Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq7 165 7e-35
seq1 116 3e-20
>seq7
Length=988507
Score = 165 bits (182), Expect = 7e-35
Identities = 459/698 (66%), Gaps = 12/698 (2%)
Strand=Plus/Minus
Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATT 551966
|| ||||| || || || || ||||| || ||||||| ||| |||| || || |
Sbjct 313420 CTCAGAACCGCCTGTGAGAGGGCCAAGAGAACTCTTTCCTCTTCCGCTCAGACGTCTCTG 313361
Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTT 552026
|| | || || | | ||||| ||||| | | || | || | || |||| |||
Sbjct 313360 GAGATCGACTCGCTGTACGAGGGTATTGACTTCTACACCTCGATCACCAGAGCCAGATTC 313301
Query 552027 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086
||||| | ||| || || || ||| || | || || || || | || | |
Sbjct 313300 GAAGAGCTCTGTCAGGACCTGTTCAGATCTACCTTGGACCCTGTCGAGAAGGTGCTGAAG 313241
Query 552087 GATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146
||| | ||| |||| || || |||| | || ||||||||||||||||| || || |||
Sbjct 313240 GATGCCAAGCTTGACAAGTCTCAAGTCAACGAGATTGTGCTTGTTGGTGGTTCCACCAGA 313181
Query 552147 ATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAA 552203
||||| || | | ||| | | |||| | ||| || || || | ||| |
Sbjct 313180 ATTCCAAAGGTCC---AAAAGCTCGTTTCTGACTTCTTCAACGGCAAGGAGCCAAAC--A 313126
Query 552204 AGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTT 552261
||| | || |||||||||||||||||||| ||||| || | || || ||||| |
Sbjct 313125 AGTCCATCAACCCAGATGAGGCTGTTGCCTACGGTGCTGCTGTGCAGGCTGCTATCTTGA 313066
Query 552262 CTGGACAAACTGA-TGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCT 552320
| || | ||| | || || || | | | || | || ||| |||| || |||
Sbjct 313065 CCGGTGACACTTCCTCCAAGACC-CAGGACCTGTTGCTGTTGGACGTTGCTCCACTCTCT 313007
Query 552321 CTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATT 552380
|| ||| | || || | ||| ||| | ||||| || || ||| ||||| || || |||
Sbjct 313006 CTCGGTATCGAGACCGCTGGTGGTGTCATGACCAAGCTGATCCCAAGAAACACCACCATT 312947
Query 552381 CCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440
|| || || ||| | || |||||||| || || || ||| | | ||| |||
Sbjct 312946 CCAACCAAGAAGTCTGAGATCTTCTCTACGTACTCCGACAACCAACCAGGTGTGTTGATT 312887
Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500
||| ||| || || || ||| || || || || || ||||||| || |
Sbjct 312886 CAAGTTTACGAGGGTGAGAGAGCCAGAACAAAGGACAACAACTTGCTTGGTAAGTTCGAG 312827
Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560
| |||||||| || ||||| | || || || |||||||| |||||||||||||||
Sbjct 312826 CTCTCTGGTATTCCACCAGCTCCAAGAGGTGTTCCTCAAATTGAGGTTACTTTCGATATC 312767
Query 552561 GATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598
|| ||||| ||||||||||||||| | ||| ||| ||
Sbjct 312766 GACGCCAACGGAATTTTGAATGTGTCCGCTGTTGAAAA 312729
Score = 129 bits (142), Expect = 5e-24
Identities = 366/549 (67%), Gaps = 20/549 (4%)
Strand=Plus/Minus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTG-GTGTTTGGCAAAATGGTAAAGTTGA 550056
||||| || ||||| || || ||| ||||||| | || || || | | ||| ||
Sbjct 314185 GGTATTGACTTAGGTACTACCTATTCGTGTGTTGCGCACTTTGCCAAC-GACAGAGTCGA 314127
Query 550057 AATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAAC 550116
||||| |||||||| ||||||||||||||||||||||| | ||| | ||||| || ||
Sbjct 314126 GATTATCGCCAATGACCAAGGTAACAGAACTACTCCATCGTTCGTTGCCTTCACCGACAC 314067
Query 550117 TGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTA 550175
||| | ||| | | ||||| || || || | || || | || || |||| |||
Sbjct 314066 TGAGAGATTGA-TCGGTGACGCCGCTAAGAACCAGGCTGCCATGAACCCAGCCAACACTG 314008
Query 550176 TTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATA 550235
| || || || || | | || || |||| ||| | || | ||||||| ||||
Sbjct 314007 TGTTCGACGCCAAGAGACTGATCGGCAGAAAGTTTGACGACCCAGAGGTTCAGGGTGATA 313948
Query 550236 TGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-CTACT 550294
| ||||| | || ||| | |||| | || || || | || | | | | |
Sbjct 313947 TCAAGCACTTCCCATTCAAGGTTGTCGACAAGAGCGGCAAGCCACAGATCCAGGTCGAAT 313888
Query 550295 CATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTATGGTTTTAAT 550350
| |||| | | | ||| ||| | |||||| |||| || |||||||| || |
Sbjct 313887 --TCAAGGGTGAG---ACCAAGGTGTTTACTCCAGAAGAAATCTCGTCTATGGTGTTGAC 313833
Query 550351 GAAAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAA--GTTACGGATGCAGTAAT 550407
|| ||||| | || ||| ||| |||| | || || | |||| ||| || || ||
Sbjct 313832 CAAGATGAAGGAGACCGCCGAGT-CTTTCCTCGG--AACCACCGTTAAGGACGCTGTTAT 313776
Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467
||||| ||||| || || || || || ||| | ||||| || || ||||| || ||
Sbjct 313775 TACTGTTCCAGCTTACTTCAACGATTCCCAAAGACAAGCCACCAAGGATGCCGGTTTGAT 313716
Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527
|||||| |||||||| | | || || || || ||||||||||| || |||| || ||
Sbjct 313715 TGCTGGTCTTAATGTCATGAGAATCATTAACGAGCCTACTGCTGCCGCTATTGCCTACGG 313656
Query 550528 ACTTGATAA 550536
|| || ||
Sbjct 313655 TCTGGACAA 313647
Score = 123 bits (136), Expect = 2e-22
Identities = 361/550 (66%), Gaps = 16/550 (3%)
Strand=Plus/Minus
Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054
|| || |||||| | || ||||||||| |||||||||||| | | ||| | ||||
Sbjct 614173 ATTGGCATAGATCTTGGTACCACATATTCATGTGTTGGTGTTATGAAGGCTGGAAGAGTT 614114
Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114
||||| ||| | ||||| |||||||| |||| || |||||||||||| | || || ||
Sbjct 614113 GAAATCATTCCTAATGACCAAGGTAATAGAATAACACCATCTTATGTTGCATTTACCGAG 614054
Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTG-GT--AATCCTACCAAT 550171
|||| ||||| || ||||| || || ||||| | || || || || ||||||
Sbjct 614053 GATGAAAGGTTAGTGGGGGATGCCGCCAAGAATCAA---ATTGCGTCAAACCCGACCAAT 613997
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231
||||||||||| ||| | || ||||| | ||| |||| ||||| |
Sbjct 613996 ACTATTTTTGACATCAAAAGATTGATTGGGCACCGGTTTGATGACAAAGTAATTCAGAAA 613937
Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTT---TCTGGAAAACCTTATATTGAA 550288
|| || || |||| ||| | | | ||||| | | ||| | ||| | | ||
Sbjct 613936 GAGATCAAACATTTGCCAT---ACAAGGTTAAGGATCAAGATGGTAGACCGGTTGTGGAG 613880
Query 550289 GCTACTCATGAAGGATCTGTTAAACAATTTTCAC--CAGAACAAATTTCATCTATGGTTT 550346
|| | | | || | || | ||||| | ||| ||||||| | ||| |||
Sbjct 613879 GCAAAGGTTAACGGGGAACTCAA--GACCTTCACCGCGGAAGAAATTTCTGCCATGATTT 613822
Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406
| ||||||||||| | || | | | || | |||| || | || ||
Sbjct 613821 TGGGCAAAATGAAACAGATTGCAGAAGACTACCTAGGAAAGAAAGTGACCCACGCTGTCG 613762
Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466
| ||||| |||||||| || ||||| | ||| | ||||| ||||| ||||| ||| |
Sbjct 613761 TTACTGTCCCAGCATACTTCAATGATGCGCAAAGACAAGCAACTAAGGATGCAGGAACGA 613702
Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526
||||||| | | ||||| | ||| | || || || || || || || |||||||||
Sbjct 613701 TTGCTGGTTTGGAGGTTCTGAGAATTGTTAACGAGCCAACCGCAGCAGCTATTGCATATG 613642
Query 550527 GACTTGATAA 550536
| | |||||
Sbjct 613641 GTTTGGATAA 613632
>seq1
Length=1541475
Score = 116 bits (128), Expect = 3e-20
Identities = 151/206 (73%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 563271 ATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTG 563330
|||||| ||| ||| || ||| |||||||| | |||||||| ||||| || ||
Sbjct 445087 ATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCTAGCTG 445146
Query 563331 TTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTT 563390
|| || |||||||| ||||||||||| ||||| || |||||||| ||||| ||||||||
Sbjct 445147 CTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTATCCTGAATTTT 445206
Query 563391 TTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAG 563449
|| || || || || |||| | || | | || || || | || || ||||
Sbjct 445207 GGACTTGACGTTATCGATAGTGTCAGAG-GACTCAACCTCAAGGGTGATGGTCTTTCCAG 445265
Query 563450 TAAGAGTTTTAACGAAAATTTGCATA 563475
| | |||||||||||||||||||||
Sbjct 445266 TCAAGGTTTTAACGAAAATTTGCATA 445291
Score = 114 bits (126), Expect = 1e-19
Identities = 138/185 (75%), Gaps = 2/185 (1%)
Strand=Plus/Plus
Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351
||| |||||||| | |||||||| ||||| || || || || |||||||| |||||
Sbjct 445792 AATGTTGTAATCGGACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCT 445851
Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411
|||||| |||||||| |||||||| |||||||||||||| || || || || ||
Sbjct 445852 TTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGT 445911
Query 563412 ATCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470
|||| | || | | || || || | || || || || | ||||||||||||||||
Sbjct 445912 GTCAGAG-GACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTT 445970
Query 563471 GCATA 563475
|||||
Sbjct 445971 GCATA 445975
Score = 114 bits (126), Expect = 1e-19
Identities = 142/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 563284 TCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAA 563343
||||| ||| |||||||| | |||||||| ||||| || || || || ||||||
Sbjct 446012 TCTTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAA 446071
Query 563344 ATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCC 563403
|| ||||||||||| |||||||| |||||||| ||||||||||| || ||| ||
Sbjct 446072 ATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGAATCTTCGATTTGACATTA 446131
Query 563404 TCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAAC 563462
|| || || |||| | ||| || | ||| | |||||| || || | ||| |||||
Sbjct 446132 TCGATAGTGTCAGAAGATTCTAC-CTCTAAAGTGATAGTTTTGCCGGTCAAAGTCTTAAC 446190
Query 563463 GAAAATTTGCAT 563474
|||||| |||||
Sbjct 446191 GAAAATCTGCAT 446202
Score = 104 bits (114), Expect = 2e-16
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322
|| || || || | |||| ||||| ||| |||||||||| |||||||| |||
Sbjct 445535 AGGACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCAGACAGAGTTCTGCCGTCT 445594
Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382
|| ||||| || || || ||||| | ||| || |||||||| || || || ||||||||
Sbjct 445595 TCGAGTTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGCGGGATACCCTCTTTATCC 445654
Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCGAGAGTAACAGT 563441
|||||||| ||| || || || || |||| | || | | || || || | ||
Sbjct 445655 TGAATTTTAGATTTCACATTATCGATAGTGTCAGAG-GACTCAACCTCAAGGGTGATGGT 445713
Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|| || || | |||||||||||||||||||||
Sbjct 445714 CTTTCCGGTCAAGGTTTTAACGAAAATTTGCATA 445747
Score = 102 bits (112), Expect = 7e-16
Identities = 135/185 (73%), Gaps = 2/185 (1%)
Strand=Plus/Plus
Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351
||| || || || | || ||||| ||||| ||||| || || || |||||||||||
Sbjct 445336 AATGTTATAGTCGGATAACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCT 445395
Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411
|||||| ||||| || |||||||| |||||||||||||| || || || || ||
Sbjct 445396 TTGCTGGTCAGGGGGGATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGT 445455
Query 563412 ATCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470
|||| | || | | || || || | || || || || | ||||||||||||||||
Sbjct 445456 GTCAGAG-GACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTT 445514
Query 563471 GCATA 563475
|||||
Sbjct 445515 GCATA 445519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029295629808430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |