Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq2 279 1e-69
seq4 250 5e-61
>seq2
Length=1516309
Score = 279 bits (308), Expect = 1e-69
Identities = 1045/1614 (65%), Gaps = 61/1614 (4%)
Strand=Plus/Plus
Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966
|||||||| |||||||| ||||| | || || || || ||| | ||| || |||||
Sbjct 916431 GGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAGATGTTGGAGGTGTAA 916490
Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026
||||||| | |||||| | |||| |||||| | || || || ||||| ||||||
Sbjct 916491 GGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATAGGAGCC 916550
Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086
|||| ||| || || | ||| | || ||| || | ||| ||||||||
Sbjct 916551 ACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCCCAGTCC 916610
Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146
|| |||| ||| | | |||| | ||| | ||| |||||||| || || |
Sbjct 916611 CA-----CAGATCGGT--TGG--CTTCTTGCCCCAAAGGTCGAACTGCAAAATACCCTGC 916661
Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206
| | || |||| | | ||| ||||| | |||||||||| ||
Sbjct 916662 GACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATCCCTAACGGCCAGCTCGGCAGAG 916721
Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266
|||| || || ||| ||||||||| || || |||| |||| |||| ||||||||
Sbjct 916722 GCCTCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCTCTGGCCTCT 916781
Query 213267 GGGGACGTGAAGGGCATCATCA--TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324
|| || || |||| ||| ||| | |||||| || ||||| |||||||| || |
Sbjct 916782 GGTGAGTCAAAAGGCAGTCTCAGCTGCAT--GAACACGTCGGCCAGGCCCTGGACACCCA 916839
Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGAC-TTGGAGCACTCCTCCAAGGGGTAAAAGTTG 213383
| | || || |||| | || ||| || || || ||| | || ||| ||||
Sbjct 916840 CGGCAATCGGCCTGTTGCGCATGTTGGATGTTCTTGC-CTCTGGAACAGGATAATAGTTT 916898
Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443
| ||||||||||||||||||||| ||| | || ||||||| ||| ||| | |||
Sbjct 916899 CTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTTCG 916958
Query 213444 TGATTGAACACG------TAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCC 213497
||| || | | | | || || || || | || |||||||| |||
Sbjct 916959 AAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCGATCGACGCC 917018
Query 213498 AGGTTGCAAACGGCCACCTCCT---GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554
| || || ||||||||||||| |||| || |||||| | || ||| |||||
Sbjct 917019 AAATTACACACGGCCACCTCCTCTGGAGA---TGAGTACTCGACAATTTCGCAGCACAAA 917075
Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTG 213614
|| | |||| | || ||||||| ||||| | ||| | |||| | ||||||
Sbjct 917076 TTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTCCTTG 917135
Query 213615 TAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTAC 213674
|| |||||| | || | || || || ||||| | ||| || | ||| || | |
Sbjct 917136 TACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAGCTTC 917195
Query 213675 CTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCT---CGTA-CTGTTCGTAGAG 213730
||||||||| | ||| | | ||| | | ||| |||| ||| | ||||||
Sbjct 917196 TGTGCCTTGACC----GTCTGGCGTCCACGGCCTT--CCTTTTCGTATCTGGT-GTAGAG 917248
Query 213731 CTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGA----CAGGATGCGGGACACA 213786
||| ||||| |||| ||| | || | || || ||| | | | ||| || |||
Sbjct 917249 CTCCTTGAACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGA-ACA 917307
Query 213787 TGAGGCTCCAGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGC 213845
| |||| || ||| | ||| |||||||| |||||||||||| || | |||||||
Sbjct 917308 ---GCGTCCACTCAGCGTTCTGCTC-GACTCTCTCCATGAACAGGTCTGGAATCCACAGC 917363
Query 213846 GCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGA 213905
|| | ||||||||| |||| || |||| ||| ||| ||| || || | || | |
Sbjct 917364 GCAGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATA 917423
Query 213906 AAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCC---TC 213962
|||||||| || |||| |||||| ||||| | ||| | ||||| ||||| |||| |
Sbjct 917424 AAGTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTG 917483
Query 213963 TTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGC 214022
||||| |||||||| || ||||| ||||||| | | || | || | |
Sbjct 917484 TTGCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATG 917543
Query 214023 CCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATG 214082
||||||||| ||||||||||| || || || || |||| || || | |||| |||
Sbjct 917544 CCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATG 917603
Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142
|| || ||||| || || ||||||||||| || ||| | | | || || |
Sbjct 917604 TGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAG 917663
Query 214143 ATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG 214202
|||||| | ||| ||| || | | | | |||||| ||| || | ||| ||
Sbjct 917664 ATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGG--AT 917721
Query 214203 GACGAG--CCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGA 214260
|| ||| || | || || || || || || ||| | | || || | || | |
Sbjct 917722 GAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCA 917781
Query 214261 GCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCAC-CTC 214319
| |||| ||||| | ||| ||| ||||| | ||||| | || ||| | |
Sbjct 917782 GGTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGC-CACACGC 917840
Query 214320 ATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGC--CCTTGAGCAGGTAGGAGC 214377
|| | |||||||||||| ||||| | | | ||| | ||| | || || || |
Sbjct 917841 ATGACCATGTGCTGGGG--TCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACC 917898
Query 214378 GCTCCAGAGTCTTGAACCCAAAGTAGGAGTAGGTATGATCGTTCCCGTGTATGAGGGCAG 214437
||||||| |||||||| ||||| ||| ||| | | || | ||| | | |||||
Sbjct 917899 GCTCCAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAG 917958
Query 214438 CGTCCAGCTCTTCCGCGTGCTCTTGGCTCAGCTTGAAAATCTCGTCCGAGATCA 214491
|| |||||| || |||||||| ||| | | | | | |||||||||||||
Sbjct 917959 AGTTCAGCTCGTCGGCGTGCTCCTGGACAATCCGGTACGTTTCGTCCGAGATCA 918012
>seq4
Length=1302532
Score = 250 bits (276), Expect = 5e-61
Identities = 577/855 (67%), Gaps = 36/855 (4%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || ||||| ||||| |||||||| ||||| || | | |||||||||||
Sbjct 919784 CTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGCAAGAGAGATGTTCTC 919843
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956
||||||| ||| ||||| | | ||| || | | || ||| |||| | |||
Sbjct 919844 CATGAAGTCGAACGGGTTTGTGGCGTTGTAGTGCTTCTTG-CAG-CCCAGAGATAAAAGC 919901
Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016
|| | || || || |||| | ||| | |||| ||| || |||||| || | |||
Sbjct 919902 AGCCGGTCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTTCATACCCAGCAGG 919961
Query 48017 GACACGGGCAAAGCCTTTGTGA-GAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075
|| |||| || | |||| | | ||| || || |||| ||||| || | ||
Sbjct 919962 TTGACAGGCAGGGCGTCGGTGAAGTATCTCTTT-TCGATCTCGACGGCCTCGGTGATGAT 920020
Query 48076 CTGCTTAACGCGG-GACTCTGA---GGGT-TTGTTGCGCAGGTGCTTGGCATAGAGCATG 48130
|| | | | || | | ||| |||| |||||| |||||| | ||||||
Sbjct 920021 CT--TGAGCACGATGTCGCTGTTTGGGGTGTTGTTG---AGGTGCGAGA---AGAGCAGA 920072
Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190
||||||||||| | |||| || ||||| | || ||| | | |||| |||||| |||
Sbjct 920073 CAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGA 920132
Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250
|||||||| | || |||| ||||||||||| || | || || ||||||||||||||
Sbjct 920133 CCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAA 920192
Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310
|| |||||||| || || ||||| ||| ||||| | || || | || ||| |
Sbjct 920193 ATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAACAGGGCTTCCTCGTCGTTG 920252
Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370
||||| | ||||| || ||||||| |||||| ||||| || ||||| ||||| |
Sbjct 920253 ATCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGGCGTTG 920312
Query 48371 AAGAGCTTCTTGCACTCACCT------GCGTCCGCAACATAGGTAGTGAGCAGCTTTGCG 48424
|| || | ||||| || | |||| || ||||| || ||| | |
Sbjct 920313 AAAAG------GAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGAG 920366
Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484
||| | || ||||| | ||||| || |||||||||||||||||| | ||||||||
Sbjct 920367 TACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTCA 920426
Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544
|| ||||| || | ||||| |||| | || ||||| ||||| || || || |||
Sbjct 920427 GGAACTTGCACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAA 920486
Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAA-TGGCGCTCGTTGTGGGTGAG---AGC 48600
|||||||||||||| | || | | || ||| | | |||||||| | ||||
Sbjct 920487 GCAGCAAAGAAGGCCAACAC-TCTCGAAACAAAGTATCTCTCGTTGTCGTTGAGTCTGTT 920545
Query 48601 ATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAG 48660
|||||| | || | ||| ||| ||| || | ||| || | |||||||| || ||
Sbjct 920546 GTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGCCTC 920605
Query 48661 TGCTTTTTTGTACAT 48675
||| || ||||||||
Sbjct 920606 TGCCTTCTTGTACAT 920620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532718490880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |