Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq3 132 2e-26 seq2 116 2e-21 >seq3 Length=1363476 Score = 132 bits (146), Expect = 2e-26 Identities = 168/230 (73%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 25915 ATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCT 25974 || || ||| |||||||||||||| |||||||| ||||| | ||||||||||||||||| Sbjct 659080 ATCTTTCTCGACTTTCTCCATAAACAAATCTGGTATCCAAAGAGCATAAAATAAATCTCT 659021 Query 25975 CGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGA 26034 || | ||||||| ||||| || || || | | || | ||| ||||| | |||| Sbjct 659020 AGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCAAGTCCAGGAACTCAAACACGTCTGC 658961 Query 26035 GTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTAC 26094 ||||| || |||||||| || |||| ||| |||||| |||||||||||| || Sbjct 658960 ATGCCACGGCTCTAAATACATGCAAAAAGCGCCTGGTCTTTTATTTCCACCTTGATCCAC 658901 Query 26095 GTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTG 26144 ||| |||| || || || |||| | ||| || || | ||| |||| Sbjct 658900 GTACTTTGCGGTGCTGTTAAAGACTTGAATCATAGGCACAAGTCC-GTTG 658852 >seq2 Length=1516309 Score = 116 bits (128), Expect = 2e-21 Identities = 215/313 (69%), Gaps = 2/313 (1%) Strand=Plus/Plus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||| ||||| || ||||| ||| ||||||| || | ||||||||||||| ||| || Sbjct 917312 CCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAA 917371 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 | ||||| ||||| || || || || || || ||||| | || | || ||||| Sbjct 917372 CAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAA 917431 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085 |||||| ||||||||||| || | || | |||||| || | || || || Sbjct 917432 AATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCC 917491 Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145 || || |||||||| || || | ||||| ||| ||| |||||||| | || | |||| Sbjct 917492 CTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAA-TGATGCCGTTGG 917550 Query 26146 AAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATAC 26204 | | ||||| || | | || | || || || |||||||| | |||| || | || Sbjct 917551 ACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGAC 917610 Query 26205 CGATTCCACCAGC 26217 | || || ||||| Sbjct 917611 CAATGCCTCCAGC 917623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039978412525