Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17] 7 sequences; 8,974,371 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2 205 9e-48 seq7 113 4e-20 seq1 111 2e-19 >seq2 Length=1516309 Score = 205 bits (226), Expect = 9e-48 Identities = 750/1158 (65%), Gaps = 41/1158 (4%) Strand=Plus/Plus Query 148620 GGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGG 148679 |||| | |||| ||| ||| ||||||| |||||||| || |||||| |||| |||| | Sbjct 916794 GGCAGTCTCAGCTGCATGAACACGTCGGCCAGGCCCTGGACACCCACGGCAATCGGCCTG 916853 Query 148680 TGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATGATCTT 148738 | |||||||| | || |||| || | ||||| | ||| | |||||||||||| Sbjct 916854 TTGCGCATGTTGGATGTTCTTGC-CTCTGGAACAGGATAATAGTTTCTGTCGATGATCTT 916912 Query 148739 GTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTAC----- 148793 || || || || ||||| || || | ||||| ||| || | |||| Sbjct 916913 GTTGAGGTTCTTAGTGACAACCTTGGTGATCTGGTGCAGCTTTTCGAAGTTGTACCAGCT 916972 Query 148794 ----TTGTCATCTACGATGCATCG---GTTC--ACGGCGATAGAGGCTAGATTGCACACG 148844 ||||| || || || || | | | |||||| || || | ||| |||||| Sbjct 916973 GGTATTGTCGTCG--GACTCAACGAAGGCTGGAAGGGCGATCGACGCCAAATTACACACG 917030 Query 148845 GCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATC 148904 ||| ||| || || | |||||| || || ||| ||||| ||| | ||||| Sbjct 917031 GCCACCTCCTCTGGAGATGAGTACTCGACAATTTCGCAGCACAAATTAGACGACTTGATG 917090 Query 148905 ACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGT 148964 | || | |||||| || ||| ||||| |||||| |||||||||||||||||| | || Sbjct 917091 ATACCAAGGTTCTTCTGGTTGGTCTTGGAGTTGCAGGCGTCCTTGTACAGCATGAATGGC 917150 Query 148965 CCGCCAGTTTCCACCTGCGTTTCCACTATGA---ACCGATGCAGGTCCTGCGCGCGCACT 149021 ||| |||||| ||| | |||| ||| ||| ||| | ||| || || Sbjct 917151 GTGCCTGTTTCCGTCTGGGCCTCCAAAATGGCGTACCA---CAGCTTCTGTGCCTTGACC 917207 Query 149022 TGCTGCTCGTAG-CGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCC 149080 ||| ||| || || |||| |||||| || || ||| || |||| | ||||| Sbjct 917208 GTCTGG-CGTCCACGGCCTTCCTTTTCGTATCTGGTGTAGAGCTCCTTGAACTCGTCGCC 917266 Query 149081 GTAGCAATCGTCG---AGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTC 149137 ||| || ||||| || || || || | || | | |||| |||| | ||| Sbjct 917267 GTA-CA--CGTCGGAAAGCCCTGGAGCCTCGGAAGGCGAGAACAGCGTCCACTCAGCGTT 917323 Query 149138 CGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGC 149197 | | || | || ||| ||||| || || | ||| ||||| | ||||| | || Sbjct 917324 CTGCTCGACTCTCTCCATGAACAGGTCTGGAATCCACAGCGCAGGGAACAGGTCTCTGGC 917383 Query 149198 CTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTG 149257 || || || || ||| || | || || | | || || |||| ||| Sbjct 917384 TCTGATCTCCTCCTTACCATGGTTCTTCCGGATGTCGATAAAGTCAAAAATATCCGAGTG 917443 Query 149258 CCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCGCCCTGGTCGACGTG 149314 ||| ||||||| ||||| || | |||||| |||||| || ||||||||||||| Sbjct 917444 CCATGGCTCAACGTACAGAGCAAACGCGCCAGGCCGCTTGTTGCCTCCCTGGTCGACGTA 917503 Query 149315 GCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGT 149374 | | ||||||| ||||||| ||||| || ||||| ||| |||||||| || Sbjct 917504 TCTGGCGGTGTTGTTGAACACTCTCACCATTGGAATGATGCCGTTGGACGTGCCGTTGGT 917563 Query 149375 AG-AGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGC 149433 ||| | || | ||| | || | ||||| | || | || ||||| || Sbjct 917564 TCCAGCGA-TGTAAGACCCGGTGGATCTAATGTTGTGAATGTGCAGACCAATGCCTCCAG 917622 Query 149434 CGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGC 149493 | ||| ||||| || ||| ||| || |||||||| |||||| |||| Sbjct 917623 CAGCCTTGGAGATCAGAGCACAGGTCTTGAGGGTGTCATAGATGCCGTCGATGGAGTCGT 917682 Query 149494 GCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACA 149553 |||||||| | || || || || |||| |||||| | | || ||||| |||| Sbjct 917683 CCTTCATGGCAACCAAGAAACAGGAAGACATCTGCGGATGAGGAGTACCGGCATTAAACA 917742 Query 149554 TGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGC 149613 || || ||||| || || |||| || ||||| | ||||| ||||| |||| Sbjct 917743 GAGTTGGCGACGCGTGGGTGAAGAATTTTTGCGACATCAGGTTGTACGTCTCGATGACGC 917802 Query 149614 GGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCT 149673 | ||||||||||||||||| || ||||| || ||||| | ||| ||||| |||| || Sbjct 917803 TGGGAATGTCATCGCCATGGATACCAATGGCCACACGCATGACCATGTGCTGGGGTCTCT 917862 Query 149674 CCGCCACTTTGTTTCCAATTTTGAGCAAGTA--GCCGTTTTCTAGTGTCTTGTAGCCAAA 149731 | || ||||| |||| || | | || ||| || || |||||| ||||||| Sbjct 917863 CGGCGACTTTTCCATCAATCTTCAAGAGATATGACCG--CTCCAGCGTCTTGAAGCCAAA 917920 Query 149732 GTACTTGTAGTCAAAGTC 149749 || ||||| |||||| Sbjct 917921 ATAGTTGTACGAAAAGTC 917938 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||||||||||| || || ||||| || | || ||||||||| Sbjct 177358 AAATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCTGAAAGGGTTCTGCCGTCCTCGAGT 177417 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| | || | | |||||||| |||||||| ||||| ||||| |||| Sbjct 177418 TGCTTACCGGCGAAGATCAATCTTTGCTGGTCAGGAGGGATTCCTTCTTTGTCTTGGATC 177477 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | ||||||| | ||| || || | ||||| ||| || ||| Sbjct 177478 TTGGACTTGACGTTATCGATGGTGTCGGAAGACTCGACCTCCAAGGTGATGGTCTTTCCG 177537 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || |||||||||||||| Sbjct 177538 GTCAAGGTCTTGACGAAAATCTGCAT 177563 >seq7 Length=988507 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| || | || ||||||||||||||| || Sbjct 50107 GTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCGAGCTGCTTACCA 50166 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| || | |||||||| || ||||| || |||||||| |||||| |||| Sbjct 50167 GCGAAAATCAGTCTTTGCTGGTCAGGTGGGATTCCCTCCTTGTCCTGGATCTTGGACTTG 50226 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||||| | |||||| |||| ||||| || || |||||||| || Sbjct 50227 ACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCGGTCAGGGTC 50286 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 50287 TTGACGAAGATTTGCAT 50303 >seq1 Length=1541475 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| ||||||||||| || ||||||||| || || ||| || ||| Sbjct 445997 AAGTGCAAGGTAGACTCTTTCTGAATGTTGTAATCGGACAGAGTTCTACCGTCTTCTAGC 446056 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || ||||||| | |||||||| |||||||| |||||||| || ||| Sbjct 446057 TGCTTACCAGCAAAAATGAGTCTTTGCTGGTCAGGAGGGATTCCTTCCTTATCTTGAATC 446116 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || |||| | || | ||||| | | || || || | |||| ||||||||| Sbjct 446117 TTCGATTTGACATTATCGATAGTGTCAGAAGATTCTACCTCTAAAGTGATAGTTTTGCCG 446176 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||| || |||||||||||||| Sbjct 446177 GTCAAAGTCTTAACGAAAATCTGCAT 446202 Score = 82.4 bits (90), Expect = 7e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||||||||| || |||||||| || || ||| ||||| ||||| || Sbjct 445549 GGTAGACTCTTTCTGAATGTTGTAATCAGACAGAGTTCTGCCGTCTTCGAGTTGCTTACC 445608 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CT 133581 ||| |||| | | ||| || || || ||||| || || || || ||| ||| | | Sbjct 445609 AGCGAAAATCAATCTCTGTTGATCAGGCGGGATACCCTCTTTATC-CTGAATTTTAGATT 445667 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| | || ||| || || | ||||| ||| || ||||||| | Sbjct 445668 TCACATTATCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAGG 445727 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| |||||||| ||||| Sbjct 445728 TTTTAACGAAAATTTGCAT 445746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420757700680