Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 237 2e-57 seq4 91.5 2e-13 >seq2 Length=1516309 Score = 237 bits (262), Expect = 2e-57 Identities = 1074/1681 (64%), Gaps = 45/1681 (3%) Strand=Plus/Plus Query 109501 TTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACAC 109560 ||||||||||| ||||| |||||| | || | || |||||||||||||| || | Sbjct 916221 TTCATCGACTGCGACTGGTCGATGTACGCGCCTCTGTCGGCCGCCATGTCGATAATGCTT 916280 Query 109561 TTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACG 109620 || || ||| |||||||| || ||||| | ||| | || | || | | Sbjct 916281 TTCTGCGGAATCTCCCAGACGGTGCGGTACAGGTCCTTCAACTCCTGTGGCACATTTGGC 916340 Query 109621 ATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATC---TCTTTCGACCAG 109677 | ||| || || ||||| |||| | |||| || ||||||| || ||| || | Sbjct 916341 AAGTTCTGGATCGAGCCGTTGTCCTTGATGATGAAATTCTTCATCGAGTCGTTCCACAAT 916400 Query 109678 AGACCGACCTTTTTGAGATCG-TCAACAAGATGCTTGTTGACCACGACAAATTCACCAGC 109736 || | || || || ||| |||| | | |||||| | || |||||||| Sbjct 916401 ---CCAAGGTTAACAAGGTCCCTCAGCAAG-TACGGGTTGACGATCTGGAACTCACCAGC 916456 Query 109737 AAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAG 109796 ||| | || | ||||||||| | ||||| || ||||||||||| || | || | Sbjct 916457 AAGAACTCTTCTGGAGTAGATGTTGGAGGTGTAAGGCTCGAAACACTCGTTATATCCCAA 916516 Query 109797 GATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTT 109856 || || | || || || || ||||| ||||||| | || |||| ||| || | Sbjct 916517 AATCTGCGATGTCGACGCGGTTGGCATAGGAGCCACCAAGAGCGAATTTCTGAGTCCATC 916576 Query 109857 CGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACC 109916 | ||| | || | | | |||||| || | || | | || || || Sbjct 916577 CTTCTGGATACGGGCCTTGAGCGAGTCCCAGTCCCACAGATCGGTTGGCTT---CTTGCC 916633 Query 109917 ATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTA 109976 ||| | || || | | ||||| | || || || |||| || ||||||| Sbjct 916634 ---CCAAAGGTCGAACTGCAAAATACCCTGCGACGCCGGCGATCCCTCAAAGGTCTCGTA 916690 Query 109977 CGACCCCTCAACCT--CGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTC 110034 || || ||| |||||| ||||| || ||||| | ||| | || || || ||| Sbjct 916691 TTTGCCATC--CCTAACGGCCAGCTCGGCAGAGGCCTCCAAAGCCCCGTGGTAGATGGTC 916748 Query 110035 TCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGA 110094 || ||||| || |||| | | |||| |||| || || || | | Sbjct 916749 TCGAAAATCTGGATGTTCAGCTCTCTGGCCTCTGGTGAGTCAAAAGGCAGTCTCAGCTGC 916808 Query 110095 ATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGC-GATGCTTCATGTTAGA 110153 || ||||| || || || ||||| ||||| | |||| || | | ||| |||||| || Sbjct 916809 ATGAACACGTCGGCCAGGCCCTGGACACCCACGGCAATCGGCCTGTTGCG-CATGTTGGA 916867 Query 110154 GCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGT 110213 || || | || || ||| |||| | |||||||| | ||||| ||||| || Sbjct 916868 TGTTCTTGCCTCTGGAACAGGATAATAGTTTCTGTCGATGATCTTGTTGAGGTTCTTAGT 916927 Query 110214 CACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAAC-----GTTTTCGTCTCCTTA 110268 ||| ||| ||||| | || || || ||| | | | || | | | ||| | | Sbjct 916928 GACAACCTTGGTGATCTGGTGCAGCTTTTCGAAGTTGTACCAGCTGGTATTGTCGTCGGA 916987 Query 110269 TTGA-CATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTC 110327 | | | | || || || || ||||| | ||| ||||| | ||| ||| Sbjct 916988 CTCAACGAAGGCTGGAAGGGCGATCGACGCCAAATTACACACGGCCACCTCCTCTGGAGA 917047 Query 110328 GGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTG 110387 | ||| || | |||||| ||||| || || ||| |||| ||| | ||||||||| Sbjct 917048 TGAGTACTCGACAATTTCGCAGCACAAATTAGACGACTTGATGATACCAAGGTTCTTCTG 917107 Query 110388 ATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTG 110447 || | ||||||||||| || ||||| || |||||| |||| || || ||||||||||| Sbjct 917108 GTTGGTCTTGGAGTTGCAGGCGTCCTTGTACAGCATGAATGGCGTGCCTGTTTCCGTCTG 917167 Query 110448 TGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTT--GCGTTAGCGAGACC 110504 | || | |||||| | ||| | | || | | | | || || |||| || || Sbjct 917168 GGCCTCCAAAATGGCGTACCACAGCTTCTGTGCCTTG-ACCGTCTGGCGTCCACGG--CC 917224 Query 110505 TTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACC 110564 ||||| ||||| ||||||| | |||| || || | |||||||| || ||||| || Sbjct 917225 TTCCTTTTCGTATCTGGTGTAGAGCTCCTTGAACTCGTCGCCGTACACGTCGGAAAGCCC 917284 Query 110565 CTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAA 110624 |||| | || |||| || | ||| | | || ||| || |||| |||||| Sbjct 917285 TGGAGCCTCGGAAGGCGAGAACAGCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAA 917344 Query 110625 CAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC-GGCAACGAGCCTCTTCATCACCTT 110683 |||||| |||||||||| ||| | ||| ||||| | ||| || | || || | ||| | Sbjct 917345 CAGGTCTGGAATCCACAGCGCAGGGAACAGGTCTCTGGCTCTGATC-TCCTCCTTACCAT 917403 Query 110684 GGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAG 110743 |||| || | || | |||||| | ||||||||||||||||| || | || | || Sbjct 917404 GGTTCTTCCGGATGTCGATAAAGTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAG 917463 Query 110744 CGATGGATCCCTTACGACGA------CCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797 | | | || | | || || |||||| || || | || ||| |||| Sbjct 917464 CAAACGCGCC---AGGCCGCTTGTTGCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGA 917520 Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACT 110857 | || || | ||| ||||| || || | ||| || || || || || ||| Sbjct 917521 ACACTCTCACCATTGGAATGATGCCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACC 917580 Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917 ||| | ||||| ||| || |||| |||||| || || || ||| || | | Sbjct 917581 CGGTGGATCTAATGTTGTGAATGTGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAG 917640 Query 110918 CACAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGA 110976 |||| ||| |||| || |||| || || || || || || |||| |||||| | Sbjct 917641 CACAGGTCT-TGAGGGTGTCATAGATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAG 917699 Query 110977 AAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGA 111036 || || ||||||||||| ||| |||| || || ||||| || || || || | ||| || Sbjct 917700 AAACAGGAAGACATCTGCGGATGAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGG 917759 Query 111037 ATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCG 111096 |||| | ||| |||||| |||||| || |||| || ||| | || | || Sbjct 917760 GTGAAGAATTTTTGCGACATCAGGTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCA 917819 Query 111097 TGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCA 111156 || ||||||||||| || ||||||| ||| | || || | ||| | ||||||||| Sbjct 917820 TGGATACCAATGGCCACACGCATGACCATGTGCTGGGGTCTCTCGGCGACTTTTCCATCA 917879 Query 111157 A 111157 | Sbjct 917880 A 917880 >seq4 Length=1302532 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/184 (73%), Gaps = 8/184 (4%) Strand=Plus/Plus Query 158479 TATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTAT--CAACGTTGGTG 158536 || || || || || |||||||| || | || || || || | || |||| |||| Sbjct 149020 TACGGACGCGTTGCTCCTCGTTCTGGACTTGCAGTCAAACATGGGATTTCAACA--GGTG 149077 Query 158537 CGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCA-TGGA 158595 | || ||||| ||| |||| ||| ||||||||| ||||||||||| ||||| || | | Sbjct 149078 CCGGAGTCATTGATGCTGACTATCGTGGAGAAGTGAAAGTCGTTCTTTTCAACCACTCCA 149137 Query 158596 GACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGT--TCTAGAACGTT 158653 | || |||||||| | || | ||||| ||||| ||||||||| | || |||| || Sbjct 149138 G-TAAAGACTTTGAAATCAACGAAGGTGACCGCATTGCACAGCTTATACTCGAGAAAATT 149196 Query 158654 GTGA 158657 |||| Sbjct 149197 GTGA 149200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975948464600