Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 6e-30
seq2 113 3e-20
>seq1
Length=1541475
Score = 145 bits (160), Expect = 6e-30
Identities = 177/239 (74%), Gaps = 2/239 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | ||| ||||| || | || || ||||| |||||||| ||||| |
Sbjct 445976 CCACCTCTCAATCTCAGGACCAAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGAC 446035
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || || || || |||||| | || | ||||||||| || || ||
Sbjct 446036 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 446095
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || || ||||| ||| || | ||||||| | || | |||||||||| ||||||
Sbjct 446096 ATTCCTTCCTTATCTTG-AATCTTCGATTTGACATTATCGATAGTGTCAGAAGATTCTAC 446154
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAACGTA 29797
|| | ||| ||||||||||| || || || ||||| || ||||||||||| || ||||
Sbjct 446155 CTCTAAAGTGATAGTTTTGCCGGTCAAAGTCTTAACGAAAATCTGCATTTTTAAGCGTA 446213
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | ||| |||| || | || || ||||| |||||||| ||||| |
Sbjct 445520 CCACCTCTCAATCTCAGGACCAGGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCAGAC 445579
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | || |||||||| || ||||| | |||||||| || ||||| |||||
Sbjct 445580 AGAGTTCTGCCGTCTTCGAGTTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGCGGG 445639
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||||||||| || || |||||| | ||| ||| | || | ||||||||| || ||
Sbjct 445640 ATACCCTCTTTATCCTG-AATTTTAGATTTCACATTATCGATAGTGTCAGAGGACTCAAC 445698
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || || || ||||||||||| || || |||||
Sbjct 445699 CTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445746
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || |||| | || ||||||||||| || ||||| || |||||||| ||||| |
Sbjct 445064 CCACCTCTCAGTCTCAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGAC 445123
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || || || || |||||| | || | ||||||||| || || ||
Sbjct 445124 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGG 445183
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || || || || |||||| | ||||| | || | ||||||||| || ||
Sbjct 445184 ATTCCTTCCTTATCCTG-AATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAAC 445242
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || ||||| ||||||||||| || || |||||
Sbjct 445243 CTCAAGGGTGATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 445290
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || |||| ||| | || || || |||||||||||||| || |
Sbjct 445292 CCACCTCTCAATCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGAT 445351
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || |||||||| || ||||| | || | ||||||||| || || ||
Sbjct 445352 AACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGG 445411
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || || ||||| |||||| | |||||| | || | ||||||||| || ||
Sbjct 445412 ATTCCTTCCTTATCTTG-AATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAAC 445470
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || || || ||||||||||| || || |||||
Sbjct 445471 CTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445518
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || |||| || | || || || ||||||||||| ||||| |
Sbjct 445748 CCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGAC 445807
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || || || || |||||| | || | ||||||||| || || ||
Sbjct 445808 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 445867
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || || ||||| |||||| | |||||| | || | ||||||||| || ||
Sbjct 445868 ATTCCTTCCTTATCTTG-AATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAAC 445926
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || || || ||||||||||| || || |||||
Sbjct 445927 CTCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCAT 445974
>seq2
Length=1516309
Score = 113 bits (124), Expect = 3e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || |||| | ||| |||||||| | ||||| |||||||| ||||| || || | |
Sbjct 177337 CCACCTCTCAGTCTCAGAACCAAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAA 177396
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | || |||||||| || || || | |||||||||||||| || || ||
Sbjct 177397 AGGGTTCTGCCGTCCTCGAGTTGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGG 177456
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | || ||||| | || | ||||| ||| || ||
Sbjct 177457 ATTCCTTCTTTGTCTTGGATCTTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACC 177516
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| | || || || || || || ||||| || || || |||||||||||
Sbjct 177517 TCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCATTTT 177566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219167135987
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |