Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 >seq2 Length=1516309 Score = 107 bits (118), Expect = 2e-18 Identities = 170/240 (71%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 154871 TATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATA-T 154929 ||||||||| ||||||||||| ||| ||||| | || || ||| || || ||| | Sbjct 347804 TATTATGATCACATACCCATCGACATATGGTATGTTCGAGCCTACAATCAGG--GATGCT 347861 Query 154930 GTAAGA-TCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCA 154988 || | ||||||||| |||| || ||||| ||||||||||| || || | ||||| Sbjct 347862 GTCCGGCTCGTTCATGCTCATGGAGGCCAGGTTTATCTTGATGGCGCGAACATGAATGCT 347921 Query 154989 CAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACAT 155048 || || ||| | || || | || | || || || || |||||| | || || ||| Sbjct 347922 CAAGTGGGATTGACATCCCCGGGAGACTTGGGAGCCGACGTCTGTCATTTGAATTTGCAT 347981 Query 155049 AAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCA 155108 || || ||| ||| || ||||| || || ||||| || || || ||||| |||| ||| Sbjct 347982 AAGACTTTCGCTATACCTCATGGTGGGGGTGGTCCAGGTGTTGGACCTATTTGTGTTGCA 348041 Score = 104 bits (114), Expect = 3e-17 Identities = 180/260 (69%), Gaps = 4/260 (2%) Strand=Plus/Plus Query 153767 GCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAAC 153826 |||||| ||||| |||||||||| | |||||| |||||||| ||||| ||||| || Sbjct 346682 GCAAAGATTTGGCGTTCCTATGGGTTTTGGAGGCCCTCATGCGGCATTTTTTGCTGTCAC 346741 Query 153827 AGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG--TCAGTCAGTAGATAGTGAA 153884 || || | | || ||||| || || ||| | || || ||| || ||| || Sbjct 346742 TGAAAAATTGCAAAGGAAGATTCCAGGAAGACTAGTGGGCGTCA--CAAAAGACAGGCTC 346799 Query 153885 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAA 153944 |||||| | || | || ||||| || ||| | |||||||| |||| ||||| || Sbjct 346800 GGTAATCATGCCCTTCGTTTGGCACTTCAAACTCGTGAGCAGCACATCAAAAGAGAAAAG 346859 Query 153945 GCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCA 154004 || || ||||||||||| |||||||| || || || || || | | ||| | Sbjct 346860 GCTACTTCAAACATCTGCACTGCTCAGGCTCTACTCGCCAACATTGCAGCCAACTACGTG 346919 Query 154005 GCATATCATGGTGCAGATGG 154024 | ||||||||| | ||||| Sbjct 346920 GTTTATCATGGTTCCGATGG 346939 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 153243 GTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAA 153302 || || ||||| || | ||||| || || |||||||||||| |||||||| ||||| Sbjct 346152 GTGATCCAGCGGAATCTGCTTGAAAACCCCGCTTGGTACACATCCTACACTCCTTATCAG 346211 Query 153303 GCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAA 153362 | ||| | || || ||| | | || | | || ||||| || || | | | || Sbjct 346212 CCCGAGGTTTCGCAAGGACGGCTCGAGAGTCTTTTAAATTATCAGACCATTGTTTCGGAC 346271 Query 153363 CTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAA 153422 || || ||| | ||| | |||||| ||||||| | ||||| || |||||||| || ||| Sbjct 346272 CTCACTGGACTTCCAGTGGCAAACTCATCTCTTCTTGATGAGGCTACTGCAGCTGCGGAA 346331 Query 153423 GCAATG 153428 || ||| Sbjct 346332 GCCATG 346337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212749318880