Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 >seq2 Length=1516309 Score = 107 bits (118), Expect = 2e-18 Identities = 170/240 (71%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 159546 TATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATA-T 159604 ||||||||| ||||| ||||| ||| ||||| | || || | | ||||| ||| | Sbjct 347804 TATTATGATCACATACCCATCGACATATGGTATGTTCGAGCCTACAATCAGG--GATGCT 347861 Query 159605 GTAAGATT-GTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCA 159663 || | | ||||||| |||| || ||||| ||||||||||| || || | ||||| Sbjct 347862 GTCCGGCTCGTTCATGCTCATGGAGGCCAGGTTTATCTTGATGGCGCGAACATGAATGCT 347921 Query 159664 CAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACAT 159723 || || || | || || | |||| || || || || |||||| | || || ||| Sbjct 347922 CAAGTGGGATTGACATCCCCGGGAGACTTGGGAGCCGACGTCTGTCATTTGAATTTGCAT 347981 Query 159724 AAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCA 159783 ||||| ||| ||| || ||||| || || ||||| || || || |||||| |||| ||| Sbjct 347982 AAGACTTTCGCTATACCTCATGGTGGGGGTGGTCCAGGTGTTGGACCTATTTGTGTTGCA 348041 Score = 95.1 bits (104), Expect = 1e-14 Identities = 178/260 (68%), Gaps = 4/260 (2%) Strand=Plus/Plus Query 158442 GCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAAC 158501 |||||| ||||| |||||||||| | ||||| |||||||| ||||| ||||| || Sbjct 346682 GCAAAGATTTGGCGTTCCTATGGGTTTTGGAGGCCCTCATGCGGCATTTTTTGCTGTCAC 346741 Query 158502 AGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG--TCAGTCAGTAGATAGCGAA 158559 || || | | || ||||| || || ||| | || || ||| || ||| || Sbjct 346742 TGAAAAATTGCAAAGGAAGATTCCAGGAAGACTAGTGGGCGTCA--CAAAAGACAGGCTC 346799 Query 158560 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAA 158619 |||||| | || | || ||||| || ||| | |||||||| |||| |||||| || Sbjct 346800 GGTAATCATGCCCTTCGTTTGGCACTTCAAACTCGTGAGCAGCACATCAAAAGAGAAAAG 346859 Query 158620 GCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCA 158679 || || ||||||||||| || || || || || || || || | | ||| | Sbjct 346860 GCTACTTCAAACATCTGCACTGCTCAGGCTCTACTCGCCAACATTGCAGCCAACTACGTG 346919 Query 158680 GCATATCATGGTGCAGATGG 158699 | ||||||||| | ||||| Sbjct 346920 GTTTATCATGGTTCCGATGG 346939 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 157918 GTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAA 157977 || || ||||| || | ||||| || || |||||||||||| |||||||| ||||| Sbjct 346152 GTGATCCAGCGGAATCTGCTTGAAAACCCCGCTTGGTACACATCCTACACTCCTTATCAG 346211 Query 157978 GCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAA 158037 | ||| | || || ||| | | || | | || ||||| || || | | | || Sbjct 346212 CCCGAGGTTTCGCAAGGACGGCTCGAGAGTCTTTTAAATTATCAGACCATTGTTTCGGAC 346271 Query 158038 CTCACAGGACTACCGATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAA 158097 ||||| ||||| || | |||||| ||||||| | ||||| || |||||||| || ||| Sbjct 346272 CTCACTGGACTTCCAGTGGCAAACTCATCTCTTCTTGATGAGGCTACTGCAGCTGCGGAA 346331 Query 158098 GCAATG 158103 || ||| Sbjct 346332 GCCATG 346337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051148545520