Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 140 3e-28 seq1 107 2e-18 >seq2 Length=1516309 Score = 140 bits (154), Expect = 3e-28 Identities = 955/1514 (63%), Gaps = 46/1514 (3%) Strand=Plus/Plus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | || ||| || ||||| || | |||| | ||| |||||| |||| |||| Sbjct 916433 GTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAGATGTTGGAGGTGTAAGG 916492 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||| || | ||||| | ||||| |||||| | || | |||||| ||||| ||||| Sbjct 916493 CTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATAGGAGCCAC 916552 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 ||| || ||||| | | || | || ||| || |||||||||| ||||||||| Sbjct 916553 CAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCCCAGTCCCA 916612 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740 || |||| | || || ||| ||| | ||| |||| || || ||| || || Sbjct 916613 CAGATCGGTTGGCTTCTTGCCCCAAAGGTCGAACTGCAAAATACCCTGCGACGCCGGCGA 916672 Query 138741 GCCTTCGTACGAATCGTATACACCAAACTCTTGC-GCCAACTCGTTGCTCGCCTCGAGCG 138799 || || | | |||||| || | | || | |||| |||| ||||| | | Sbjct 916673 TCCCTCAAAGGTCTCGTATTTGCC-ATCCCTAACGGCCAGCTCGGCAGAGGCCTCCAAAG 916731 Query 138800 CACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGT 138859 | || | ||| || || ||| |||||| || ||| || |||||| | || Sbjct 916732 CCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCTCTGGCCTCTGGTGAGTCAA 916791 Query 138860 ACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGC 138919 | |||| | ||| | ||||| |||||||||| || || || ||||| | | || | Sbjct 916792 AAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGGACACCCACGGCAATCGGCC 916851 Query 138920 GATGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTT 138979 | ||||| || || | | |||| || | ||||||||||||| |||||||| | Sbjct 916852 TGTTGCGCATGTTGGATGTTCTTGCCTCTGGAACAGGATAATAGTTTCTGTCGATGATCT 916911 Query 138980 TGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGC 139039 |||| | || ||| ||||| || | || | | ||| || | ||| || Sbjct 916912 TGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTTCGAAGTTGTACCAGC 916971 Query 139040 CCCCGTTGTCGTCGACGACGTCGACAAATTTGTTG--ACACAAATCGAGGCTATGTTGCA 139097 ||||||||| ||| || || || | || | ||||| || | || || Sbjct 916972 TGGTATTGTCGTCG--GAC-TCAACGAA--GGCTGGAAGGGCGATCGACGCCAAATTACA 917026 Query 139098 CACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTT 139157 ||| ||||| || || || ||| |||||||||||| ||||||||| |||| Sbjct 917027 CACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAGCACAAATTAGACGACTT 917086 Query 139158 GATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATA 139217 ||| |||| | || | || ||| | || ||| || || || ||||| ||||| | Sbjct 917087 GATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTCCTTGTACAGCATGAA 917146 Query 139218 CGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACA-AGTCCCTAGCTTG-- 139274 || ||||| |||||| || | ||| | |||| | ||| || | |||| Sbjct 917147 TGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAGCTTCTGTGCCTTGAC 917206 Query 139275 TATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTT 139333 | || || | | | | || ||||| | |||||| || | ||| ||| | Sbjct 917207 CGTCTGGCGTCC---ACGGCCTTCCTTTTCGTATCTGGTGTAGAGCTCCTTGAACTCG-T 917262 Query 139334 CACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGT 139393 | ||||| |||| ||||| | || || | ||| | | |||| ||| | ||| Sbjct 917263 CGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACAGCGTCCACTCAGCGT 917322 Query 139394 TCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACA---AAGCGAACAGCAAATCGC 139450 || || ||| | | ||||||||| || |||||||||| || |||||| || | Sbjct 917323 TCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAG---GTCTC 917379 Query 139451 GCGCCTTCTTATCT--TCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAAAACG 139506 || ||| |||| ||| | ||||| | | || | |||| | || ||||||| Sbjct 917380 TGGC--TCTGATCTCCTCCTTA-CCATGGTTC-TTCCGGATGTCGATAAAGTCAAAAATA 917435 Query 139507 TCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGA 139563 || | ||||||||| || | || | || | ||||| ||| ||||| || || Sbjct 917436 TCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCCCTGG 917495 Query 139564 TCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTT 139623 ||||||| || | | || ||||| || | || ||| || | ||| | | || Sbjct 917496 TCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGTG 917555 Query 139624 CCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCG 139680 |||||||| | | |||| | | | || | || | || || | | | || Sbjct 917556 CCGTTGGTTCCAGCGATGTAAGACCCGGTG---GATCTAATGTTGTGAATGTGCAGACCA 917612 Query 139681 ATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCTCGTATATACCTCT 139739 || || || || ||||| || | | | || || | | || || || || || Sbjct 917613 ATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTG-AGGGTGTCATAGATGCCGTC 917671 Query 139740 TATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCC 139799 ||| |||||||| ||| | |||| || || || || | ||||| | || || Sbjct 917672 GATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTACC 917731 Query 139800 GGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGT 139859 ||| ||||||||| || |||||| ||||| | || || |||||||| | |||||| Sbjct 917732 GGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGT 917791 Query 139860 TTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATG 139919 |||||| |||| ||| || || |||||||| | | || ||||| | ||| || Sbjct 917792 CTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCATGACCATGTG 917851 Query 139920 TTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTC 139977 ||| | ||||| || || || || || ||||| |||| ||| || ||| Sbjct 917852 CTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCG--CTCCAGCGTC 917909 Query 139978 TTGTAGCCAAAGTA 139991 ||| ||||||| || Sbjct 917910 TTGAAGCCAAAATA 917923 Score = 109 bits (120), Expect = 5e-19 Identities = 168/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | ||||| || || || || | || || || | || Sbjct 177563 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCTTCC 177504 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||||||||||||||| ||||| || || Sbjct 177503 GACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCTGACCAG 177444 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||||||| ||||| || || || ||||| |||| | | ||||| || ||| Sbjct 177443 CAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGACTACAAC 177384 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943 || ||||| || || || | || ||||| || || || | || || | ||||||| Sbjct 177383 ATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACTGAGAGGTGGTATCATTGAGCCA 177324 >seq1 Length=1541475 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || ||||||| | ||||| || || || || || || || || || | Sbjct 445974 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445915 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || || ||||| || |||||||| ||||| || || Sbjct 445914 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 445855 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | | || ||||| || || ||||| || || |||| |||| ||||| ||| Sbjct 445854 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445795 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| ||||| | ||| |||| ||| ||||| | || || Sbjct 445794 ATTCAAAAGGAGTCGACCTTGCACCTGGTTTTGAGATTGAGAGGTGG 445748 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || ||||||| | ||||| || || || || || || || || || | Sbjct 445518 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445459 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || || ||||| || |||||||| || || || || Sbjct 445458 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAG 445399 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | | || || || || || || || || || |||| | || || |||||| Sbjct 445398 CAAAGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAAC 445339 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| ||||| | || |||| ||| ||||| | || || Sbjct 445338 ATTCAAAAGGAGTCGACCTTGCATCTGGTTTTGAGATTGAGAGGTGG 445292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897560633960