Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq4 96.9 1e-14
seq2 89.7 2e-12
>seq4
Length=1302532
Score = 96.9 bits (106), Expect = 1e-14
Identities = 387/595 (65%), Gaps = 17/595 (3%)
Strand=Plus/Minus
Query 133073 AGGTTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAA-CAGCA 133131
|||||||| ||||||| || ||| || ||||||||||||||||||| || || ||| |
Sbjct 920662 AGGTTTGTCTTGTTCCCTATCAAGTACCACGAGATTTGGCAGATGTACAAGAAGGCAG-A 920604
Query 133132 AGATTTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGC 133191
| | || ||||| || ||| | ||| | ||||| |||| | ||||| |
Sbjct 920603 GGCCTCGTTCTGGACCGCAGAGGAAATCGATCTGTCCAAGGACCTGCACGACTGGAACAA 920544
Query 133192 C---CTTACTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAG 133248
| || | | | || | | | ||| |||| | | || || || ||||||||
Sbjct 920543 CAGACTCAACGACAACGAGAGATACTTTGTTTCGAGAGTGTTGGCCTTCTTTGCTGCTTC 920484
Query 133249 TGATGGTATTGTTCTTGAAAATTTAG--GAACACGGTTTATGGGAGAAGTTCAACTGGCC 133306
|| || ||||| || || || | || || | | || || || ||| | |
Sbjct 920483 GGACGGCATTGTCAACGAGAACTTGGTCGAGAACT-TCTCTGCC-GAGGTGCAAGTTCCT 920426
Query 133307 GAAGCCC-GTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATA 133365
|| ||| ||| || || ||| | ||||| |||||| || ||||| || || ||
Sbjct 920425 GAGGCCAAGTGT-TTCTACGGGTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTA 920367
Query 133366 TTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAA--CTATTCAAC 133423
|| ||| || || || ||| |||| || || | ||||| | || ||||||
Sbjct 920366 CTCGCTTCTGATCGACACCTACGTCAAGGA--CCCTAAGGAAGCTGAGTTCCTTTTCAAC 920309
Query 133424 GCCATTAGCGA-ATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCA 133482
|||||| | || | || ||||| || |||| | || ||||| || | ||||||| |
Sbjct 920308 GCCATT-GAGACCATCCCATGTATCAAGGAGAAGGCCGAATGGGCCATGAGATGGATCAA 920250
Query 133483 GGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttt 133542
||| || || ||||| | |||||||| ||||||| || ||||| |||||
Sbjct 920249 CGACGAGGAAGCCCTGTTTGCCGAGAGACTCGTTGCGTTTGCTGCCGTGGAGGGTATTTT 920190
Query 133543 tttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACT 133602
||| ||| |||| ||| || || ||||| || ||| | || | | ||||| ||
Sbjct 920189 CTTCTCTGGCTCGTTTGCCTCGATCTTCTGGCTCAAGAAGAGAGGACTGATGCCTGGTCT 920130
Query 133603 GTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657
| || || ||||| | || | || ||||||| || || ||||| ||||||
Sbjct 920129 GACCTTCTCGAACGAGTTGATCTGCAGAGACGAGGGTCTGCATACCGACTTTGCC 920075
Score = 91.5 bits (100), Expect = 4e-13
Identities = 322/498 (65%), Gaps = 14/498 (3%)
Strand=Plus/Plus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|||||||| || || | | || |||||| || | ||||||||| || || || ||
Sbjct 1175048 CTATCAAATCTGCCGGGTCTGGTCAATGCTTTATCCAGTATATCGGCCCTATTCGTACCT 1175107
Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969
|| | || ||||| || || | || |||||||||||| ||| | |||||
Sbjct 1175108 GCAAGAACCACAATGTGATCAGTATCCTCAAATCCATCCATTTCGACTAAGAGCTGATTC 1175167
Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029
| |||| ||| |||| || || | ||| ||| ||| | || ||| |||
Sbjct 1175168 AATGTTGCTTCTTTTTCGTCGTTCGCACCCATTGGTCCAC-----TTTCT-CTTGACTTA 1175221
Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089
|||| ||||| || || || | || || | ||| |||| | ||| || | | |
Sbjct 1175222 CCAATGGCATCGATCTCATCCACAAATATGATACAAGGAGCTAGCTTTCTGGCTGTAGAA 1175281
Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149
|| || || | || | || || || | |||||| ||||| || || ||||| ||| |
Sbjct 1175282 AACAAATCGCGAACTCTAGAAGCACCGACACCAACGTACATCTCGACGAATTCGGAACCA 1175341
Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209
|| || || |||| ||| || || || ||| || | || | | || |||
Sbjct 1175342 GAAACAGAAAGAAATGGCACACCAGCCTCTCCCGCTGTGGCTTTAGCTAACAAGGTTTTA 1175401
Query 289210 CCTGTTCCAGGTGGTCCCTCTAATAGAA---CTCCCTTTGGTACTTTTGC-CCCAGCAGA 289265
||||| || || || | || | |||| | || ||||| | ||| || |||| |
Sbjct 1175402 CCTGTACCTGGGGGGC---CTGAAAGAATGGCGCCTTTTGGAATTTTGGCACCCAAC-TT 1175457
Query 289266 CTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325
|| ||||||| ||| |||||||||| |||| |||| || ||| | || || ||
Sbjct 1175458 CTCGTATTTCTTAGGCTCCTTTAAAAATGTGACAAATTCCATAATTTCCTCCTTAGCTTC 1175517
Query 289326 ATCACATCCTGCTACATC 289343
|||||| || || |||||
Sbjct 1175518 ATCACAACCGGCAACATC 1175535
>seq2
Length=1516309
Score = 89.7 bits (98), Expect = 2e-12
Identities = 124/171 (73%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCACA 155647
|| ||||||| |||||| || || ||||| || | | ||| || ||||| || ||
Sbjct 917010 ATCGACGCCAAATTACACACGGCCACCTCCTCTGGAGATGA-GTACTCGACAATTTCGCA 917068
Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707
||||| ||||| ||||||| | || | ||||||||||| | || ||| || ||
Sbjct 917069 GCACAAATTAGACGACTTGATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGC 917128
Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT 155758
|||||||| || ||| |||| || ||||| ||| |||| || |||| |||
Sbjct 917129 GTCCTTGTACAGCATGAATGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAAT 917179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817467996359
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |