||||| ||| | ||| Sbjct 613783 AAGAAAGTGACCCACGCTGTCGTTACTGTCCCAGCATACTTCAATGATGCGCAAAGACAA 613724 Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 |||||||| ||||||||| ||||||||||| | ||||| ||||| |||| || || Sbjct 613723 GCAACTAAGGATGCAGGAACGATTGCTGGTTTGGAGGTTCTGAGAATTGTTAACGAGCCA 613664 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATT 451486 || ||||| ||| | |||||||| | ||| || | ||| || |||||| ||||| Sbjct 613663 ACCGCAGCAGCTATTGCATATGG-TTTGGATAA--GACAGA---CGAGGAAAAACATATT 613610 Query 451487 TTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGG 451546 |||| | |||||| |||||||| ||| |||| |||| | || | |||| | || Sbjct 613609 ATAGTCTATGATTTGGGTGGAGGTACTTTTGATGTTTCTCTCCTCACCATTGCTGGAGGA 613550 Query 451547 GTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 | ||||||||| ||| || |||||||||||| | || || || || |||| || Sbjct 613549 GCATTTGAAGTCTTGGCTACTGCGGGTGATACTCATTTGGGTGGAGAGGACTTTGACTAT 613490 Query 451607 GCAATTGTGGAATGGTTGAAAACTGATGTTCAACGA-AAACTAAAAGTAGATATTTCTAC 451665 | |||| | || | | | | ||||| | || | | | |||||| | Sbjct 613489 AGAGTTGTTAGACATTTCATCAAAG-TTTTCAAGAAGAAGCATGGAATTGATATTAGTGA 613431 Query 451666 TAACCAAAAAGCACTTAGACGTCTTAAA-ACATCAGCAGAAAAAGCTAAAATTACACTCA 451724 ||| ||||||| |||| ||||| | | | || ||||| || | ||||| Sbjct 613430 CAACTCAAAAGCA-TTAGCAAAATTAAAGAGAGAGGTTGAGAAAGCGAAGAGAACACT-- 613374 Query 451725 GTTCAACACAAA---CTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATTATG 451781 || | |||| | ||| | ||| | ||||| ||| || || ||||| |||| | Sbjct 613373 -GTCCTCTCAAATGTCGACTCGCATAGAGATTGACTCTTTCGTGGACGGAATTGATTTTT 613315 Query 451782 CTACTACTCTTACCCGTGCTAAATTTGA----------ATCAATTTGTTCCAGTATTTTT 451831 | |||| | | || || ||||| || |||||||| | | || Sbjct 613314 CAGAATCTCTATCAAGAGCAAAGTTTGAGGAGCTGAATATGGATTTGTTCAAAAAAACTT 613255 Query 451832 GCACGGGTAATGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAA 451891 ||||||| || | || || | |||| ||||||| | |||| || Sbjct 613254 ----------TGAAACCAGTGCAGCAGGTTCTTGATGACGCTAAAATGAAGCCAGATGAA 613205 Query 451892 ATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTG 451951 || ||||| | || | || || || ||||| |||||||| ||| ||||||| | | Sbjct 613204 ATAGATGATGTGGTTTTCGTCGGTGGATCTACTCGAATTCCAAAAGTTCAAGAGTTAATC 613145 Query 451952 TCTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCA 452011 || || |||||| | | | ||| || | ||||| || || ||||| || Sbjct 613144 GAGAATTTCTTCAATGGAAAAAAGATTTCTAAAGGCATCAATCCAGACGAGGCTGTGGCG 613085 Query 452012 TATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGAT 452071 | |||||||| ||||| | || | | || ||||| || || | | | ||| Sbjct 613084 TTCGGTGCTGCTGTTCAGGGAGGTGTGCT------TTCAGGCGAGGAGGGAGTTGAAGAC 613031 Query 452072 ATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATG 452131 || |||| | ||||| | || || ||||||| |||| || | || || | ||| Sbjct 613030 ATAGTGTTGATCGATGTCAACCCACTCACTCTTGGTATTGAGACTTCCGGAGGTGTCATG 612971 Query 452132 ACTAATTTAATTAAACGAGGA--ACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTA 452189 || | || || ||| |||| ||| |||||||| ||||| || | |||| | Sbjct 612970 ACCACATTGATCAAA--AGGAACACTCCTATTCCTACACAAAAGTCCCAGATATTTTCCA 612913 Query 452190 CAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGA 452249 | || ||||||||| || | ||| || ||||| | |||||| ||| | || ||| Sbjct 612912 CTGCCGCTGATAACCAGCCGGTTGTCTTGATCCAAGTCTATGAAGGTGAAAGAGCGATGG 612853 Query 452250 CACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGG 452309 | |||||||||| ||||| | ||| | || || || ||| |||||| | Sbjct 612852 CCAAAGATAATAATCTGTTAGGAAAGTTTGAGTTAACAGGTATACCACCTGCGCCAAGAG 612793 Query 452310 GAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTG 452369 | |||||||| || | || | | | |||| | || |||||| | || || || Sbjct 612792 GCGTCCCTCAAATCGAGGTCACGTTTACTCTTGACTCTAACGGTATTTTGAAAGTTTCTG 612733 Query 452370 CAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTT 452429 | ||| ||| | | ||||| || | || |||||||| |||||||| || Sbjct 612732 CTACTGATAAAGGAACAGGAAAGTCCAATTCTATAACAATTACCAATGATAAGGGTCGCC 612673 Query 452430 TATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATT 452475 | || || || || || ||||| | | || |||||||| || || Sbjct 612672 TTTCGAAGGAGGAAATCGAAAAGAAAATCGAGGAAGCAGAGAAGTT 612627 Score = 141 bits (156), Expect = 4e-28 Identities = 260/378 (69%), Gaps = 5/378 (1%) Strand=Plus/Minus Query 451220 AAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATG 451279 || ||||| || || ||| |||| |||||||| || |||||||| | || || ||| Sbjct 313885 AAGGGTGAGACCAAGGTGTTTACTCCAGAAGAAATCTCGTCTATGGTGTTGACCAAGATG 313826 Query 451280 AAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCC 451339 || || || || || | | || | | |||| || || || ||||||||||| Sbjct 313825 AAGGAGACCGCCGAGTCTTTCCTCGGAACCACCGTTAAGGACGCTGTTATTACTGTTCCA 313766 Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399 ||||| ||||| ||| | ||| | ||||| || || ||||| || ||||||||| | Sbjct 313765 GCTTACTTCAACGATTCCCAAAGACAAGCCACCAAGGATGCCGGTTTGATTGCTGGTCTT 313706 Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459 ||||| | |||| ||||| || ||||| || || ||| | || || || || ||| | Sbjct 313705 AATGTCATGAGAATCATTAACGAGCCTACTGCTGCCGCTATTGCCTACGGTCT-GGACA- 313648 Query 451460 TCAAAAGAAACA-GAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGA 451518 | |||| || | ||| | || |||| | || ||| ||||||||||||| || Sbjct 313647 --AGAAGAGCCAGGGTGAACAGAACGTTTTGATTTTCGATCTTGGTGGAGGAACCTTCGA 313590 Query 451519 TACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATAC 451578 | ||| | || || ||||| || || | || || || ||||| || |||||||| Sbjct 313589 TGTTTCGCTTCTGTCCATTGAGGACGGTATTTTCGAGGTCAAGGCTACTGCCGGTGATAC 313530 Query 451579 TCATCTAGGAGGTGAAGA 451596 || | ||||||||||| Sbjct 313529 CCACTTGGGAGGTGAAGA 313512 >seq1 Length=1541475 Score = 149 bits (164), Expect = 2e-30 Identities = 284/416 (68%), Gaps = 3/416 (1%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || ||||| | ||||| || | | || ||||| || || || |||| || ||| Sbjct 1418499 GGCAAGCCTCACATTCAGGTCGAGTTCAAGGGTGAGACCAAGGTGTTCACTCCAGAGGAA 1418440 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || ||||| || || || ||||||||||||||||| || || ||| | Sbjct 1418439 ATCTCGTCGATGGTGCTGACCAAGATGAAAGAAACAGCAGAGTCGTACATGGGTGGCAAA 1418380 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || ||||| || || || ||||| || || || ||||| || | ||| | |||||||| Sbjct 1418379 GTGACTGACGCCGTCATCACTGTCCCTGCCTACTTCAACGACTCGCAAAGACAAGCAACC 1418320 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || | ||||| ||||| ||||| || |||| || || || || || || Sbjct 1418319 AAGGATGCCGGTCTGATTGCCGGTTTGAATGTGCTCAGAATCATCAACGAGCCAACCGCC 1418260 Query 451433 GCTGCTCTAGCATATGGACT--AGGAAAATCA-AAAGAAACAGAAGaaaaaaaTATTTTA 451489 ||||| | || || || || | | || | ||| | || ||| |||||||||| Sbjct 1418259 GCTGCCATCGCCTACGGTCTTGATAAGAAGGAGCAAGGTAAAGGCGAACAAAATATTTTG 1418200 Query 451490 GTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTA 451549 | || ||| ||||||| || || ||| |||| | | || ||||| || || | Sbjct 1418199 ATTTTCGATCTTGGTGGTGGTACCTTCGATGTTTCTTTGTTGTCCATTGACGAGGGTATC 1418140 Query 451550 TTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||||| || ||||| || |||||||| || | || ||||| || | ||||| Sbjct 1418139 TTTGAGGTTAAGGCTACGGCCGGTGATACCCACTTGGGTGGTGAGGACTTCGATAA 1418084 Score = 138 bits (152), Expect = 4e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||||||||| ||||||| || || || || ||||| ||||| || ||| Sbjct 445290 ATGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445231 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || |||||||| |||||||||||||| || ||||| || Sbjct 445230 GACACTATCGATAACGTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAG 445171 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | ||||| | || || || || ||||| || |||||| || | ||||| || Sbjct 445170 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445111 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || ||||| || || || ||||||||||| Sbjct 445110 ATTCAGAAGGAATCTACTCTTCATTTGGTTTTGAGACTGAGAGG 445067 Score = 134 bits (148), Expect = 5e-26 Identities = 164/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||||||||| |||| || || || || || ||||| ||||| || ||| Sbjct 445974 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445915 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || ||||||||||||||||||||||| |||||||| || Sbjct 445914 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 445855 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | ||||| | || || || || ||||| || |||||| || | ||||| || Sbjct 445854 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445795 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || | ||| | || || ||| ||||||| Sbjct 445794 ATTCAAAAGGAGTCGACCTTGCACCTGGTTTTGAGATTGAGAGG 445751 Score = 131 bits (144), Expect = 7e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||||||||| || |||| || |||||||| ||| | || || ||||| || Sbjct 446203 AATGCAGATTTTCGTTAAGACTTTGACCGGCAAAACTATCACTTTAGAGGTAGAATCTTC 446144 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | || || | | ||| || |||||||||||||||||||| |||||||| || Sbjct 446143 TGACACTATCGATAATGTCAAATCGAAGATTCAAGATAAGGAAGGAATCCCTCCTGACCA 446084 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | ||||| | || || || || ||||| || |||||| || | ||||| || Sbjct 446083 GCAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAA 446024 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | ||||| || | ||| ||||||| Sbjct 446023 CATTCAGAAAGAGTCTACCTTGCACTTGGTCCTGAGATTGAGAGG 445979 Score = 129 bits (142), Expect = 2e-24 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||||||||| |||| || || || || || ||||| ||||| || ||| Sbjct 445518 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445459 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || ||||||||||||||||||||||| || ||||| || Sbjct 445458 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAG 445399 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | |||||| | || || ||||| ||||| || ||||| || | || ||||| Sbjct 445398 CAAAGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAAC 445339 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || | || | || || ||| ||||||| Sbjct 445338 ATTCAAAAGGAGTCGACCTTGCATCTGGTTTTGAGATTGAGAGG 445295 Score = 125 bits (138), Expect = 3e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||||||||| |||| || || || || || ||||| ||||| || ||| Sbjct 445746 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445687 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | ||| |||||||| ||||| || || || || ||||||||| Sbjct 445686 GACACTATCGATAATGTGAAATCTAAAATTCAGGATAAAGAGGGTATCCCGCCTGATCAA 445627 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || |||||| | || || ||||| ||||| || |||||| || | ||||| || Sbjct 445626 CAGAGATTGATTTTCGCTGGTAAGCAACTCGAAGACGGCAGAACTCTGTCTGATTACAAC 445567 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | ||| | || | ||| ||||||| Sbjct 445566 ATTCAGAAAGAGTCTACCTTGCACCTGGTCCTGAGATTGAGAGG 445523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718222802756