Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 4e-21
>seq1
Length=1541475
Score = 116 bits (128), Expect = 4e-21
Identities = 154/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 137258
|||||| ||||||| |||||||| || || |||||||||||| || || || |||
Sbjct 445078 CAAAACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTC 445137
Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318
||| || || ||||||||| | || || | |||||| || || || || ||||| || ||
Sbjct 445138 TTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGGGGGATTCCTTCCTTATC 445197
Query 137319 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGT 137378
|||||| || | | || | ||||| | || || || |||| || | ||
Sbjct 445198 CTGAATTTTGGACTTGACGTTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGT 445257
Query 137379 CTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
||| || ||||| ||||| ||||| |||||||||
Sbjct 445258 CTTTCCAGTCAAGGTTTTAACGAAAATTTGCATA 445291
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| |||| || | |||||| | || | || || || ||||| |||||||||||| |
Sbjct 445748 CCACCTCTCAATCTCAAAACCAGGTGCAAGGTCGACTCCTTTTGAATGTTGTAATCGGAC 445807
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || || |||||| || || ||||||||| | || || | |||||| || |||||
Sbjct 445808 AGAGTTCTACCGTCTTCTAGCTGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGG 445867
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| ||||| || || |||||| || | | || | ||||| | || || ||
Sbjct 445868 ATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACC 445927
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|||| || | ||||| |||||||| ||||| ||||| |||||||||
Sbjct 445928 TCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCATA 445975
Score = 105 bits (116), Expect = 7e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
||||| ||||| || ||||||||||| || || || |||||||||||| ||||||
Sbjct 445550 GTAGACTCTTTCTGAATGTTGTAATCAGACAGAGTTCTGCCGTCTTCGAGTTGCTTACCA 445609
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
|| | |||| | || ||||| || || || || ||||| || |||||| |||
Sbjct 445610 GCGAAAATCAATCTCTGTTGATCAGGCGGGATACCCTCTTTATCCTGAATTTTAGATTTC 445669
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | || | ||||| | || || || |||| || | ||||| |||||||| |||
Sbjct 445670 ACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGGTT 445729
Query 137395 TTTACGAATATTTGCATA 137412
|| ||||| |||||||||
Sbjct 445730 TTAACGAAAATTTGCATA 445747
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
||||| ||||| || |||||||||||| || || || |||||| || || ||||||
Sbjct 446006 GTAGACTCTTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCTAGCTGCTTACCA 446065
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
||| | || || | |||||| || ||||| || ||||| || || ||| || |||
Sbjct 446066 GCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGAATCTTCGATTTG 446125
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | || | ||||| | | |||||| || | ||| | || ||||||||||| ||
Sbjct 446126 ACATTATCGATAGTGTCAGAAGATTCTACCTCTAAAGTGATAGTTTTGCCGGTCAAAGTC 446185
Query 137395 TTTACGAATATTTGCAT 137411
|| ||||| || |||||
Sbjct 446186 TTAACGAAAATCTGCAT 446202
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| |||| || | |||||| | ||| | || || || ||||| ||||| || |||
Sbjct 445292 CCACCTCTCAATCTCAAAACCAGATGCAAGGTCGACTCCTTTTGAATGTTATAGTCGGAT 445351
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || || |||||||||||| |||||||| | || || | |||||| || || ||
Sbjct 445352 AACGTTCTACCGTCTTCGAGTTGCTTACCAGCGAAAATAAGTCTTTGCTGGTCAGGGGGG 445411
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| ||||| || || |||||| || | | || | ||||| | || || ||
Sbjct 445412 ATTCCTTCCTTATCTTGAATTTTGGACTTGACATTATCGATAGTGTCAGAGGACTCAACC 445471
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|||| || | ||||| |||||||| ||||| ||||| |||||||||
Sbjct 445472 TCAAGGGTGATGGTCTTTCCGGTCAAGGTTTTAACGAAAATTTGCATA 445519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543957252400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |