Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 9e-22
seq2 95.1 1e-14
>seq1
Length=1541475
Score = 118 bits (130), Expect = 9e-22
Identities = 166/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 110267 TTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG 110326
|| |||||||| || || || || ||||| ||||||||||| || || | || ||
Sbjct 446208 TTAAAAATGCAGATTTTCGTTAAGACTTTGACCGGCAAAACTATCACTTTAGAGGTAGAA 446149
Query 110327 CCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTG 110386
|| || ||| ||| | || ||| ||||||| || || ||||| | ||
Sbjct 446148 TCTTCTGACACTATCGATAATGTCAAATCGAAGATTCAAGATAAGGAAGGAATCCCTCCT 446089
Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446
|| || |||||||| |||| ||| ||||| ||||| || || | ||||| || | |||
Sbjct 446088 GACCAGCAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGAT 446029
Query 110447 TACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||||||||| ||||| ||||| |||||| |||| | ||| || |||| ||
Sbjct 446028 TACAACATTCAGAAAGAGTCTACCTTGCACTTGGTCCTGAGATTGAGAGGTGG 445976
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || || ||||| || ||||| || ||||| ||| | || ||| |
Sbjct 445746 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445687
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| ||| ||| | || ||| || ||| || ||||| || | || ||||||
Sbjct 445686 GACACTATCGATAATGTGAAATCTAAAATTCAGGATAAAGAGGGTATCCCGCCTGATCAA 445627
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| ||| | |||| || ||||| || || || || | |||||| || | |||||||||
Sbjct 445626 CAGAGATTGATTTTCGCTGGTAAGCAACTCGAAGACGGCAGAACTCTGTCTGATTACAAC 445567
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| ||||| ||||| |||||| |||| | ||| || |||| ||
Sbjct 445566 ATTCAGAAAGAGTCTACCTTGCACCTGGTCCTGAGATTGAGAGGTGG 445520
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || || ||||| || ||||| || ||||| ||| | || ||| |
Sbjct 445974 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445915
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| ||| ||| | || || || ||| || || ||||| | || || ||
Sbjct 445914 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCTCCTGACCAG 445855
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|||||||| |||| ||| ||||| ||||| || || | ||||| || | |||||||||
Sbjct 445854 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445795
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||||| || || || |||||| |||| || ||| || |||| ||
Sbjct 445794 ATTCAAAAGGAGTCGACCTTGCACCTGGTTTTGAGATTGAGAGGTGG 445748
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || || ||||| || || || || ||||| ||| | || ||| |
Sbjct 445290 ATGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445231
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| ||| ||| | || || || ||| || || ||||| | ||| || ||
Sbjct 445230 GACACTATCGATAACGTCAAGTCCAAAATTCAGGATAAGGAAGGAATCCCCCCTGACCAG 445171
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|||||||| |||| ||| ||||| ||||| || || | ||||| || | |||||||||
Sbjct 445170 CAAAGACTCATTTTTGCTGGTAAGCAGCTAGAAGACGGTAGAACTCTGTCCGATTACAAC 445111
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| || |||||||| | || |||| || |||||| |||| ||
Sbjct 445110 ATTCAGAAGGAATCTACTCTTCATTTGGTTTTGAGACTGAGAGGTGG 445064
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || || ||||| || ||||| || ||||| ||| | || ||| |
Sbjct 445518 ATGCAAATTTTCGTTAAAACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAGTCCTCT 445459
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| ||| ||| | || || || ||| || || ||||| | ||| || ||
Sbjct 445458 GACACTATCGATAATGTCAAGTCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGACCAG 445399
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||||||||||||| || ||||| || || || || | ||||| | | || || |||
Sbjct 445398 CAAAGACTTATTTTCGCTGGTAAGCAACTCGAAGACGGTAGAACGTTATCCGACTATAAC 445339
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||||| || || || ||||| |||| || ||| || |||| ||
Sbjct 445338 ATTCAAAAGGAGTCGACCTTGCATCTGGTTTTGAGATTGAGAGGTGG 445292
>seq2
Length=1516309
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
|||||||| || || ||||| || || ||||| || ||||| ||| | || ||| ||
Sbjct 177566 AAAATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCT 177507
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
||| || ||| | || || ||||| ||||||||||| | || ||
Sbjct 177506 TCCGACACCATCGATAACGTCAAGTCCAAGATCCAAGACAAAGAAGGAATCCCTCCTGAC 177447
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| |||||| | || | || ||||| || || ||||| | |||||| | | || |||
Sbjct 177446 CAGCAAAGATTGATCTTCGCCGGTAAGCAACTCGAGGACGGCAGAACCCTTTCAGACTAC 177387
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| |||||||| || || ||||| |||| | |||||| |||| ||
Sbjct 177386 AACATCCAAAAAGAGTCCACTTTGCATTTGGTTCTGAGACTGAGAGGTGG 177337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412841564779451
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |