Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2 300 2e-76 seq4 100 3e-16 >seq2 Length=1516309 Score = 300 bits (332), Expect = 2e-76 Identities = 1134/1756 (65%), Gaps = 41/1756 (2%) Strand=Plus/Plus Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGC 105640 |||| | || ||| |||||||| |||||||||||||||| ||||| | || | ||| Sbjct 916119 GCCTGGGTTCTGAGGTAGTACATGCCGGTCTTGAGTCCTTTCTTCCAGCCATAGAAGTGC 916178 Query 105641 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCAT--ACTTTGACTCT 105698 || || | | |||| ||| ||||| | | | | | |||||| ||| |||| Sbjct 916179 ATCGACGTCAACTTGCCCATGGTTGGGTTCTTGAGGTGGATATTCATCGACTGCGACT-- 916236 Query 105699 GGTCAATGAA-GCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCC 105757 |||| ||| | ||| | || | |||||||| || || | ||| | || ||| Sbjct 916237 GGTCGATGTACGCGCCTCTGTCG-GCCGCCATGTCGATAATGCTTTTCTGCGGAATCTCC 916295 Query 105758 CACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAA 105817 || || |||||||| || | ||| | || | ||| | || || | || || || || Sbjct 916296 CAGACGGTGCGGTACAGGTCCTTCAACTCCTGTGGCACATTTGGCAAGTTCTGGATCGAG 916355 Query 105818 CCCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGA 105877 || |||||| |||| || |||||| | | ||| | |||| || || Sbjct 916356 CCGTTGTCCTTGATGATGAAATTCTTCATCGAGTCGTTCCACAATCCAAGGTTAACAAGG 916415 Query 105878 TCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAG 105937 || | | | | | |||||| ||| ||||| || || || |||||| ||| Sbjct 916416 TCCCTCAGCAAGTACGGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAG 916475 Query 105938 ATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCT 105997 ||||| | ||||| || || || || || |||| ||||| || || | || || || Sbjct 916476 ATGTTGGAGGTGTAAGGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCG 916535 Query 105998 GTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTG 106057 |||||||| || |||| ||| || || | || || | | || ||| || ||||| Sbjct 916536 GTTGGCATAGGAGCCACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTG 916595 Query 106058 AGAACATCCCAGTCGTAGTTGAGCTTGGTTT-CACCTTCCCACATA--TCAAATTGAAGC 106114 || |||||||| | || | |||| | ||| || || | || || || | Sbjct 916596 AGCGAGTCCCAGTCCCAC---AGATCGGTTGGCTTCTTGCCCCAAAGGTCGAACTGCAAA 916652 Query 106115 ACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAAT 106174 | || || |||| || || |||||||| ||||| || || | | |||| Sbjct 916653 ATACCCTGCGACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATCCCTAACGGCCAGC 916712 Query 106175 TCA-CAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 106233 || ||| ||||||| | |||| || ||||| || || || | |||| ||| Sbjct 916713 TCGGCAGAG-GCCTCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTC 916771 Query 106234 CTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTT 106292 |||| || ||| ||||| | | || || | || || || || || || || | Sbjct 916772 TCTGGCCTCTGGTGAGTCAAAAG-GCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCT 916830 Query 106293 GAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGA 106351 | ||||||| |||| || |||| ||||| || || ||| || ||| ||| ||| Sbjct 916831 GGACACCCACGGCAATCGGCCTGTTGCGCATGTTGGATGTTCTTGCC-TCTGGAACAGGA 916889 Query 106352 TAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGA 106411 ||| | |||||||| |||| ||| || || || || |||| ||| ||||| | || Sbjct 916890 TAATAGTTTCTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGC 916949 Query 106412 AGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG------ACATACTTTGGAAGGGCG 106465 || ||||| | | | || || | || | | || | |||||||||| Sbjct 916950 AGCTTTTCGAAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCG 917009 Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525 || || |||||||| || || ||| ||| || | || |||||| | |||||| Sbjct 917010 ATCGACGCCAAATTACACACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAG 917069 Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585 ||||| || || ||| || | || | ||||| ||||| |||| |||||| || Sbjct 917070 CACAAATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCG 917129 Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC 106645 |||||||| |||||| | ||||| || || |||||||| | || | ||| || | |||| Sbjct 917130 TCCTTGTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCAC 917189 Query 106646 A-CATCGGCGGCTGGTAC-AATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGA 106703 | | || | | || | | |||||| | || || ||| ||||| | ||||||| Sbjct 917190 AGCTTCTGTGCCTTGACCGTCTGGCGT--CCACGGCCTTCCTTTTCGTATCTGGTGTAGA 917247 Query 106704 GGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAA 106763 | | | ||||| || || | ||||||| || ||||| |||| | || |||| | Sbjct 917248 GCTCCTTGAACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACA 917307 Query 106764 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATG 106823 | | ||| | | | || ||| || | || |||||| ||||||||||||||||| | | Sbjct 917308 GCGTCCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAG 917367 Query 106824 AAAAGAGATCTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAAC 106882 || || ||||| | | || ||| || | ||| ||||| || | || | || Sbjct 917368 GGAACAGGTCTCTGGCTCTGA-TCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAG 917426 Query 106883 TCCATGATATCCGCGTGCCATGGCTCA------AGATAGACTGCGATAGATCCCTT-TCG 106935 || | ||||||| ||||||||||||| ||| | ||| || | ||| | | Sbjct 917427 TCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTG 917486 Query 106936 ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 106995 | ||| || | || || | || ||| ||| || || | | ||||||||| || Sbjct 917487 CCTCCC----TGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGAT 917542 Query 106996 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 107055 || | || || || || || || ||| ||| ||| | | || || Sbjct 917543 GCCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAAT 917602 Query 107056 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 107115 ||||| ||||| || ||||| ||| ||||| | ||||| | | || || |||| Sbjct 917603 GTGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATA 917662 Query 107116 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 107175 ||| |||| ||| ||||| ||||| |||| | | ||| || ||||||||||| Sbjct 917663 GATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATG 917722 Query 107176 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTT 107235 || ||||| ||||| || || ||||| | ||||| |||| | ||| |||||| Sbjct 917723 AGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAG 917782 Query 107236 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 || ||| ||||| | ||| |||||| || || ||||| || |||||||||||||| Sbjct 917783 GTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCAT 917842 Query 107296 AAACATGTATTGGGGT 107311 | ||||| |||||| Sbjct 917843 GACCATGTGCTGGGGT 917858 >seq4 Length=1302532 Score = 100 bits (110), Expect = 3e-16 Identities = 328/501 (65%), Gaps = 8/501 (2%) Strand=Plus/Plus Query 116995 ACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAAT 117054 |||| |||||| |||||||||||||| || |||| ||||| ||||| ||||| || Sbjct 919797 ACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGCAAGAGAGATGTTCTCCATGAAGTCGAAC 919856 Query 117055 GGATTCTTCGCGTTCCAAATGGGTG--GCACCCCAACTTGTTTGAGGAGACGATCCGACA 117112 || || | ||||| | || | ||| |||| | || || || || | | Sbjct 919857 GGGTTTGTGGCGTTGTAG-TGCTTCTTGCAGCCCAGAGA-TAAAAGCAGCCGGTCAGCAA 919914 Query 117113 CATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATT-ACATGGGAGT 117171 || |||| | ||||| | ||||| | |||||||||| | || || ||| || || Sbjct 919915 CAAACTCCACGTACTGGCACATCAGGTTGCAGTTCATACCCAGCAGGTTGACA-GGCAGG 919973 Query 117172 GCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGATAGTT 117231 ||||| || | | | || || ||||| || ||||| | | ||| | | | | Sbjct 919974 GCGTCGGTGAAGTATCTCTTTTCGATCTCGACGGCCTCGGTGATGATCTTGAGCACGATG 920033 Query 117232 TCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCTGGTGGAGA 117291 ||| | | || | || | | ||||||| |||||| || || ||| Sbjct 920034 TCGCTGTTTGGGGTGTTGTTGAGGTGCGAGAAGAGCAGACAGGCAAAGTCGGTATGCAGA 920093 Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 ||||| |||| | | || | || || |||||| || || ||||| || || | |||| Sbjct 920094 CCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACCAGGCATCAGTCCTCTCTTC 920153 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 || | ||| | || | | || || || |||||||| ||||||||||| |||||| Sbjct 920154 TTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAAATACCCTCCACGGCAGCAAAC 920213 Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTGCCCATTT 117470 |||| || | |||||| || || | | | || || | |||| |||| ||||||| Sbjct 920214 GCAACGAGTCTCTCGGC-AAACAGGGCTTCCTCGTCGTTGATCCATCTCATGGCCCATTC 920272 Query 117471 CGCCTTCTTCTCAATACATGG 117491 ||||||| || |||||||| Sbjct 920273 GGCCTTCTCCTTGATACATGG 920293 Score = 95.1 bits (104), Expect = 1e-14 Identities = 124/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 155043 GTATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGC 155102 ||| || || ||||| || || || || || || || || ||||| ||| | ||||| Sbjct 149019 GTACGGACGCGTTGCTCCTCGTTCTGGACTTGCAGTCAAACATGGGATTTCAACAGGTGC 149078 Query 155103 GGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGA 155162 || || |||||| | |||||| || ||||| ||||||||||| ||||| ||| Sbjct 149079 CGGAGTCATTGATGCTGACTATCGTGGAGAAGTGAAAGTCGTTCTTTTCAACCACTCCAG 149138 Query 155163 CAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAG 155214 ||||||||||| | || |||| || ||||| ||||| ||| | || ||| Sbjct 149139 TAAAGACTTTGAAATCAACGAAGGTGACCGCATTGCACAGCTTATACTCGAG 149190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980748376680