Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 279 1e-69 seq4 250 5e-61 >seq2 Length=1516309 Score = 279 bits (308), Expect = 1e-69 Identities = 1045/1614 (65%), Gaps = 61/1614 (4%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| |||||||| ||||| | || || || || ||| | ||| || ||||| Sbjct 916431 GGGTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAGATGTTGGAGGTGTAA 916490 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| | |||||| | |||| |||||| | || || || ||||| |||||| Sbjct 916491 GGCTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATAGGAGCC 916550 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086 |||| ||| || || | ||| | || ||| || | ||| |||||||| Sbjct 916551 ACCAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCCCAGTCC 916610 Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 || |||| ||| | | |||| | ||| | ||| |||||||| || || | Sbjct 916611 CA-----CAGATCGGT--TGG--CTTCTTGCCCCAAAGGTCGAACTGCAAAATACCCTGC 916661 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 | | || |||| | | ||| ||||| | |||||||||| || Sbjct 916662 GACGCCGGCGATCCCTCAAAGGTCTCGTATTTGCCATCCCTAACGGCCAGCTCGGCAGAG 916721 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 |||| || || ||| ||||||||| || || |||| |||| |||| |||||||| Sbjct 916722 GCCTCCAAAGCCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCTCTGGCCTCT 916781 Query 213267 GGGGACGTGAAGGGCATCATCA--TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 || || || |||| ||| ||| | |||||| || ||||| |||||||| || | Sbjct 916782 GGTGAGTCAAAAGGCAGTCTCAGCTGCAT--GAACACGTCGGCCAGGCCCTGGACACCCA 916839 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGAC-TTGGAGCACTCCTCCAAGGGGTAAAAGTTG 213383 | | || || |||| | || ||| || || || ||| | || ||| |||| Sbjct 916840 CGGCAATCGGCCTGTTGCGCATGTTGGATGTTCTTGC-CTCTGGAACAGGATAATAGTTT 916898 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 | ||||||||||||||||||||| ||| | || ||||||| ||| ||| | ||| Sbjct 916899 CTGTCGATGATCTTGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTTCG 916958 Query 213444 TGATTGAACACG------TAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCC 213497 ||| || | | | | || || || || | || |||||||| ||| Sbjct 916959 AAGTTGTACCAGCTGGTATTGTCGTCGGACTCAACGAAGGCTGGAAGGGCGATCGACGCC 917018 Query 213498 AGGTTGCAAACGGCCACCTCCT---GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554 | || || ||||||||||||| |||| || |||||| | || ||| ||||| Sbjct 917019 AAATTACACACGGCCACCTCCTCTGGAGA---TGAGTACTCGACAATTTCGCAGCACAAA 917075 Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTG 213614 || | |||| | || ||||||| ||||| | ||| | |||| | |||||| Sbjct 917076 TTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTCCTTG 917135 Query 213615 TAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTAC 213674 || |||||| | || | || || || ||||| | ||| || | ||| || | | Sbjct 917136 TACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAGCTTC 917195 Query 213675 CTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCT---CGTA-CTGTTCGTAGAG 213730 ||||||||| | ||| | | ||| | | ||| |||| ||| | |||||| Sbjct 917196 TGTGCCTTGACC----GTCTGGCGTCCACGGCCTT--CCTTTTCGTATCTGGT-GTAGAG 917248 Query 213731 CTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGA----CAGGATGCGGGACACA 213786 ||| ||||| |||| ||| | || | || || ||| | | | ||| || ||| Sbjct 917249 CTCCTTGAACTCGTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGA-ACA 917307 Query 213787 TGAGGCTCCAGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGC 213845 | |||| || ||| | ||| |||||||| |||||||||||| || | ||||||| Sbjct 917308 ---GCGTCCACTCAGCGTTCTGCTC-GACTCTCTCCATGAACAGGTCTGGAATCCACAGC 917363 Query 213846 GCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGA 213905 || | ||||||||| |||| || |||| ||| ||| ||| || || | || | | Sbjct 917364 GCAGGGAACAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATA 917423 Query 213906 AAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCC---TC 213962 |||||||| || |||| |||||| ||||| | ||| | ||||| ||||| |||| | Sbjct 917424 AAGTCAAAAATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTG 917483 Query 213963 TTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGC 214022 ||||| |||||||| || ||||| ||||||| | | || | || | | Sbjct 917484 TTGCCTCCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATG 917543 Query 214023 CCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATG 214082 ||||||||| ||||||||||| || || || || |||| || || | |||| ||| Sbjct 917544 CCGTTGGACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATG 917603 Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142 || || ||||| || || ||||||||||| || ||| | | | || || | Sbjct 917604 TGCAGACCAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAG 917663 Query 214143 ATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG 214202 |||||| | ||| ||| || | | | | |||||| ||| || | ||| || Sbjct 917664 ATGCCGTCGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGG--AT 917721 Query 214203 GACGAG--CCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGA 214260 || ||| || | || || || || || || ||| | | || || | || | | Sbjct 917722 GAGGAGTACCGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCA 917781 Query 214261 GCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCAC-CTC 214319 | |||| ||||| | ||| ||| ||||| | ||||| | || ||| | | Sbjct 917782 GGTTGTACGTCTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGC-CACACGC 917840 Query 214320 ATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGC--CCTTGAGCAGGTAGGAGC 214377 || | |||||||||||| ||||| | | | ||| | ||| | || || || | Sbjct 917841 ATGACCATGTGCTGGGG--TCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACC 917898 Query 214378 GCTCCAGAGTCTTGAACCCAAAGTAGGAGTAGGTATGATCGTTCCCGTGTATGAGGGCAG 214437 ||||||| |||||||| ||||| ||| ||| | | || | ||| | | ||||| Sbjct 917899 GCTCCAGCGTCTTGAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAG 917958 Query 214438 CGTCCAGCTCTTCCGCGTGCTCTTGGCTCAGCTTGAAAATCTCGTCCGAGATCA 214491 || |||||| || |||||||| ||| | | | | | ||||||||||||| Sbjct 917959 AGTTCAGCTCGTCGGCGTGCTCCTGGACAATCCGGTACGTTTCGTCCGAGATCA 918012 >seq4 Length=1302532 Score = 250 bits (276), Expect = 5e-61 Identities = 577/855 (67%), Gaps = 36/855 (4%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||| ||||| |||||||| ||||| || | | ||||||||||| Sbjct 919784 CTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGCAAGAGAGATGTTCTC 919843 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| ||| ||||| | | ||| || | | || ||| |||| | ||| Sbjct 919844 CATGAAGTCGAACGGGTTTGTGGCGTTGTAGTGCTTCTTG-CAG-CCCAGAGATAAAAGC 919901 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 || | || || || |||| | ||| | |||| ||| || |||||| || | ||| Sbjct 919902 AGCCGGTCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTTCATACCCAGCAGG 919961 Query 48017 GACACGGGCAAAGCCTTTGTGA-GAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075 || |||| || | |||| | | ||| || || |||| ||||| || | || Sbjct 919962 TTGACAGGCAGGGCGTCGGTGAAGTATCTCTTT-TCGATCTCGACGGCCTCGGTGATGAT 920020 Query 48076 CTGCTTAACGCGG-GACTCTGA---GGGT-TTGTTGCGCAGGTGCTTGGCATAGAGCATG 48130 || | | | || | | ||| |||| |||||| |||||| | |||||| Sbjct 920021 CT--TGAGCACGATGTCGCTGTTTGGGGTGTTGTTG---AGGTGCGAGA---AGAGCAGA 920072 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| | |||| || ||||| | || ||| | | |||| |||||| ||| Sbjct 920073 CAGGCAAAGTCGGTATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGA 920132 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | || |||| ||||||||||| || | || || |||||||||||||| Sbjct 920133 CCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAA 920192 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || |||||||| || || ||||| ||| ||||| | || || | || ||| | Sbjct 920193 ATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAACAGGGCTTCCTCGTCGTTG 920252 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| | ||||| || ||||||| |||||| ||||| || ||||| ||||| | Sbjct 920253 ATCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGGCGTTG 920312 Query 48371 AAGAGCTTCTTGCACTCACCT------GCGTCCGCAACATAGGTAGTGAGCAGCTTTGCG 48424 || || | ||||| || | |||| || ||||| || ||| | | Sbjct 920313 AAAAG------GAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGAG 920366 Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 ||| | || ||||| | ||||| || |||||||||||||||||| | |||||||| Sbjct 920367 TACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACACTTGGCCTCA 920426 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 || ||||| || | ||||| |||| | || ||||| ||||| || || || ||| Sbjct 920427 GGAACTTGCACCTCGGCAGAGAAGTTCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAA 920486 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAA-TGGCGCTCGTTGTGGGTGAG---AGC 48600 |||||||||||||| | || | | || ||| | | |||||||| | |||| Sbjct 920487 GCAGCAAAGAAGGCCAACAC-TCTCGAAACAAAGTATCTCTCGTTGTCGTTGAGTCTGTT 920545 Query 48601 ATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAG 48660 |||||| | || | ||| ||| ||| || | ||| || | |||||||| || || Sbjct 920546 GTTCCAGTCGTGCAGGTCCTTGGACAGATCGATTTCCTCTGCGGTCCAGAACGAGGCCTC 920605 Query 48661 TGCTTTTTTGTACAT 48675 ||| || |||||||| Sbjct 920606 TGCCTTCTTGTACAT 920620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532718490880