Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2 140 3e-28
seq1 107 2e-18
>seq2
Length=1516309
Score = 140 bits (154), Expect = 3e-28
Identities = 955/1514 (63%), Gaps = 46/1514 (3%)
Strand=Plus/Plus
Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560
||| | || ||| || ||||| || | |||| | ||| |||||| |||| ||||
Sbjct 916433 GTTGACGATCTGGAACTCACCAGCAAGAACTCTTCTGGAGTAGATGTTGGAGGTGTAAGG 916492
Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620
||| || | ||||| | ||||| |||||| | || | |||||| ||||| |||||
Sbjct 916493 CTCGAAACACTCGTTATATCCCAAAATCTGCGATGTCGACGCGGTTGGCATAGGAGCCAC 916552
Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680
||| || ||||| | | || | || ||| || |||||||||| |||||||||
Sbjct 916553 CAAGAGCGAATTTCTGAGTCCATCCTTCTGGATACGGGCCTTGAGCGAGTCCCAGTCCCA 916612
Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740
|| |||| | || || ||| ||| | ||| |||| || || ||| || ||
Sbjct 916613 CAGATCGGTTGGCTTCTTGCCCCAAAGGTCGAACTGCAAAATACCCTGCGACGCCGGCGA 916672
Query 138741 GCCTTCGTACGAATCGTATACACCAAACTCTTGC-GCCAACTCGTTGCTCGCCTCGAGCG 138799
|| || | | |||||| || | | || | |||| |||| ||||| | |
Sbjct 916673 TCCCTCAAAGGTCTCGTATTTGCC-ATCCCTAACGGCCAGCTCGGCAGAGGCCTCCAAAG 916731
Query 138800 CACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGT 138859
| || | ||| || || ||| |||||| || ||| || |||||| | ||
Sbjct 916732 CCCCGTGGTAGATGGTCTCGAAAATCTGGATGTTCAGCTCTCTGGCCTCTGGTGAGTCAA 916791
Query 138860 ACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGC 138919
| |||| | ||| | ||||| |||||||||| || || || ||||| | | || |
Sbjct 916792 AAGGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGGACACCCACGGCAATCGGCC 916851
Query 138920 GATGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTT 138979
| ||||| || || | | |||| || | ||||||||||||| |||||||| |
Sbjct 916852 TGTTGCGCATGTTGGATGTTCTTGCCTCTGGAACAGGATAATAGTTTCTGTCGATGATCT 916911
Query 138980 TGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGC 139039
|||| | || ||| ||||| || | || | | ||| || | ||| ||
Sbjct 916912 TGTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTTCGAAGTTGTACCAGC 916971
Query 139040 CCCCGTTGTCGTCGACGACGTCGACAAATTTGTTG--ACACAAATCGAGGCTATGTTGCA 139097
||||||||| ||| || || || | || | ||||| || | || ||
Sbjct 916972 TGGTATTGTCGTCG--GAC-TCAACGAA--GGCTGGAAGGGCGATCGACGCCAAATTACA 917026
Query 139098 CACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTT 139157
||| ||||| || || || ||| |||||||||||| ||||||||| ||||
Sbjct 917027 CACGGCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAGCACAAATTAGACGACTT 917086
Query 139158 GATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATA 139217
||| |||| | || | || ||| | || ||| || || || ||||| ||||| |
Sbjct 917087 GATGATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTCCTTGTACAGCATGAA 917146
Query 139218 CGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACA-AGTCCCTAGCTTG-- 139274
|| ||||| |||||| || | ||| | |||| | ||| || | ||||
Sbjct 917147 TGGCGTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCACAGCTTCTGTGCCTTGAC 917206
Query 139275 TATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTT 139333
| || || | | | | || ||||| | |||||| || | ||| ||| |
Sbjct 917207 CGTCTGGCGTCC---ACGGCCTTCCTTTTCGTATCTGGTGTAGAGCTCCTTGAACTCG-T 917262
Query 139334 CACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGT 139393
| ||||| |||| ||||| | || || | ||| | | |||| ||| | |||
Sbjct 917263 CGCCGTACACGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACAGCGTCCACTCAGCGT 917322
Query 139394 TCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACA---AAGCGAACAGCAAATCGC 139450
|| || ||| | | ||||||||| || |||||||||| || |||||| || |
Sbjct 917323 TCTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAG---GTCTC 917379
Query 139451 GCGCCTTCTTATCT--TCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAAAACG 139506
|| ||| |||| ||| | ||||| | | || | |||| | || |||||||
Sbjct 917380 TGGC--TCTGATCTCCTCCTTA-CCATGGTTC-TTCCGGATGTCGATAAAGTCAAAAATA 917435
Query 139507 TCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGA 139563
|| | ||||||||| || | || | || | ||||| ||| ||||| || ||
Sbjct 917436 TCCGAGTGCCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCCCTGG 917495
Query 139564 TCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTT 139623
||||||| || | | || ||||| || | || ||| || | ||| | | ||
Sbjct 917496 TCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGTG 917555
Query 139624 CCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCG 139680
|||||||| | | |||| | | | || | || | || || | | | ||
Sbjct 917556 CCGTTGGTTCCAGCGATGTAAGACCCGGTG---GATCTAATGTTGTGAATGTGCAGACCA 917612
Query 139681 ATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCTCGTATATACCTCT 139739
|| || || || ||||| || | | | || || | | || || || || ||
Sbjct 917613 ATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTG-AGGGTGTCATAGATGCCGTC 917671
Query 139740 TATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCC 139799
||| |||||||| ||| | |||| || || || || | ||||| | || ||
Sbjct 917672 GATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTACC 917731
Query 139800 GGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGT 139859
||| ||||||||| || |||||| ||||| | || || |||||||| | ||||||
Sbjct 917732 GGCATTAAACAGAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGT 917791
Query 139860 TTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATG 139919
|||||| |||| ||| || || |||||||| | | || ||||| | ||| ||
Sbjct 917792 CTCGATGACGCTGGGAATGTCATCGCCATGGATACCAATGGCCACACGCATGACCATGTG 917851
Query 139920 TTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTC 139977
||| | ||||| || || || || || ||||| |||| ||| || |||
Sbjct 917852 CTGGGGTCTCTCGGCGACTTTTCCATCAATCTTCAAGAGATATGACCG--CTCCAGCGTC 917909
Query 139978 TTGTAGCCAAAGTA 139991
||| ||||||| ||
Sbjct 917910 TTGAAGCCAAAATA 917923
Score = 109 bits (120), Expect = 5e-19
Identities = 168/240 (70%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || | ||||| || || || || | || || || | ||
Sbjct 177563 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCTTCC 177504
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||||||||||||||| ||||| || ||
Sbjct 177503 GACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCTGACCAG 177444
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | |||||||| ||||| || || || ||||| |||| | | ||||| || |||
Sbjct 177443 CAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGACTACAAC 177384
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943
|| ||||| || || || | || ||||| || || || | || || | |||||||
Sbjct 177383 ATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACTGAGAGGTGGTATCATTGAGCCA 177324
>seq1
Length=1541475
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || ||||||| | ||||| || || || || || || || || || |
Sbjct 445974 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445915
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || || ||||| || |||||||| ||||| || ||
Sbjct 445914 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 445855
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | | || ||||| || || ||||| || || |||| |||| ||||| |||
Sbjct 445854 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445795
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| ||||| | ||| |||| ||| ||||| | || ||
Sbjct 445794 ATTCAAAAGGAGTCGACCTTGCACCTGGTTTTGAGATTGAGAGGTGG 445748
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || ||||||| | ||||| || || || || || || || || || |
Sbjct 445518 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445459
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || || ||||| || |||||||| || || || ||
Sbjct 445458 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAG 445399
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | | || || || || || || || || || |||| | || || ||||||
Sbjct 445398 CAAAGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAAC 445339
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| ||||| | || |||| ||| ||||| | || ||
Sbjct 445338 ATTCAAAAGGAGTCGACCTTGCATCTGGTTTTGAGATTGAGAGGTGG 445292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897560633960
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