Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4 264 2e-65 seq2 235 1e-56 seq3 98.7 2e-15 >seq4 Length=1302532 Score = 264 bits (292), Expect = 2e-65 Identities = 592/874 (68%), Gaps = 52/874 (6%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||||||||| | ||| ||||||||| || || || ||| Sbjct 920632 GAGATTTGGCAGATGTACAAGAAGGCAGAGGCCTCGTTCTGGACCGCAGAGGAAATCGAT 920573 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAG-----CATTTTC 25588 ||| |||||||| || ||| |||| || | ||| ||| | || | || | Sbjct 920572 CTGTCCAAGGACCTGCACGACTGGAACAACAGACTCAACGACAACGAGAGATACTTTGTT 920513 Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648 || || |||||||| |||||||| || || || || || || |||||||| || || Sbjct 920512 TCGAGA--GTGTTGGCCTTCTTTGCTGCTTCGGACGGCATTGTCAACGAGAACTTGGTCG 920455 Query 25649 AGAGATTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATG 25707 ||| ||| | || ||||| || | || ||||||||||||||||||| |||||||| Sbjct 920454 AGAACTTCTCTGCCGAGGTGCAAGTTCCTG-AGGCCAAGTGTTTCTACGGGTTCCAGATC 920396 Query 25708 GCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACA 25764 || || || | ||||| || ||| | ||||||||| || ||| | | Sbjct 920395 ATGATGGAGAACATCCACTCGGAAACGTACTC---GCTTCTGATCGACACCTACGTCAAG 920339 Query 25765 GACGTCGCCGA--GA----GAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATC 25818 ||| || | || ||| || || || ||||| ||| ||| || | ||| Sbjct 920338 GAC----CCTAAGGAAGCTGAGTTC--CTTTTCAACGCCATTGAGACCATCCCATGTATC 920285 Query 25819 AAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAG--AGCGCTACGTTTGGCG 25876 ||| |||||| |||||||||| ||||||||| | || ||| || ||||| || Sbjct 920284 AAGGAGAAGGCCGAATGGGCCATGAGATGGATCAACGACGAGGAAGCCCT--GTTTGCCG 920227 Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 || | || || || |||||||| |||||||| || || ||| || |||||||| | | Sbjct 920226 AGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGCTCGTTTGCCTCGA 920167 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACC-ATGCCCGGGCTGTACTTTTCCAACGAGCTCATC 25995 |||||||||||||| ||| | |||| ||||| || ||| ||| || |||||| | ||| Sbjct 920166 TCTTCTGGCTCAAGAAGA-GAGGACTGATGCCTGGTCTGACCTTCTCGAACGAGTTGATC 920108 Query 25996 AGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTC 26055 |||| ||||||||||| || | || |||||||| ||||||| | || ||| ||| Sbjct 920107 TGCAGAGACGAGGGTCTGCATACCGACTTTGCCTGTCTGCTCTTCTCG---CAC---CTC 920054 Query 26056 CACAA-ACCTTCTCAAGAGAC--CGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAG 26112 |||| ||| || ||| ||| || ||||||| ||||| || |||||||| Sbjct 920053 AACAACACCCCAAACAGCGACATCGTGCTCAAGATCATCACCGAGGCCGTCGAGATCGA- 919995 Query 26113 AAGGAGTTTC-NNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCAT 26171 || ||| | | |||| |||||| || || || Sbjct 919994 AAAGAGATACTTCACCGACGCCCTGCCTGTCAACCTGCTGGGTATGAACTGCAACCTGAT 919935 Query 26172 GAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGA-- 26229 | |||| ||| | |||| ||| || |||| ||||| | ||||| || || ||| Sbjct 919934 GTGCCAGTACGTGGAGTTTGTTGCTGACCGGCTGCTTTTATCTCTGGG-CT-GCAAGAAG 919877 Query 26230 CTCTACAGTACGC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGA 26287 | ||||| |||| | |||||||||||||| ||||| ||||| || | | ||| |||| Sbjct 919876 CACTACA--ACGCCACAAACCCGTTCGACTTCATGGAGAACATCTCTCTTGCAGGCAAGA 919819 Query 26288 CCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||||||||| || ||||| ||| ||| || || Sbjct 919818 CCAACTTCTTCGAGAAGAGAGTCTCCGATTACCA 919785 >seq2 Length=1516309 Score = 235 bits (260), Expect = 1e-56 Identities = 820/1257 (65%), Gaps = 37/1257 (3%) Strand=Plus/Plus Query 221427 CGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT-TGGCCTCGGGAGAAGTGAAG 221485 |||||||||||||||| || ||| |||| || |||| ||||||| || || || Sbjct 916735 