Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20polymorpha_20[genbank_20GCA_5F001664045.1_202016-06-17]
7 sequences; 8,974,371 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 3e-14
seq3 93.3 1e-13
>seq1
Length=1541475
Score = 95.1 bits (104), Expect = 3e-14
Identities = 132/182 (73%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368
||||||| || ||||| ||| ||||||| | ||||| || |||||||||||||
Sbjct 1159430 CATTTGATGGATGATGATCCCGTTTTGTTCAACCGTCAACCGTCTTTGCATAAAATGTCC 1159489
Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAA--TGTAAGTG 305426
||||||||||||| ||| || || | || | || ||| || | || ||| |||
Sbjct 1159490 ATGATGGCTCATAGAGTGAAGGTCATGCCTTACTCCACGTTTAGAATGAATTTGTCTGTG 1159549
Query 305427 -CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485
| | |||||||||| || ||||| ||||| || || |||||| ||||||| || ||
Sbjct 1159550 ACCT---CGCCTTATAACGCCGATTTCGATGGTGACGAGATGAATCTGCATGTTCCGCAG 1159606
Query 305486 TC 305487
||
Sbjct 1159607 TC 1159608
>seq3
Length=1363476
Score = 93.3 bits (102), Expect = 1e-13
Identities = 149/212 (70%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 110677 CAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAG 110736
|||| |||||||| || ||| | |||||| ||| ||| ||||| || ||| ||||||
Sbjct 658852 CAAC-GGACTTGTGCCTATGATTCAAGTCTTTAACAGCACCGCAAAGTACGTGGATCAAG 658910
Query 110737 GTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATAT 110793
|||| ||| ||| ||| | ||| || ||| | || || |||||| |||| | |
Sbjct 658911 GTGGAAATAAAAGACCAGGCGCTTTTTGCATGTATTTAGAGCCGTGGCATGCAGACGTGT 658970
Query 110794 TTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTAT 110853
|||| ||| | || | | ||||| || ||| |||||| | || | |||||||
Sbjct 658971 TTGAGTTCCTGGACTTGAGGAAAAACCATGGAAAGGAAGAAACTCGCGCTAGAGATTTAT 659030
Query 110854 TTTATGCAATGTGGATTTCAGATTTATTCATG 110885
||||||| | ||||| ||||||| || |||
Sbjct 659031 TTTATGCTCTTTGGATACCAGATTTGTTTATG 659062
Score = 93.3 bits (102), Expect = 1e-13
Identities = 190/269 (71%), Gaps = 15/269 (6%)
Strand=Plus/Plus
Query 113178 GAAGTGAAAAACTCCATTATTGCTAATC-AAGGTTCGGTTCAA--CATCTAAA--ATTGC 113232
||| |||||||| ||| || | ||| |||| || || ||| |||| ||| ||| |
Sbjct 660014 GAAATGAAAAACGAAATTGTT-CGAATGGAAGGATCCGTCCAAGCCATCGAAAGCATT-C 660071
Query 113233 CTGATTGCGTGAAAGATGTATTTAAGACTATTTGGGAAATTAAGCAACGTGTCGTAATTG 113292
||| | | || || ||| ||| || ||||||||||| ||||||| | | || |
Sbjct 660072 CTGCCGACATCAAGGAAATATATAAAACGGTTTGGGAAATTCAGCAACGAGCACTTATAG 660131
Query 113293 ATATGGCTGCAGATCGTGGCAAGTTTATCGATCAATCTCAGTCGATGAACTTATTTATGC 113352
||||||||||||| |||| ||| || || || || ||| |||||| |||| |||
Sbjct 660132 ATATGGCTGCAGACCGTGCTCCGTTCATTGACCAGTCCCAGAGCATGAACCTATTCATG- 660190
Query 113353 CGGACACCTCACCAGAT--AAGGTGA-CATC-TGCTCTATTTTACGGCTGGAAAAAAGGT 113408
|||| | | |||| | || ||| || | ||| | ||||| | ||||| | |||
Sbjct 660191 CGGA-ATCCGACCATGTCCAAACTGACCAGCATGCAC--TTTTATGCATGGAAGAGAGGG 660247
Query 113409 TTAAAAACAGGTATGTATTATTTGCGAAC 113437
|| |||||||| || ||||||||||||||
Sbjct 660248 TTGAAAACAGGCATCTATTATTTGCGAAC 660276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812693557727
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |