Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq7 165 7e-35 seq1 116 3e-20 >seq7 Length=988507 Score = 165 bits (182), Expect = 7e-35 Identities = 459/698 (66%), Gaps = 12/698 (2%) Strand=Plus/Minus Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATT 551966 || ||||| || || || || ||||| || ||||||| ||| |||| || || | Sbjct 313420 CTCAGAACCGCCTGTGAGAGGGCCAAGAGAACTCTTTCCTCTTCCGCTCAGACGTCTCTG 313361 Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTT 552026 || | || || | | ||||| ||||| | | || | || | || |||| ||| Sbjct 313360 GAGATCGACTCGCTGTACGAGGGTATTGACTTCTACACCTCGATCACCAGAGCCAGATTC 313301 Query 552027 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 ||||| | ||| || || || ||| || | || || || || | || | | Sbjct 313300 GAAGAGCTCTGTCAGGACCTGTTCAGATCTACCTTGGACCCTGTCGAGAAGGTGCTGAAG 313241 Query 552087 GATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146 ||| | ||| |||| || || |||| | || ||||||||||||||||| || || ||| Sbjct 313240 GATGCCAAGCTTGACAAGTCTCAAGTCAACGAGATTGTGCTTGTTGGTGGTTCCACCAGA 313181 Query 552147 ATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAA 552203 ||||| || | | ||| | | |||| | ||| || || || | ||| | Sbjct 313180 ATTCCAAAGGTCC---AAAAGCTCGTTTCTGACTTCTTCAACGGCAAGGAGCCAAAC--A 313126 Query 552204 AGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTT 552261 ||| | || |||||||||||||||||||| ||||| || | || || ||||| | Sbjct 313125 AGTCCATCAACCCAGATGAGGCTGTTGCCTACGGTGCTGCTGTGCAGGCTGCTATCTTGA 313066 Query 552262 CTGGACAAACTGA-TGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCT 552320 | || | ||| | || || || | | | || | || ||| |||| || ||| Sbjct 313065 CCGGTGACACTTCCTCCAAGACC-CAGGACCTGTTGCTGTTGGACGTTGCTCCACTCTCT 313007 Query 552321 CTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATT 552380 || ||| | || || | ||| ||| | ||||| || || ||| ||||| || || ||| Sbjct 313006 CTCGGTATCGAGACCGCTGGTGGTGTCATGACCAAGCTGATCCCAAGAAACACCACCATT 312947 Query 552381 CCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440 || || || ||| | || |||||||| || || || ||| | | ||| ||| Sbjct 312946 CCAACCAAGAAGTCTGAGATCTTCTCTACGTACTCCGACAACCAACCAGGTGTGTTGATT 312887 Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500 ||| ||| || || || ||| || || || || || ||||||| || | Sbjct 312886 CAAGTTTACGAGGGTGAGAGAGCCAGAACAAAGGACAACAACTTGCTTGGTAAGTTCGAG 312827 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 | |||||||| || ||||| | || || || |||||||| ||||||||||||||| Sbjct 312826 CTCTCTGGTATTCCACCAGCTCCAAGAGGTGTTCCTCAAATTGAGGTTACTTTCGATATC 312767 Query 552561 GATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 || ||||| ||||||||||||||| | ||| ||| || Sbjct 312766 GACGCCAACGGAATTTTGAATGTGTCCGCTGTTGAAAA 312729 Score = 129 bits (142), Expect = 5e-24 Identities = 366/549 (67%), Gaps = 20/549 (4%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTG-GTGTTTGGCAAAATGGTAAAGTTGA 550056 ||||| || ||||| || || ||| ||||||| | || || || | | ||| || Sbjct 314185 GGTATTGACTTAGGTACTACCTATTCGTGTGTTGCGCACTTTGCCAAC-GACAGAGTCGA 314127 Query 550057 AATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAAC 550116 ||||| |||||||| ||||||||||||||||||||||| | ||| | ||||| || || Sbjct 314126 GATTATCGCCAATGACCAAGGTAACAGAACTACTCCATCGTTCGTTGCCTTCACCGACAC 314067 Query 550117 TGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTA 550175 ||| | ||| | | ||||| || || || | || || | || || |||| ||| Sbjct 314066 TGAGAGATTGA-TCGGTGACGCCGCTAAGAACCAGGCTGCCATGAACCCAGCCAACACTG 314008 Query 550176 TTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATA 550235 | || || || || | | || || |||| ||| | || | ||||||| |||| Sbjct 314007 TGTTCGACGCCAAGAGACTGATCGGCAGAAAGTTTGACGACCCAGAGGTTCAGGGTGATA 313948 Query 550236 TGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-CTACT 550294 | ||||| | || ||| | |||| | || || || | || | | | | | Sbjct 313947 TCAAGCACTTCCCATTCAAGGTTGTCGACAAGAGCGGCAAGCCACAGATCCAGGTCGAAT 313888 Query 550295 CATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTATGGTTTTAAT 550350 | |||| | | | ||| ||| | |||||| |||| || |||||||| || | Sbjct 313887 --TCAAGGGTGAG---ACCAAGGTGTTTACTCCAGAAGAAATCTCGTCTATGGTGTTGAC 313833 Query 550351 GAAAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAA--GTTACGGATGCAGTAAT 550407 || ||||| | || ||| ||| |||| | || || | |||| ||| || || || Sbjct 313832 CAAGATGAAGGAGACCGCCGAGT-CTTTCCTCGG--AACCACCGTTAAGGACGCTGTTAT 313776 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 ||||| ||||| || || || || || ||| | ||||| || || ||||| || || Sbjct 313775 TACTGTTCCAGCTTACTTCAACGATTCCCAAAGACAAGCCACCAAGGATGCCGGTTTGAT 313716 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 |||||| |||||||| | | || || || || ||||||||||| || |||| || || Sbjct 313715 TGCTGGTCTTAATGTCATGAGAATCATTAACGAGCCTACTGCTGCCGCTATTGCCTACGG 313656 Query 550528 ACTTGATAA 550536 || || || Sbjct 313655 TCTGGACAA 313647 Score = 123 bits (136), Expect = 2e-22 Identities = 361/550 (66%), Gaps = 16/550 (3%) Strand=Plus/Minus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || || |||||| | || ||||||||| |||||||||||| | | ||| | |||| Sbjct 614173 ATTGGCATAGATCTTGGTACCACATATTCATGTGTTGGTGTTATGAAGGCTGGAAGAGTT 614114 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 ||||| ||| | ||||| |||||||| |||| || |||||||||||| | || || || Sbjct 614113 GAAATCATTCCTAATGACCAAGGTAATAGAATAACACCATCTTATGTTGCATTTACCGAG 614054 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTG-GT--AATCCTACCAAT 550171 |||| ||||| || ||||| || || ||||| | || || || || |||||| Sbjct 614053 GATGAAAGGTTAGTGGGGGATGCCGCCAAGAATCAA---ATTGCGTCAAACCCGACCAAT 613997 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 ||||||||||| ||| | || ||||| | ||| |||| ||||| | Sbjct 613996 ACTATTTTTGACATCAAAAGATTGATTGGGCACCGGTTTGATGACAAAGTAATTCAGAAA 613937 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTT---TCTGGAAAACCTTATATTGAA 550288 || || || |||| ||| | | | ||||| | | ||| | ||| | | || Sbjct 613936 GAGATCAAACATTTGCCAT---ACAAGGTTAAGGATCAAGATGGTAGACCGGTTGTGGAG 613880 Query 550289 GCTACTCATGAAGGATCTGTTAAACAATTTTCAC--CAGAACAAATTTCATCTATGGTTT 550346 || | | | || | || | ||||| | ||| ||||||| | ||| ||| Sbjct 613879 GCAAAGGTTAACGGGGAACTCAA--GACCTTCACCGCGGAAGAAATTTCTGCCATGATTT 613822 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 | ||||||||||| | || | | | || | |||| || | || || Sbjct 613821 TGGGCAAAATGAAACAGATTGCAGAAGACTACCTAGGAAAGAAAGTGACCCACGCTGTCG 613762 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | ||||| |||||||| || ||||| | ||| | ||||| ||||| ||||| ||| | Sbjct 613761 TTACTGTCCCAGCATACTTCAATGATGCGCAAAGACAAGCAACTAAGGATGCAGGAACGA 613702 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 ||||||| | | ||||| | ||| | || || || || || || || ||||||||| Sbjct 613701 TTGCTGGTTTGGAGGTTCTGAGAATTGTTAACGAGCCAACCGCAGCAGCTATTGCATATG 613642 Query 550527 GACTTGATAA 550536 | | ||||| Sbjct 613641 GTTTGGATAA 613632 >seq1 Length=1541475 Score = 116 bits (128), Expect = 3e-20 Identities = 151/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 563271 ATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTG 563330 |||||| ||| ||| || ||| |||||||| | |||||||| ||||| || || Sbjct 445087 ATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCTAGCTG 445146 Query 563331 TTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTT 563390 || || |||||||| ||||||||||| ||||| || |||||||| ||||| |||||||| Sbjct 445147 CTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTATCCTGAATTTT 445206 Query 563391 TTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAG 563449 || || || || || |||| | || | | || || || | || || |||| Sbjct 445207 GGACTTGACGTTATCGATAGTGTCAGAG-GACTCAACCTCAAGGGTGATGGTCTTTCCAG 445265 Query 563450 TAAGAGTTTTAACGAAAATTTGCATA 563475 | | ||||||||||||||||||||| Sbjct 445266 TCAAGGTTTTAACGAAAATTTGCATA 445291 Score = 114 bits (126), Expect = 1e-19 Identities = 138/185 (75%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||| |||||||| | |||||||| ||||| || || || || |||||||| ||||| Sbjct 445792 AATGTTGTAATCGGACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCT 445851 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||| |||||||| |||||||| |||||||||||||| || || || || || Sbjct 445852 TTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGT 445911 Query 563412 ATCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 |||| | || | | || || || | || || || || | |||||||||||||||| Sbjct 445912 GTCAGAG-GACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTT 445970 Query 563471 GCATA 563475 ||||| Sbjct 445971 GCATA 445975 Score = 114 bits (126), Expect = 1e-19 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 563284 TCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAA 563343 ||||| ||| |||||||| | |||||||| ||||| || || || || |||||| Sbjct 446012 TCTTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAA 446071 Query 563344 ATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCC 563403 || ||||||||||| |||||||| |||||||| ||||||||||| || ||| || Sbjct 446072 ATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGAATCTTCGATTTGACATTA 446131 Query 563404 TCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAAC 563462 || || || |||| | ||| || | ||| | |||||| || || | ||| ||||| Sbjct 446132 TCGATAGTGTCAGAAGATTCTAC-CTCTAAAGTGATAGTTTTGCCGGTCAAAGTCTTAAC 446190 Query 563463 GAAAATTTGCAT 563474 |||||| ||||| Sbjct 446191 GAAAATCTGCAT 446202 Score = 104 bits (114), Expect = 2e-16 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || || || || | |||| ||||| ||| |||||||||| |||||||| ||| Sbjct 445535 AGGACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCAGACAGAGTTCTGCCGTCT 445594 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 || ||||| || || || ||||| | ||| || |||||||| || || || |||||||| Sbjct 445595 TCGAGTTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGCGGGATACCCTCTTTATCC 445654 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCGAGAGTAACAGT 563441 |||||||| ||| || || || || |||| | || | | || || || | || Sbjct 445655 TGAATTTTAGATTTCACATTATCGATAGTGTCAGAG-GACTCAACCTCAAGGGTGATGGT 445713 Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || || | ||||||||||||||||||||| Sbjct 445714 CTTTCCGGTCAAGGTTTTAACGAAAATTTGCATA 445747 Score = 102 bits (112), Expect = 7e-16 Identities = 135/185 (73%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||| || || || | || ||||| ||||| ||||| || || || ||||||||||| Sbjct 445336 AATGTTATAGTCGGATAACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCT 445395 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||| ||||| || |||||||| |||||||||||||| || || || || || Sbjct 445396 TTGCTGGTCAGGGGGGATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGT 445455 Query 563412 ATCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 |||| | || | | || || || | || || || || | |||||||||||||||| Sbjct 445456 GTCAGAG-GACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTT 445514 Query 563471 GCATA 563475 ||||| Sbjct 445515 GCATA 445519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029295629808430