CGTGGTAGATGGTCTCGAAAATCTGGATGTTCAG-CTCTCTGGCCTCTGGTGAGTCAAAA 916793 Query 221486 GGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTG 221545 |||| | |||| | || ||||||||||| ||||| || || | | || |||||| Sbjct 916794 GGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGGACACCCACGGCAATCGGCCTG 916853 Query 221546 TGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTG 221605 | | | ||||||| | || ||||| || |||||| |||| |||||| | ||| Sbjct 916854 TTGCGCATGTTGGATGTTCTTGCCTCTGGAACAGGATAATAGTTTCTGTCGATGATCTTG 916913 Query 221606 TTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAAC 221665 ||||||||| ||||| || || | || | |||||| | | ||| || || | Sbjct 916914 TTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTTCGAAGTTGTAC--CAGC 916971 Query 221666 TCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACAC 221725 | | ||||| | | || || || || ||||| | |||| |||||| Sbjct 916972 TGGTATT-GTCGTCG---GACTCAACGAAGGCTGGAAGGGCGATCGACGCCAAATTACAC 917027 Query 221726 ACGGCCACCTCGTCCTTGTTGGTA--TACTGTATGATCTCTGTACAGAGGTTGCTGCACT 221783 ||||||||||| || || | | |||| | || || || | || ||| Sbjct 917028 ACGGCCACCTCCTC--TGGAGATGAGTACTCGACAATTTCGCAGCACAAATTAGACGACT 917085 Query 221784 TGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAG-CGTCCTTGTAGAGCATA 221842 ||||| | || |||| || || || | |||| || | |||| |||||||||| ||||| Sbjct 917086 TGATGATACCAAGGTTCTTCTGGTTGGTCTTG-GAGTTGCAGGCGTCCTTGTACAGCATG 917144 Query 221843 AAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCT 221901 || || ||| || ||| ||| ||| ||| ||| || ||| || | |||| || | Sbjct 917145 AATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAGCT-TCTGTGCCTT 917203 Query 221902 CACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTT 221961 |||||| | | | ||| | |||||| || | ||| |||||| | |||| Sbjct 917204 GACCGTC---TGGCGTCCACGGCCTTCCTTTTCGTATCTGGTGTAGAGCTCCTTGAACTC 917260 Query 221962 TTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTT 222021 || |||||| | ||| || |||||| | || || | | ||| |||| | Sbjct 917261 GTCGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACAGCGTCCACTCAGC 917320 Query 222022 GTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCT 222081 ||| | | ||| |||| |||||| ||||| || ||||||||||| | || || ||||| Sbjct 917321 GTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAGGTCTCT 917380 Query 222082 GG-TCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAG 222140 || || | | ||||||| || | ||| |||| | || | ||| |||||||| || | Sbjct 917381 GGCTCTGAT-CTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAAAATATCCG 917439 Query 222141 CGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCA 222200 |||||| ||||| | || | || | ||||| || ||||||||||| ||||| || | Sbjct 917440 AGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCCCTGGTCGA 917499 Query 222201 CCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGT 222260 | || | |||||| | | | | || | | |||||||| |||| Sbjct 917500 CGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGTGCCGT 917559 Query 222261 TGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT---ACTG-GCAGACATGCCGATA 222316 |||| || ||||| | ||| || || | ||| | || ||||| || || Sbjct 917560 TGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGA----CCAATG 917615 Query 222317 CCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATA 222376 || || || || ||||||| || ||| ||||||| ||||| |||||| || || Sbjct 917616 CCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGTCGATG 917675 Query 222377 GAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCG 222436 ||||| ||||| | | | || ||||| || |||||||| | | | | || ||| Sbjct 917676 GAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTACCGGCA 917735 Query 222437 TTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCT 222496 |||||||| || || ||||| || ||| | |||||||| | ||||||||| Sbjct 917736 TTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGTCTCG 917795 Query 222497 ACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGG 222556 | ||| |||| |||| || || || || ||||| | |||| ||||| |||| Sbjct 917796 ATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCATGACCATGTGCTGG 917855 Query 222557 GGCCTCTCCACAGGAC----CCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTT 222612 || ||||| | ||| || | | || | || || || || ||||| ||||| Sbjct 917856 GGTCTCTCGGC--GACTTTTCCATCAATCTTCA-AG-AGATATGACCGCTCCAGCGTCTT 917911 Query 222613 GAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTC 222669 ||| ||||| |||||| ||||||||| ||| || | ||| | || |||||| Sbjct 917912 GAAGCCAAAATAGTTGTACGAAAAGTCTCTATCGTACACTATGGCAGAGTTCAGCTC 917968 >seq3 Length=1363476 Score = 98.7 bits (108), Expect = 2e-15 Identities = 455/701 (65%), Gaps = 37/701 (5%) Strand=Plus/Minus Query 221767 ACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGC 221826 |||||| ||| |||||||||| |||| | | || |||||||| |||| || Sbjct 659332 ACAGAGATTGGATGACTTGATGGTACCCAAATTTTGCTGGTTAGACTTTTTATTGCAGGC 659273 Query 221827 GTCCTTGTAGAGCAT-AAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCC 221885 ||| |||||||||| |||||| | || || ||| ||||| || || ||| | || Sbjct 659272 GTCTTTGTAGAGCAGGAAAGGGGTC-CCTGTTTCCGTCTGAGAAACTAGTATCGCATGCC 659214 Query 221886 AGAGTTCTCTGG-CGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGT 221943 | |||| ||||| | |||| | | | | || |||||| |||||||| | | Sbjct 659213 ACAGTT-TCTGGGCTTTCACTTTACGGAT-ATAGCGACCCTCACG---TTCATACCTGTT 659159 Query 221944 ATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACA-----CCTGGCG 221998 || ||| || |||| | || || || | || || || ||| | ||| | Sbjct 659158 GTAAAGCTTGACAAATTCATCTCCATAAGTGTCACTGAGTCCAGGAGATTGATCCTCG-- 659101 Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTT-GACCCTCTGCATGAAGAGGTCCGGGAT 222057 || | | || | ||| | |||| | | | | ||| ||| ||| || | || || || Sbjct 659100 -GAAAAA--AGGCACCACT-CTTGATCTTTCTCGACTTTCTCCATAAACAAATCTGGTAT 659045 Query 222058 CCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAG 222117 ||| || || | ||| | |||||| | || || ||| || | ||||||||||| Sbjct 659044 CCAAAGAGCATAAAATAAATCTCTAGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCAA 658985 Query 222118 ATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGG 222177 |||| |||||||| | ||| || ||||||||||| | ||| | | | |||||| || Sbjct 658984 GTCCAGGAACTCAAACACGTCTGCATGCCACGGCTCTAAATACATGCAAAAAGCGCCTGG 658925 Query 222178 TCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCG 222236 || || || ||||| ||||||| | | || | | | || ||| |||| ||| | | Sbjct 658924 TCTTTTATTTCCACCTTGATCCA-CGTACTTTGCGGTGCTGTTAAAGACTTGAATCATAG 658866 Query 222237 GTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT 222296 | || |||||||||||| ||| || || || |||||| | ||| | || | | || Sbjct 658865 GCACAAGTCCGTTGGATGTACCATTAGTTCCAGAAATGTAAGAGCCGGCAGCTCGGATGT 658806 Query 222297 TACTGGCAGAC----ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTG 222352 | || | || ||||| || || || || ||| || |||| |||| | |||| Sbjct 658805 T--TG--AAACGTGTATGCCAATTCCGCCAGCCGCTTTAGAAATCAGGGCGGA---CTTG 658753 Query 222353 AGAGT-GTCC--ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGAC 222409 || | || | | ||||| | ||||||||| | | | || |||||||| || Sbjct 658752 TGAATCGTTCTGAAAATGCCATTTATAGAGTCCCCATCCATTGCAAGAAGAAAACAGGAG 658693 Query 222410 GACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGG 222450 || | | || | || || |||||| |||||||| || Sbjct 658692 GATAAATTAGGCGTTTCGGTACCGGCGTTGAACAGCGTAGG 658652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844718726080