Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq4 140 4e-27
seq2 140 4e-27
seq6 96.9 4e-14
seq5 93.3 5e-13
>seq4
Length=1302532
Score = 140 bits (154), Expect = 4e-27
Identities = 232/330 (70%), Gaps = 9/330 (3%)
Strand=Plus/Plus
Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743
|||| |||||| ||| ||| || | | |||||| |||||||||||||| | ||
Sbjct 919772 GACGCCCGCCTTCTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGCAAG 919831
Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAG 868803
||||| |||||| | ||||||||| | | ||||||||||| | ||| || ||
Sbjct 919832 AGAGATGTTCTCCATGAAGTCGAACGGGTTTGTGGCGTTGTAGTGCTTCTTGCAGCCCAG 919891
Query 868804 CGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCAT 868863
|| ||||| ||||| || |||||||| | |||||||||||| ||| | ||||||
Sbjct 919892 AGATAAAAGCAGCCGGTCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTTCAT 919951
Query 868864 GCCGATGAGCGCCACCGGCAGCGACTCGCT-CACAAACTCTTTCTCGATCTCGACGGCCT 868922
|| | || || ||||| | ||| | | | |||||| ||||||||||||||||
Sbjct 919952 ACCCAGCAGGTTGACAGGCAGGGCGTCGGTGAAGTATCTCTTT-TCGATCTCGACGGCCT 920010
Query 868923 CGACGATGATCTGCCTGGGCAC---GTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGA 868979
|| |||||||| || |||| |||| || ||||| ||| || | |||
Sbjct 920011 CGGTGATGATCT---TGAGCACGATGTCGCTGTTTGGGGTGTTGTTGAGGTGCGAGAAGA 920067
Query 868980 GCAGGCAGGCAAAGTCGCAGTGCA-ACCCT 869008
|||| |||||||||||| |||| |||||
Sbjct 920068 GCAGACAGGCAAAGTCGGTATGCAGACCCT 920097
Score = 129 bits (142), Expect = 7e-24
Identities = 215/309 (70%), Gaps = 10/309 (3%)
Strand=Plus/Plus
Query 869158 GGCAAAGAGGGCACTATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAG 869217
||||||| || ||||| ||| ||||| | | ||||| ||||| |||| ||
Sbjct 920075 GGCAAAGTCGG---TATGCAGACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAG 920131
Query 869218 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAA 869277
|| ||||| || || | |||||||||||| ||||| | | || ||| ||||| ||
Sbjct 920132 ACCAGGCATCAGTCCTCTCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAA 920191
Query 869278 GATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGC--CCTCC 869335
|| ||||| ||||| ||||| | | ||| | ||||||||| | ||| ||||
Sbjct 920192 AATACCCTCCACGGCAGCAAACGCAACGAGTCTCTCGGCAAA-----CAGGGCTTCCTCG 920246
Query 869336 TTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATG 869395
| ||||||||| |||| ||||| |||||||| | | | | | || | || || |||
Sbjct 920247 TCGTTGATCCATCTCATGGCCCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATG 920306
Query 869396 GCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAA 869455
||| || ||| || ||| ||||||||||| |||||||||||||| |||||
Sbjct 920307 GCGTTGAAAAGGAACTCAGCTTCCTTAGGGTCCTTGACGTAGGTGTCGATCAGAAGCGAG 920366
Query 869456 TAGGTCTCC 869464
|| || |||
Sbjct 920367 TACGTTTCC 920375
>seq2
Length=1516309
Score = 140 bits (154), Expect = 4e-27
Identities = 267/394 (68%), Gaps = 17/394 (4%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||||||||| | || |||| ||| || || | | ||| || | || |||||||||
Sbjct 917492 CTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGA 917551
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCG-GCAAAGC 1630183
| ||||||||| || || | ||| | |||| || | | ||||| | ||| | |
Sbjct 917552 CGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGA-C 917610
Query 1630184 CGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCT 1630243
| ||||| || || | ||||||||| || || || ||||| ||||| |||||||| |
Sbjct 917611 CAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGT 917670
Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303
|||| |||||| |||||||| | || | || || || || | ||||| || | || |
Sbjct 917671 CGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTAC 917730
Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGG 1630363
|||| || || || || |||| ||| |||||| || | ||||||| || ||| |
Sbjct 917731 CGGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACG 917790
Query 1630364 TGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGA 1630423
| ||| |||| | | ||||| |||| | || ||||| |
Sbjct 917791 TCTCGATGACGCTGGGAATGTCATCG---------------CCATGGATACCAATGGCCA 917835
Query 1630424 CGCGCATGAGCATGTACTGGGGCCGCTCGACGAC 1630457
| ||||||| ||||| |||||| | |||| ||||
Sbjct 917836 CACGCATGACCATGTGCTGGGGTCTCTCGGCGAC 917869
>seq6
Length=996047
Score = 96.9 bits (106), Expect = 4e-14
Identities = 158/225 (70%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 509048 GGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATGTTTCTGCACATG 509107
|| |||||||||||||| | | ||| |||| ||| |||| | | | |||
Sbjct 771851 GGGTTTGTGCGCAACTCTTTCTTTTCCGGGCTCAGTCCGCCCGAGTTCCTGTTCCACGCC 771792
Query 509108 ATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCCGAGACGGGCTACATC 509167
||| ||| | ||||| || || || ||||| |||||||| || ||||||||||||| |
Sbjct 771791 ATCTCCGGCAGAGAGGGGCTAGTGGATACGGCTGTCAAGACCGCAGAGACGGGCTACACC 771732
Query 509168 CAGCGCCGGTGCATCAAGTCGATGGAGAGCCTGCAGATCAAGC-GCGGCGGCCTCGTGCG 509226
||| ||| || |||||||||||| |||| || | || || || ||||||
Sbjct 771731 TCGCGGCGGCTGATGAAGTCGATGGAGGACCTG-AGTGCCGGCTACGACGAGACCGTGCG 771673
Query 509227 CAACGCCAACGGCGACATCGTCCAGTTTGCCTATGGCGGCGACGG 509271
|||| | | | || |||||| ||||| |||||| ||||||||
Sbjct 771672 CAACTCGAGCAACGGCATCGTGCAGTTCAACTATGGAGGCGACGG 771628
>seq5
Length=1266025
Score = 93.3 bits (102), Expect = 5e-13
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 1592174 GAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAG 1592233
||| | || || || ||||| |||||| |||||||||| ||||| | || ||||||
Sbjct 516099 GAGATCATTCTTGCTGCCAATTACCTCAACATCAAGCCGCTGCTGAACGCCGGATGCAAG 516158
Query 1592234 TCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292
|||||| | |||||| |||||||| || ||||||||||||||||| || |||||
Sbjct 516159 GTTGTGGCGGAGATGATCCGCGGCAAGTCTCCTGAGGAGATCCGCAAGACTTTCAACAT 516217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107138625547219
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |