Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq4 158 2e-32
seq2 114 2e-19
seq6 86.0 1e-10
>seq4
Length=1302532
Score = 158 bits (174), Expect = 2e-32
Identities = 240/336 (71%), Gaps = 13/336 (4%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| | | |||||| ||||| ||| || || ||||| || || | |||
Sbjct 920093 ACCCTCGTCTCTGCAGATCAACTCGTTCGAGAAGGTCAGACCAGGCATCAGTCCTCTCTT 920152
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACT-GCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458
||||||||| ||||| | | |||| ||| ||||| || || ||||| ||||| ||||
Sbjct 920153 CTTGAGCCAGAAGATCG-AGGCAAACGAGCCAGAGAAGAAAATACCCTCCACGGCAGCAA 920211
Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGC--CCTCTTTGTTGATCCACTTCATCGC 794516
| | ||||| | ||||||||| | ||| |||| | ||||||||| |||| ||
Sbjct 920212 ACGCAACGAGTCTCTCGGCAAA-----CAGGGCTTCCTCGTCGTTGATCCATCTCATGGC 920266
Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC--C 794574
||| || ||||| | | | | | || | || || |||||| || ||| || |
Sbjct 920267 CCATTCGGCCTTCTCCTTGATACATGGGATGGTCTCAATGGCGTTGAAAAGGAACTCAGC 920326
Query 794575 TTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATG 794634
||| | ||||||||||||||||||||||| || |||||||| || || |||||||||
Sbjct 920327 TTCCTTA--GGGTCCTTGACGTAGGTGTCGATCAGAAGCGAGTACGTTTCCGAGTGGATG 920384
Query 794635 TTTTCGATGGCGATCTGGAAGCCATAAAAGCAGTTG 794670
|| || || ||||||||| || || || || |||
Sbjct 920385 TTCTCCATCATGATCTGGAACCCGTAGAAACACTTG 920420
Score = 150 bits (166), Expect = 3e-30
Identities = 233/329 (71%), Gaps = 8/329 (2%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
||||||||||||| || ||| || | | |||||| |||||||||||||| | |
Sbjct 919771 TGACGCCCGCCTTCTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTGCCTGCAA 919830
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| |||||| | ||||||||| | | ||||||||||| ||| || |
Sbjct 919831 GAGAGATGTTCTCCATGAAGTCGAACGGGTTTGTGGCGTTGTAGTGCTTCTTGCAGCCCA 919890
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| || |||||| ||||| || || || || | |||||||||||| ||| | |||||
Sbjct 919891 GAGATAAAAGCAGCCGGTCAGCAACAAACTCCACGTACTGGCACATCAGGTTGCAGTTCA 919950
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTG-ACAAACTCTTTCTCGATCTCGACGGCC 794129
| || | || || ||||| | ||| || | | |||||| |||||||||||||||
Sbjct 919951 TACCCAGCAGGTTGACAGGCAGGGCGTCGGTGAAGTATCTCTTT-TCGATCTCGACGGCC 920009
Query 794130 TCGATGATGATCTGCCTGGGCAC---GTCGGACGACGGCTTGTCGACGAGCATCGTGTAG 794186
||| ||||||||| || |||| |||| || ||| | ||| || | ||
Sbjct 920010 TCGGTGATGATCT---TGAGCACGATGTCGCTGTTTGGGGTGTTGTTGAGGTGCGAGAAG 920066
Query 794187 AGCAGGCAGGCAAAGTCGCAATGCAGACC 794215
||||| |||||||||||| |||||||||
Sbjct 920067 AGCAGACAGGCAAAGTCGGTATGCAGACC 920095
>seq2
Length=1516309
Score = 114 bits (126), Expect = 2e-19
Identities = 186/265 (70%), Gaps = 2/265 (1%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| || | || |||| ||| || || | | ||| || | | |||||||||
Sbjct 917492 CTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGA 917551
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCG-GCAAAGC 2073658
| ||||||||| || || | ||| | || | || | | ||||| | ||| | |
Sbjct 917552 CGTGCCGTTGGTTCCAGCGATGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGA-C 917610
Query 2073659 CGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCT 2073718
| ||||| || || ||||||||||| || || || | || || || || |||||||| |
Sbjct 917611 CAATGCCTCCAGCAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGT 917670
Query 2073719 CGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGC 2073778
|||| |||||| |||||||| | | || || || || || | ||||| | | || |
Sbjct 917671 CGATGGAGTCGTCCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTAC 917730
Query 2073779 CGGCATTGAAGAGCGTGGGCGTCGC 2073803
||||||| || || || |||| |||
Sbjct 917731 CGGCATTAAACAGAGTTGGCGACGC 917755
>seq6
Length=996047
Score = 86.0 bits (94), Expect = 1e-10
Identities = 155/224 (69%), Gaps = 2/224 (1%)
Strand=Plus/Minus
Query 431034 GGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATGTTTCTGCACATG 431093
|| |||||||||||||| | | ||| |||| ||| |||| | | | |||
Sbjct 771851 GGGTTTGTGCGCAACTCTTTCTTTTCCGGGCTCAGTCCGCCCGAGTTCCTGTTCCACGCC 771792
Query 431094 ATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAGACGGGCTACATC 431153
||| ||| | ||||| || || || ||||| |||||||| || ||||||||||||| |
Sbjct 771791 ATCTCCGGCAGAGAGGGGCTAGTGGATACGGCTGTCAAGACCGCAGAGACGGGCTACACC 771732
Query 431154 CAGCGTCGGTGCATCAAATCGATGGAGAGCCTGCAGATCAAGC-GCGGCGGCCTCGTGCG 431212
||| ||| || || ||||||||| |||| || | || || || ||||||
Sbjct 771731 TCGCGGCGGCTGATGAAGTCGATGGAGGACCTG-AGTGCCGGCTACGACGAGACCGTGCG 771673
Query 431213 CAACGCCAACGGCGACATTGTCCAGTTTGCCTATGGCGGCGACG 431256
|||| | | | || ||| || ||||| |||||| |||||||
Sbjct 771672 CAACTCGAGCAACGGCATCGTGCAGTTCAACTATGGAGGCGACG 771629
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916245655378073
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |