Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 2e-18
>seq2
Length=1516309
Score = 107 bits (118), Expect = 2e-18
Identities = 170/240 (71%), Gaps = 4/240 (2%)
Strand=Plus/Plus
Query 154871 TATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATA-T 154929
||||||||| ||||||||||| ||| ||||| | || || ||| || || ||| |
Sbjct 347804 TATTATGATCACATACCCATCGACATATGGTATGTTCGAGCCTACAATCAGG--GATGCT 347861
Query 154930 GTAAGA-TCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCA 154988
|| | ||||||||| |||| || ||||| ||||||||||| || || | |||||
Sbjct 347862 GTCCGGCTCGTTCATGCTCATGGAGGCCAGGTTTATCTTGATGGCGCGAACATGAATGCT 347921
Query 154989 CAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACAT 155048
|| || ||| | || || | || | || || || || |||||| | || || |||
Sbjct 347922 CAAGTGGGATTGACATCCCCGGGAGACTTGGGAGCCGACGTCTGTCATTTGAATTTGCAT 347981
Query 155049 AAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCA 155108
|| || ||| ||| || ||||| || || ||||| || || || ||||| |||| |||
Sbjct 347982 AAGACTTTCGCTATACCTCATGGTGGGGGTGGTCCAGGTGTTGGACCTATTTGTGTTGCA 348041
Score = 104 bits (114), Expect = 3e-17
Identities = 180/260 (69%), Gaps = 4/260 (2%)
Strand=Plus/Plus
Query 153767 GCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAAC 153826
|||||| ||||| |||||||||| | |||||| |||||||| ||||| ||||| ||
Sbjct 346682 GCAAAGATTTGGCGTTCCTATGGGTTTTGGAGGCCCTCATGCGGCATTTTTTGCTGTCAC 346741
Query 153827 AGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG--TCAGTCAGTAGATAGTGAA 153884
|| || | | || ||||| || || ||| | || || ||| || ||| ||
Sbjct 346742 TGAAAAATTGCAAAGGAAGATTCCAGGAAGACTAGTGGGCGTCA--CAAAAGACAGGCTC 346799
Query 153885 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAA 153944
|||||| | || | || ||||| || ||| | |||||||| |||| ||||| ||
Sbjct 346800 GGTAATCATGCCCTTCGTTTGGCACTTCAAACTCGTGAGCAGCACATCAAAAGAGAAAAG 346859
Query 153945 GCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCA 154004
|| || ||||||||||| |||||||| || || || || || | | ||| |
Sbjct 346860 GCTACTTCAAACATCTGCACTGCTCAGGCTCTACTCGCCAACATTGCAGCCAACTACGTG 346919
Query 154005 GCATATCATGGTGCAGATGG 154024
| ||||||||| | |||||
Sbjct 346920 GTTTATCATGGTTCCGATGG 346939
Score = 87.8 bits (96), Expect = 2e-12
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 153243 GTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAA 153302
|| || ||||| || | ||||| || || |||||||||||| |||||||| |||||
Sbjct 346152 GTGATCCAGCGGAATCTGCTTGAAAACCCCGCTTGGTACACATCCTACACTCCTTATCAG 346211
Query 153303 GCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAA 153362
| ||| | || || ||| | | || | | || ||||| || || | | | ||
Sbjct 346212 CCCGAGGTTTCGCAAGGACGGCTCGAGAGTCTTTTAAATTATCAGACCATTGTTTCGGAC 346271
Query 153363 CTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAA 153422
|| || ||| | ||| | |||||| ||||||| | ||||| || |||||||| || |||
Sbjct 346272 CTCACTGGACTTCCAGTGGCAAACTCATCTCTTCTTGATGAGGCTACTGCAGCTGCGGAA 346331
Query 153423 GCAATG 153428
|| |||
Sbjct 346332 GCCATG 346337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579212749318880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |