Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq3 132 2e-26
seq2 116 2e-21
>seq3
Length=1363476
Score = 132 bits (146), Expect = 2e-26
Identities = 168/230 (73%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 25915 ATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCT 25974
|| || ||| |||||||||||||| |||||||| ||||| | |||||||||||||||||
Sbjct 659080 ATCTTTCTCGACTTTCTCCATAAACAAATCTGGTATCCAAAGAGCATAAAATAAATCTCT 659021
Query 25975 CGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGA 26034
|| | ||||||| ||||| || || || | | || | ||| ||||| | ||||
Sbjct 659020 AGCGCGAGTTTCTTCCTTTCCATGGTTTTTCCTCAAGTCCAGGAACTCAAACACGTCTGC 658961
Query 26035 GTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTAC 26094
||||| || |||||||| || |||| ||| |||||| |||||||||||| ||
Sbjct 658960 ATGCCACGGCTCTAAATACATGCAAAAAGCGCCTGGTCTTTTATTTCCACCTTGATCCAC 658901
Query 26095 GTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTG 26144
||| |||| || || || |||| | ||| || || | ||| ||||
Sbjct 658900 GTACTTTGCGGTGCTGTTAAAGACTTGAATCATAGGCACAAGTCC-GTTG 658852
>seq2
Length=1516309
Score = 116 bits (128), Expect = 2e-21
Identities = 215/313 (69%), Gaps = 2/313 (1%)
Strand=Plus/Plus
Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965
||| ||||| || ||||| ||| ||||||| || | ||||||||||||| ||| ||
Sbjct 917312 CCACTCAGCGTTCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAA 917371
Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025
| ||||| ||||| || || || || || || ||||| | || | || |||||
Sbjct 917372 CAGGTCTCTGGCTCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAA 917431
Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085
|||||| ||||||||||| || | || | |||||| || | || || ||
Sbjct 917432 AATATCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCC 917491
Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145
|| || |||||||| || || | ||||| ||| ||| |||||||| | || | ||||
Sbjct 917492 CTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAA-TGATGCCGTTGG 917550
Query 26146 AAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATAC 26204
| | ||||| || | | || | || || || |||||||| | |||| || | ||
Sbjct 917551 ACGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGAC 917610
Query 26205 CGATTCCACCAGC 26217
| || || |||||
Sbjct 917611 CAATGCCTCCAGC 917623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039978412525
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |