Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1 167 4e-36
seq2 123 4e-23
seq7 107 3e-18
>seq1
Length=1541475
Score = 167 bits (184), Expect = 4e-36
Identities = 179/237 (76%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | ||||||||||| || | ||| || ||| ||
Sbjct 445282 AATTTGCATACCACCTCTCAATCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTT 445341
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||||||||||||||||| || || | ||| || || || ||||| | ||| || ||
Sbjct 445342 ATAGTCGGATAACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTG 445401
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||||| || |||||||| |||||||| ||||||| || | ||| ||||| || ||
Sbjct 445402 GTCAGGGGGGATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGA 445461
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||||||| || || || || || || || || | ||||| || || ||||||||
Sbjct 445462 GGACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445518
Score = 158 bits (174), Expect = 2e-33
Identities = 179/240 (75%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| || |||| ||||| |||| |||||| ||| ||
Sbjct 445966 AATTTGCATACCACCTCTCAATCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTT 446025
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|| ||||| | |||||| || |||| || || || |||||||| | ||| || ||
Sbjct 446026 GTAATCGGACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTG 446085
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
|||||||| |||||||| |||||||| || || | ||| | ||| ||||| || ||
Sbjct 446086 GTCAGGAGGGATTCCTTCCTTATCTTGAATCTTCGATTTGACATTATCGATAGTGTCAGA 446145
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||| || || |||| ||| |||||||| || || | || || || || || ||||||||
Sbjct 446146 AGATTCTACCTCTAAAGTGATAGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCATTTT 446205
Score = 152 bits (168), Expect = 9e-32
Identities = 176/237 (74%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| || ||||| ||||| |||| |||||| ||| ||
Sbjct 445510 AATTTGCATACCACCTCTCAATCTCAGGACCAGGTGCAAGGTAGACTCTTTCTGAATGTT 445569
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|| || || | ||||| || || | ||| || || || ||||| |||||||||||
Sbjct 445570 GTAATCAGACAGAGTTCTGCCGTCTTCGAGTTGCTTACCAGCGAAAATCAATCTCTGTTG 445629
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
|||||| || || || |||||||| || ||||| | ||| | ||| ||||| || ||
Sbjct 445630 ATCAGGCGGGATACCCTCTTTATCCTGAATTTTAGATTTCACATTATCGATAGTGTCAGA 445689
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||||||| || || || || || || || || | ||||| || || ||||||||
Sbjct 445690 GGACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445746
Score = 149 bits (164), Expect = 1e-30
Identities = 175/237 (74%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | ||||| ||||| || | ||| || ||| ||
Sbjct 445738 AATTTGCATACCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTT 445797
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|| ||||| | |||||| || |||| || || || |||||||| | ||| || ||
Sbjct 445798 GTAATCGGACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTG 445857
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
|||||||| |||||||| |||||||| ||||||| || | ||| ||||| || ||
Sbjct 445858 GTCAGGAGGGATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGA 445917
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||||||| || || || || || || || || | ||||| || || ||||||||
Sbjct 445918 GGACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445974
Score = 118 bits (130), Expect = 2e-21
Identities = 169/238 (71%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 193123 TAATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATAT 193182
||||| | | ||||||||||| || | |||| ||| | |||| || || ||| |
Sbjct 445053 TAATTCAGAAACCACCTCTCAGTCTCAAAACCAAATGAAGAGTAGATTCCTTCTGAATGT 445112
Query 193183 TATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTT 193242
| || ||||| | |||||| || |||| || || || |||||||| | ||| || |
Sbjct 445113 TGTAATCGGACAGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCT 445172
Query 193243 GATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302
| ||||| || |||||||| ||||| || ||||||| || | || ||||| || |
Sbjct 445173 GGTCAGGGGGGATTCCTTCCTTATCCTGAATTTTGGACTTGACGTTATCGATAGTGTCAG 445232
Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| |||||||| || || || || || || || || | ||||| || || ||||||||
Sbjct 445233 AGGACTCAACCTCAAGGGTGATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 445290
>seq2
Length=1516309
Score = 123 bits (136), Expect = 4e-23
Identities = 167/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||||| || || |||| |||||| || | |||||| || || |||||
Sbjct 177334 ATACCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCT 177393
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | ||||| || || | ||| || ||||| || || ||||| || || ||||||
Sbjct 177394 GAAAGGGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGA 177453
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||||||||| ||||| || |||| || | || || || |||||||||||
Sbjct 177454 GGGATTCCTTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCG 177513
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| || | || || || || || || | || || || || || ||||||||
Sbjct 177514 ACCTCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCATTTT 177566
>seq7
Length=988507
Score = 107 bits (118), Expect = 3e-18
Identities = 163/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
||||||||||| || || ||||| ||||| || | ||| || || || ||||| ||
Sbjct 50076 ACCACCTCTCAGTCTGAGGACCAGGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGA 50135
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
| ||||| || || | || || || || ||||| | ||| || || ||||| ||
Sbjct 50136 AAGAGTTCTGCCGTCCTCGAGCTGCTTACCAGCGAAAATCAGTCTTTGCTGGTCAGGTGG 50195
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
||||| || || || || || |||| || | || || || ||||||||||| ||
Sbjct 50196 GATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 50255
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA 193364
|| || || ||||| ||||| || || || || || || ||||||||| ||
Sbjct 50256 CTCGAGGGTGATAGTCTTACCGGTCAGGGTCTTGACGAAGATTTGCATTGTA 50307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899654321280240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |